ATPases associated with a variety of cellular activities
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G56220 AT5G56220 |
| fragaria_vesca | FvH4_3g41580 |
| malus_domestica | MD11G1046300.v1.1 |
| prunus_persica | Prupe.6G035600_v2.0.a1 |
| pyrus_communis | pycom11g03770 |
| rosa_chinensis | RchiOBHm_Chr5g0074571 |
| rosa_laevigata | RLG00000036488 |
| rosa_multiflora | Rmu_co8486051.1_g000001 Rmu_sc0028537.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00006990 |
| rosa_rugosa | Rorug05G0432800 |
| rosa_samantha | Rh5AG489900 Rh5BG510800 Rh5CG534600 Rh5DG523300 |
| rosa_wichuraiana | Rw5G045420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2401 |
| AccB1I | GGYRCC | 2 cut(s) | 2156, 2730 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1409, 2779 |
| AccII | CGCG | 1 cut(s) | 2359 |
| AciI | CCGC | 4 cut(s) | 2202, 2220, 2859, 2874 |
| AclWI | GGATC | 6 cut(s) | 1710, 1711, 2126, 2383, 2396, 2746 |
| AcoI | YGGCCR | 3 cut(s) | 3, 583, 1183 |
| AcsI | RAATTY | 8 cut(s) | 1315, 1433, 1528, 1575, 1598, 1777, 1875, 1886 |
| AcuI | CTGAAG | 5 cut(s) | 239, 1110, 1212, 2058, 2337 |
| AfaI | GTAC | 6 cut(s) | 569, 677, 1244, 1337, 1460, 2685 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 552, 906, 1307, 1409, 2509, 2779 |
| AflIII | ACRYGT | 1 cut(s) | 2790 |
| AhlI | ACTAGT | 1 cut(s) | 749 |
| AjiI | CACGTC | 1 cut(s) | 2803 |
| AjnI | CCWGG | 4 cut(s) | 639, 1402, 2159, 2834 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1520, 1552, 2164, 2196 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 776, 808 |
| Alw21I | GWGCWC | 2 cut(s) | 317, 639 |
| AlwI | GGATC | 6 cut(s) | 1710, 1711, 2126, 2383, 2396, 2746 |
| AoxI | GGCC | 7 cut(s) | 3, 279, 520, 583, 839, 1183, 2622 |
| ApeKI | GCWGC | 8 cut(s) | 135, 977, 1048, 1792, 2204, 2444, 2848, 2948 |
| ApoI | RAATTY | 8 cut(s) | 1315, 1433, 1528, 1575, 1598, 1777, 1875, 1886 |
| AseI | ATTAAT | 1 cut(s) | 1248 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 815, 1315 |
| AspLEI | GCGC | 2 cut(s) | 606, 2359 |
| AspS9I | GGNCC | 4 cut(s) | 279, 521, 839, 2622 |
| AsuC2I | CCSGG | 2 cut(s) | 982, 1637 |
| AsuHPI | GGTGA | 2 cut(s) | 189, 2888 |
| AsuII | TTCGAA | 1 cut(s) | 1579 |
| BalI | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| BamHI | GGATCC | 1 cut(s) | 2388 |
| BanI | GGYRCC | 2 cut(s) | 2156, 2730 |
| BanII | GRGCYC | 4 cut(s) | 317, 639, 912, 1278 |
| BauI | CACGAG | 1 cut(s) | 2555 |
| BbsI | GAAGAC | 2 cut(s) | 851, 2328 |
| Bbv12I | GWGCWC | 2 cut(s) | 317, 639 |
| BbvCI | CCTCAGC | 2 cut(s) | 551, 1863 |
| BbvI | GCAGC | 8 cut(s) | 147, 964, 1035, 1804, 2216, 2431, 2835, 2960 |
| BccI | CCATC | 8 cut(s) | 98, 220, 899, 1169, 1252, 1459, 2340, 2406 |
| BceAI | ACGGC | 2 cut(s) | 342, 2081 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2830, 2864 |
| BciT130I | CCWGG | 4 cut(s) | 641, 1404, 2161, 2836 |
| BclI | TGATCA | 2 cut(s) | 1746, 1830 |
| BcnI | CCSGG | 2 cut(s) | 982, 1637 |
| BcuI | ACTAGT | 1 cut(s) | 749 |
| BfmI | CTRYAG | 1 cut(s) | 868 |
| BfuAI | ACCTGC | 1 cut(s) | 2401 |
| BisI | GCNGC | 8 cut(s) | 136, 978, 1049, 1793, 2205, 2445, 2849, 2949 |
| BlpI | GCTNAGC | 1 cut(s) | 1910 |
| BlsI | GCNGC | 8 cut(s) | 137, 979, 1050, 1794, 2206, 2446, 2850, 2950 |
| BmcAI | AGTACT | 1 cut(s) | 677 |
| Bme1390I | CCNGG | 6 cut(s) | 641, 982, 1404, 1637, 2161, 2836 |
| BmgBI | CACGTC | 1 cut(s) | 2803 |
| BmgT120I | GGNCC | 4 cut(s) | 279, 521, 839, 2622 |
| BmiI | GGNNCC | 6 cut(s) | 578, 1401, 2158, 2275, 2390, 2732 |
| BmrFI | CCNGG | 6 cut(s) | 641, 982, 1404, 1637, 2161, 2836 |
| BmrI | ACTGGG | 1 cut(s) | 846 |
| BmsI | GCATC | 6 cut(s) | 35, 1543, 1774, 1807, 2040, 2633 |
| BmuI | ACTGGG | 1 cut(s) | 846 |
| BpiI | GAAGAC | 2 cut(s) | 851, 2328 |
| BpmI | CTGGAG | 4 cut(s) | 623, 976, 2623, 2849 |
| Bpu10I | CCTNAGC | 3 cut(s) | 551, 1863, 2237 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1910 |
| Bpu14I | TTCGAA | 1 cut(s) | 1579 |
| BpuEI | CTTGAG | 6 cut(s) | 437, 653, 1691, 2122, 2708, 2937 |
| BpuMI | CCSGG | 2 cut(s) | 982, 1637 |
| BsaAI | YACGTR | 1 cut(s) | 2791 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1829 |
| BsaI | GGTCTC | 4 cut(s) | 149, 352, 1743, 2825 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 776, 806 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 552, 906, 1307, 1409, 2509, 2779 |
| Bse118I | RCCGGY | 2 cut(s) | 1807, 2232 |
| Bse1I | ACTGG | 9 cut(s) | 348, 841, 959, 1179, 1301, 1434, 2392, 2732, 2832 |
| Bse3DI | GCAATG | 2 cut(s) | 1794, 1827 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1829 |
| BseBI | CCWGG | 4 cut(s) | 641, 1404, 2161, 2836 |
| BseGI | GGATG | 5 cut(s) | 16, 1546, 2387, 2398, 2788 |
| BseJI | GATNNNNATC | 1 cut(s) | 1829 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 552, 906, 1307, 1409, 2509, 2779 |
| BseMI | GCAATG | 2 cut(s) | 1794, 1827 |
| BseNI | ACTGG | 9 cut(s) | 348, 841, 959, 1179, 1301, 1434, 2392, 2732, 2832 |
| BseRI | GAGGAG | 7 cut(s) | 48, 568, 797, 1248, 1604, 1880, 2541 |
| BseXI | GCAGC | 8 cut(s) | 147, 964, 1035, 1804, 2216, 2431, 2835, 2960 |
| BseYI | CCCAGC | 1 cut(s) | 2920 |
| BsgI | GTGCAG | 3 cut(s) | 450, 2579, 2908 |
| Bsh1236I | CGCG | 1 cut(s) | 2359 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2574 |
| BshFI | GGCC | 7 cut(s) | 5, 281, 522, 585, 841, 1185, 2624 |
| BshNI | GGYRCC | 2 cut(s) | 2156, 2730 |
| BsiEI | CGRYCG | 1 cut(s) | 2574 |
| BsiHKAI | GWGCWC | 2 cut(s) | 317, 639 |
| BsiSI | CCGG | 4 cut(s) | 981, 1636, 1808, 2233 |
| BslFI | GGGAC | 4 cut(s) | 482, 1145, 1584, 1652 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 552, 906, 1307, 1409, 2509, 2779 |
| BsmFI | GGGAC | 4 cut(s) | 482, 1145, 1584, 1652 |
| BsmI | GAATGC | 4 cut(s) | 1154, 1607, 2148, 2519 |
| BsnI | GGCC | 7 cut(s) | 5, 281, 522, 585, 841, 1185, 2624 |
| Bso31I | GGTCTC | 4 cut(s) | 149, 352, 1743, 2825 |
| Bsp119I | TTCGAA | 1 cut(s) | 1579 |
| Bsp1286I | GDGCHC | 4 cut(s) | 317, 639, 912, 1278 |
| Bsp1407I | TGTACA | 1 cut(s) | 567 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1910 |
| Bsp19I | CCATGG | 3 cut(s) | 6, 69, 580 |
| BspACI | CCGC | 4 cut(s) | 2202, 2220, 2859, 2874 |
| BspANI | GGCC | 7 cut(s) | 5, 281, 522, 585, 841, 1185, 2624 |
| BspFNI | CGCG | 1 cut(s) | 2359 |
| BspHI | TCATGA | 1 cut(s) | 912 |
| BspLI | GGNNCC | 6 cut(s) | 578, 1401, 2158, 2275, 2390, 2732 |
| BspMI | ACCTGC | 1 cut(s) | 2401 |
| BspPI | GGATC | 6 cut(s) | 1710, 1711, 2126, 2383, 2396, 2746 |
| BspQI | GCTCTTC | 3 cut(s) | 258, 2034, 2874 |
| BspT104I | TTCGAA | 1 cut(s) | 1579 |
| BspT107I | GGYRCC | 2 cut(s) | 2156, 2730 |
| BspTNI | GGTCTC | 4 cut(s) | 149, 352, 1743, 2825 |
| BsrDI | GCAATG | 2 cut(s) | 1794, 1827 |
| BsrFI | RCCGGY | 2 cut(s) | 1807, 2232 |
| BsrGI | TGTACA | 1 cut(s) | 567 |
| BsrI | ACTGG | 9 cut(s) | 348, 841, 959, 1179, 1301, 1434, 2392, 2732, 2832 |
| BssAI | RCCGGY | 2 cut(s) | 1807, 2232 |
| BssSI | CACGAG | 1 cut(s) | 2555 |
| BssT1I | CCWWGG | 8 cut(s) | 6, 69, 275, 580, 1721, 1767, 2448, 2943 |
| Bst2BI | CACGAG | 1 cut(s) | 2555 |
| Bst2UI | CCWGG | 4 cut(s) | 641, 1404, 2161, 2836 |
| Bst4CI | ACNGT | 5 cut(s) | 369, 405, 1803, 2458, 2914 |
| Bst6I | CTCTTC | 8 cut(s) | 9, 258, 821, 1075, 2034, 2196, 2303, 2874 |
| BstAUI | TGTACA | 1 cut(s) | 567 |
| BstBAI | YACGTR | 1 cut(s) | 2791 |
| BstBI | TTCGAA | 1 cut(s) | 1579 |
| BstC8I | GCNNGC | 4 cut(s) | 843, 2220, 2234, 2861 |
| BstDSI | CCRYGG | 5 cut(s) | 6, 69, 358, 580, 2734 |
| BstEII | GGTNACC | 1 cut(s) | 1222 |
| BstF5I | GGATG | 5 cut(s) | 16, 1546, 2387, 2398, 2788 |
| BstFNI | CGCG | 1 cut(s) | 2359 |
| BstHHI | GCGC | 2 cut(s) | 606, 2359 |
| BstMCI | CGRYCG | 1 cut(s) | 2574 |
| BstNI | CCWGG | 4 cut(s) | 641, 1404, 2161, 2836 |
| BstNSI | RCATGY | 1 cut(s) | 1645 |
| BstPI | GGTNACC | 1 cut(s) | 1222 |
| BstSCI | CCNGG | 6 cut(s) | 639, 980, 1402, 1635, 2159, 2834 |
| BstSFI | CTRYAG | 1 cut(s) | 868 |
| BstUI | CGCG | 1 cut(s) | 2359 |
| BstV1I | GCAGC | 8 cut(s) | 147, 964, 1035, 1804, 2216, 2431, 2835, 2960 |
| BstV2I | GAAGAC | 2 cut(s) | 851, 2328 |
| BstX2I | RGATCY | 3 cut(s) | 1702, 2388, 2738 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2304 |
| BstYI | RGATCY | 3 cut(s) | 1702, 2388, 2738 |
| BsuRI | GGCC | 7 cut(s) | 5, 281, 522, 585, 841, 1185, 2624 |
| BtgI | CCRYGG | 5 cut(s) | 6, 69, 358, 580, 2734 |
| BtrI | CACGTC | 1 cut(s) | 2803 |
| BtsCI | GGATG | 5 cut(s) | 16, 1546, 2387, 2398, 2788 |
| BtsI | GCAGTG | 2 cut(s) | 1384, 1937 |
| BtsIMutI | CAGTG | 9 cut(s) | 341, 729, 834, 1186, 1308, 1384, 1427, 1937, 2034 |
| BveI | ACCTGC | 1 cut(s) | 2401 |
| Cac8I | GCNNGC | 4 cut(s) | 843, 2220, 2234, 2861 |
| CciI | TCATGA | 1 cut(s) | 912 |
| CfoI | GCGC | 2 cut(s) | 606, 2359 |
| Cfr10I | RCCGGY | 2 cut(s) | 1807, 2232 |
| Cfr13I | GGNCC | 4 cut(s) | 279, 521, 839, 2622 |
| Csp6I | GTAC | 6 cut(s) | 568, 676, 1243, 1336, 1459, 2684 |
| CviQI | GTAC | 6 cut(s) | 568, 676, 1243, 1336, 1459, 2684 |
| DraI | TTTAAA | 1 cut(s) | 2667 |
| EaeI | YGGCCR | 3 cut(s) | 3, 583, 1183 |
| Eam1104I | CTCTTC | 8 cut(s) | 9, 258, 821, 1075, 2034, 2196, 2303, 2874 |
| EarI | CTCTTC | 8 cut(s) | 9, 258, 821, 1075, 2034, 2196, 2303, 2874 |
| Ecl136II | GAGCTC | 2 cut(s) | 315, 637 |
| Eco130I | CCWWGG | 8 cut(s) | 6, 69, 275, 580, 1721, 1767, 2448, 2943 |
| Eco24I | GRGCYC | 4 cut(s) | 317, 639, 912, 1278 |
| Eco31I | GGTCTC | 4 cut(s) | 149, 352, 1743, 2825 |
| Eco53kI | GAGCTC | 2 cut(s) | 315, 637 |
| Eco57I | CTGAAG | 5 cut(s) | 239, 1110, 1212, 2058, 2337 |
| Eco91I | GGTNACC | 1 cut(s) | 1222 |
| EcoICRI | GAGCTC | 2 cut(s) | 315, 637 |
| EcoO109I | RGGNCCY | 3 cut(s) | 279, 521, 2622 |
| EcoO65I | GGTNACC | 1 cut(s) | 1222 |
| EcoRI | GAATTC | 1 cut(s) | 1575 |
| EcoRII | CCWGG | 4 cut(s) | 639, 1402, 2159, 2834 |
| EcoT14I | CCWWGG | 8 cut(s) | 6, 69, 275, 580, 1721, 1767, 2448, 2943 |
| EcoT38I | GRGCYC | 4 cut(s) | 317, 639, 912, 1278 |
| ErhI | CCWWGG | 8 cut(s) | 6, 69, 275, 580, 1721, 1767, 2448, 2943 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 376, 408, 800, 832, 1454, 1486 |
| FaqI | GGGAC | 4 cut(s) | 482, 1145, 1584, 1652 |
| FauI | CCCGC | 2 cut(s) | 2227, 2852 |
| FauNDI | CATATG | 1 cut(s) | 730 |
| FbaI | TGATCA | 2 cut(s) | 1746, 1830 |
| Fnu4HI | GCNGC | 8 cut(s) | 136, 978, 1049, 1793, 2205, 2445, 2849, 2949 |
| FokI | GGATG | 5 cut(s) | 23, 1553, 2385, 2394, 2795 |
| FriOI | GRGCYC | 4 cut(s) | 317, 639, 912, 1278 |
| Fsp4HI | GCNGC | 8 cut(s) | 136, 978, 1049, 1793, 2205, 2445, 2849, 2949 |
| GlaI | GCGC | 2 cut(s) | 605, 2358 |
| GluI | GCNGC | 8 cut(s) | 136, 978, 1049, 1793, 2205, 2445, 2849, 2949 |
| GsaI | CCCAGC | 1 cut(s) | 2924 |
| GsuI | CTGGAG | 4 cut(s) | 623, 976, 2623, 2849 |
| HaeIII | GGCC | 7 cut(s) | 5, 281, 522, 585, 841, 1185, 2624 |
| HapII | CCGG | 4 cut(s) | 981, 1636, 1808, 2233 |
| HhaI | GCGC | 2 cut(s) | 606, 2359 |
| Hin6I | GCGC | 2 cut(s) | 604, 2357 |
| HinP1I | GCGC | 2 cut(s) | 604, 2357 |
| HindIII | AAGCTT | 3 cut(s) | 595, 998, 1582 |
| HinfI | GANTC | 7 cut(s) | 191, 461, 711, 1516, 1617, 2188, 2324 |
| HpaII | CCGG | 4 cut(s) | 981, 1636, 1808, 2233 |
| HphI | GGTGA | 2 cut(s) | 189, 2888 |
| Hpy166II | GTNNAC | 3 cut(s) | 365, 568, 2494 |
| Hpy8I | GTNNAC | 3 cut(s) | 365, 568, 2494 |
| HpyCH4III | ACNGT | 5 cut(s) | 369, 405, 1803, 2458, 2914 |
| HpyCH4IV | ACGT | 2 cut(s) | 2790, 2802 |
| HpySE526I | ACGT | 2 cut(s) | 2790, 2802 |
| HspAI | GCGC | 2 cut(s) | 604, 2357 |
| KroI | GCCGGC | 1 cut(s) | 2232 |
| KroNI | GCCGGC | 1 cut(s) | 2234 |
| Ksp22I | TGATCA | 2 cut(s) | 1746, 1830 |
| LguI | GCTCTTC | 3 cut(s) | 258, 2034, 2874 |
| LmnI | GCTCC | 6 cut(s) | 49, 555, 642, 1591, 2279, 2985 |
| Lsp1109I | GCAGC | 8 cut(s) | 147, 964, 1035, 1804, 2216, 2431, 2835, 2960 |
| LweI | GCATC | 6 cut(s) | 35, 1543, 1774, 1807, 2040, 2633 |
| MaeII | ACGT | 2 cut(s) | 2790, 2802 |
| MaeIII | GTNAC | 8 cut(s) | 724, 745, 950, 1222, 1935, 2263, 2803, 2924 |
| MfeI | CAATTG | 2 cut(s) | 186, 876 |
| MflI | RGATCY | 3 cut(s) | 1702, 2388, 2738 |
| MhlI | GDGCHC | 4 cut(s) | 317, 639, 912, 1278 |
| MlsI | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| MluNI | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| MlyI | GAGTC | 5 cut(s) | 455, 720, 1626, 2182, 2318 |
| MmeI | TCCRAC | 3 cut(s) | 1851, 2366, 2729 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| MroNI | GCCGGC | 1 cut(s) | 2232 |
| MroXI | GAANNNNTTC | 2 cut(s) | 815, 1315 |
| MscI | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| MseI | TTAA | 7 cut(s) | 284, 621, 1248, 1391, 2343, 2564, 2666 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2302, 2380, 2931 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 585, 1185 |
| MspA1I | CMGCKG | 2 cut(s) | 1862, 2874 |
| MspI | CCGG | 4 cut(s) | 981, 1636, 1808, 2233 |
| MspR9I | CCNGG | 6 cut(s) | 641, 982, 1404, 1637, 2161, 2836 |
| MunI | CAATTG | 2 cut(s) | 186, 876 |
| Mva1269I | GAATGC | 4 cut(s) | 1154, 1607, 2148, 2519 |
| MvaI | CCWGG | 4 cut(s) | 641, 1404, 2161, 2836 |
| MvnI | CGCG | 1 cut(s) | 2359 |
| NaeI | GCCGGC | 1 cut(s) | 2234 |
| NciI | CCSGG | 2 cut(s) | 982, 1637 |
| NcoI | CCATGG | 3 cut(s) | 6, 69, 580 |
| NdeI | CATATG | 1 cut(s) | 730 |
| NgoMIV | GCCGGC | 1 cut(s) | 2232 |
| NlaIV | GGNNCC | 6 cut(s) | 578, 1401, 2158, 2275, 2390, 2732 |
| NmuCI | GTSAC | 5 cut(s) | 724, 1935, 2263, 2803, 2924 |
| NspI | RCATGY | 1 cut(s) | 1645 |
| NspV | TTCGAA | 1 cut(s) | 1579 |
| PagI | TCATGA | 1 cut(s) | 912 |
| PciSI | GCTCTTC | 3 cut(s) | 258, 2034, 2874 |
| PctI | GAATGC | 4 cut(s) | 1154, 1607, 2148, 2519 |
| PdiI | GCCGGC | 1 cut(s) | 2234 |
| PdmI | GAANNNNTTC | 2 cut(s) | 815, 1315 |
| PfeI | GAWTC | 2 cut(s) | 191, 1516 |
| PflFI | GACNNNGTC | 1 cut(s) | 710 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1409, 2779 |
| PfoI | TCCNGGA | 1 cut(s) | 1635 |
| PkrI | GCNGC | 8 cut(s) | 137, 979, 1050, 1794, 2206, 2446, 2850, 2950 |
| Ple19I | CGATCG | 1 cut(s) | 2574 |
| PleI | GAGTC | 5 cut(s) | 455, 719, 1625, 2182, 2318 |
| PpsI | GAGTC | 5 cut(s) | 455, 719, 1625, 2182, 2318 |
| Ppu21I | YACGTR | 1 cut(s) | 2791 |
| PshBI | ATTAAT | 1 cut(s) | 1248 |
| Psp124BI | GAGCTC | 2 cut(s) | 317, 639 |
| Psp6I | CCWGG | 4 cut(s) | 639, 1402, 2159, 2834 |
| PspEI | GGTNACC | 1 cut(s) | 1222 |
| PspFI | CCCAGC | 1 cut(s) | 2920 |
| PspGI | CCWGG | 4 cut(s) | 639, 1402, 2159, 2834 |
| PspN4I | GGNNCC | 6 cut(s) | 578, 1401, 2158, 2275, 2390, 2732 |
| PspPI | GGNCC | 4 cut(s) | 279, 521, 839, 2622 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 560, 592 |
| PsuI | RGATCY | 3 cut(s) | 1702, 2388, 2738 |
| PsyI | GACNNNGTC | 1 cut(s) | 710 |
| PvuI | CGATCG | 1 cut(s) | 2574 |
| PvuII | CAGCTG | 1 cut(s) | 1862 |
| RsaI | GTAC | 6 cut(s) | 569, 677, 1244, 1337, 1460, 2685 |
| RsaNI | GTAC | 6 cut(s) | 568, 676, 1243, 1336, 1459, 2684 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2302, 2380, 2931 |
| SacI | GAGCTC | 2 cut(s) | 317, 639 |
| SapI | GCTCTTC | 3 cut(s) | 258, 2034, 2874 |
| SaqAI | TTAA | 7 cut(s) | 284, 621, 1248, 1391, 2343, 2564, 2666 |
| SatI | GCNGC | 8 cut(s) | 136, 978, 1049, 1793, 2205, 2445, 2849, 2949 |
| Sau96I | GGNCC | 4 cut(s) | 279, 521, 839, 2622 |
| ScaI | AGTACT | 1 cut(s) | 677 |
| SchI | GAGTC | 5 cut(s) | 455, 720, 1626, 2182, 2318 |
| ScrFI | CCNGG | 6 cut(s) | 641, 982, 1404, 1637, 2161, 2836 |
| SduI | GDGCHC | 4 cut(s) | 317, 639, 912, 1278 |
| SfaNI | GCATC | 6 cut(s) | 35, 1543, 1774, 1807, 2040, 2633 |
| SfcI | CTRYAG | 1 cut(s) | 868 |
| SfuI | TTCGAA | 1 cut(s) | 1579 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2302, 2380, 2931 |
| SmlI | CTYRAG | 6 cut(s) | 452, 632, 1670, 2137, 2687, 2952 |
| SmoI | CTYRAG | 6 cut(s) | 452, 632, 1670, 2137, 2687, 2952 |
| SpeI | ACTAGT | 1 cut(s) | 749 |
| SsiI | CCGC | 4 cut(s) | 2202, 2220, 2859, 2874 |
| SspI | AATATT | 2 cut(s) | 422, 825 |
| SstI | GAGCTC | 2 cut(s) | 317, 639 |
| StyD4I | CCNGG | 6 cut(s) | 639, 980, 1402, 1635, 2159, 2834 |
| StyI | CCWWGG | 8 cut(s) | 6, 69, 275, 580, 1721, 1767, 2448, 2943 |
| TaaI | ACNGT | 5 cut(s) | 369, 405, 1803, 2458, 2914 |
| TaiI | ACGT | 2 cut(s) | 2793, 2805 |
| TaqI | TCGA | 6 cut(s) | 971, 1331, 1346, 1579, 2574, 2868 |
| TatI | WGTACW | 4 cut(s) | 567, 675, 1335, 2683 |
| TfiI | GAWTC | 2 cut(s) | 191, 1516 |
| Tru1I | TTAA | 7 cut(s) | 284, 621, 1248, 1391, 2343, 2564, 2666 |
| Tru9I | TTAA | 7 cut(s) | 284, 621, 1248, 1391, 2343, 2564, 2666 |
| TscAI | CASTG | 9 cut(s) | 348, 729, 841, 1186, 1308, 1384, 1434, 1944, 2041 |
| TseFI | GTSAC | 5 cut(s) | 724, 1935, 2263, 2803, 2924 |
| TseI | GCWGC | 8 cut(s) | 135, 977, 1048, 1792, 2204, 2444, 2848, 2948 |
| Tsp45I | GTSAC | 5 cut(s) | 724, 1935, 2263, 2803, 2924 |
| TspGWI | ACGGA | 2 cut(s) | 2010, 2751 |
| TspRI | CASTG | 9 cut(s) | 348, 729, 841, 1186, 1308, 1384, 1434, 1944, 2041 |
| Tth111I | GACNNNGTC | 1 cut(s) | 710 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1409, 2779 |
| VspI | ATTAAT | 1 cut(s) | 1248 |
| XapI | RAATTY | 8 cut(s) | 1315, 1433, 1528, 1575, 1598, 1777, 1875, 1886 |
| XbaI | TCTAGA | 1 cut(s) | 61 |
| XceI | RCATGY | 1 cut(s) | 1645 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2382 |
| XmnI | GAANNNNTTC | 2 cut(s) | 815, 1315 |
| ZrmI | AGTACT | 1 cut(s) | 677 |