Prupe.6G199900_v2.0.a1

disease resistance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
20699562 .. 20702009
2448 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G199900.1

Sequence Viewer

Length: 798 bp
ATGACACCGAAATCTCCACAATCGAAACCTAATCCTGTAGCCGAAGATTATGTGACAACACTATGCATTACCAAACTGTCCAATTTTAATGATTTGCCATACCGATTGAAGCAATGCTTTCTATATTGTTCCCTTTTCCCTGAAGATCATGTGATCATAAATATAAGGCTCATTAGATTGTGGATCGCTGAAGGATTTGTTGAACATGTCGAAGGGCTCACGCCAGAAGAAGTTGCAAATAGCTATCTTACGGAACTCATTTTTCGTAACATGCTACAGGAAAGGTTTCTAGGATCCATCCCAGCATCAAAAAAAGAAAAGTTTTGTGCTATACATGATGGGAGTGAAACTGGGGCACTCTGTTTGTCAATTCAAACAACTAAGGGGGAAATTGGATCATGCACAGGTATATCACGGCTCCGTTCGTTTCTTGTCTTTGCCACTGGAGTATCCTCATTCTCTTTCTCAAATAAATTACCTTTTGACCTTAAATTGTTGAAGGTTCTAGATTTGGAGTATGTCCCCACAACTACAAAAAAGCAAAAAGACGACGAAGACGACGTTATTGATACCTACTACGTCGCATATATAAAAACAACCGTCGTAAAATTAATTTTCCACTTCGATTTTTCGATAAAAGATGACGTGGAAATAGTTGTCAGTGTCATTATTTACGACGTATATGTTAATAGAGTAGACGTTGAAAAACTAAACAACGTCGGTTACAAATATATGAGAGTCGTATTACAAAATTTATACGTCCTATTTTCAGAAACAAACAACGACGATAAATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

266

Amino Acids

30.37

Weight (kDa)

5.35

Isoelectric Point (pI)

35.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0022443)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 696
AclWI GGATC 4 cut(s) 191, 288, 301, 403
AcsI RAATTY 1 cut(s) 751
AcuI CTGAAG 2 cut(s) 162, 210
AflIII ACRYGT 1 cut(s) 205
AgsI TTSAA 5 cut(s) 109, 203, 374, 499, 704
AjiI CACGTC 1 cut(s) 646
AluBI AGCT 1 cut(s) 243
AluI AGCT 1 cut(s) 243
AlwI GGATC 4 cut(s) 191, 288, 301, 403
ApoI RAATTY 1 cut(s) 751
AseI ATTAAT 1 cut(s) 611
Asp700I GAANNNNTTC 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 358
BaeI ACNNNNGTAYC 2 cut(s) 432, 465
BamHI GGATCC 1 cut(s) 293
BanII GRGCYC 1 cut(s) 219
BbsI GAAGAC 1 cut(s) 561
BccI CCATC 2 cut(s) 305, 332
BceAI ACGGC 1 cut(s) 431
BciVI GTATCC 1 cut(s) 460
BclI TGATCA 1 cut(s) 153
BfaI CTAG 2 cut(s) 290, 506
BfmI CTRYAG 2 cut(s) 36, 275
BfuI GTATCC 1 cut(s) 460
BmgBI CACGTC 1 cut(s) 646
BmiI GGNNCC 2 cut(s) 295, 419
BmrI ACTGGG 1 cut(s) 360
BmsI GCATC 1 cut(s) 314
BmuI ACTGGG 1 cut(s) 360
BpiI GAAGAC 1 cut(s) 561
BpmI CTGGAG 1 cut(s) 465
Bse1I ACTGG 2 cut(s) 355, 448
Bse3DI GCAATG 1 cut(s) 119
BseGI GGATG 1 cut(s) 297
BseMI GCAATG 1 cut(s) 119
BseNI ACTGG 2 cut(s) 355, 448
BseSI GKGCMC 1 cut(s) 358
BseYI CCCAGC 1 cut(s) 301
BslFI GGGAC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 506
Bsp1286I GDGCHC 2 cut(s) 219, 358
Bsp143I GATC 5 cut(s) 145, 153, 183, 293, 395
BspLI GGNNCC 2 cut(s) 295, 419
BspPI GGATC 4 cut(s) 191, 288, 301, 403
BsrDI GCAATG 1 cut(s) 119
BsrI ACTGG 2 cut(s) 355, 448
BssMI GATC 5 cut(s) 145, 153, 183, 293, 395
Bst4CI ACNGT 2 cut(s) 78, 601
BstDEI CTNAG 1 cut(s) 381
BstF5I GGATG 1 cut(s) 297
BstKTI GATC 5 cut(s) 148, 156, 186, 296, 398
BstMBI GATC 5 cut(s) 145, 153, 183, 293, 395
BstNSI RCATGY 2 cut(s) 209, 274
BstSFI CTRYAG 2 cut(s) 36, 275
BstSLI GKGCMC 1 cut(s) 358
BstV2I GAAGAC 1 cut(s) 561
BstX2I RGATCY 1 cut(s) 293
BstYI RGATCY 1 cut(s) 293
BsuI GTATCC 1 cut(s) 460
BtrI CACGTC 1 cut(s) 646
BtsCI GGATG 1 cut(s) 297
BtsIMutI CAGTG 2 cut(s) 441, 667
CviAII CATG 5 cut(s) 149, 206, 271, 335, 399
CviJI RGCY 5 cut(s) 41, 169, 217, 243, 418
CviKI_1 RGCY 5 cut(s) 41, 169, 217, 243, 418
DdeI CTNAG 1 cut(s) 381
DpnI GATC 5 cut(s) 147, 155, 185, 295, 397
DpnII GATC 5 cut(s) 145, 153, 183, 293, 395
Eco24I GRGCYC 1 cut(s) 219
Eco57I CTGAAG 2 cut(s) 162, 210
EcoT22I ATGCAT 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 219
FaeI CATG 5 cut(s) 152, 209, 274, 338, 402
FalI AAGNNNNNCTT 2 cut(s) 101, 133
FaqI GGGAC 1 cut(s) 506
FatI CATG 5 cut(s) 148, 205, 270, 334, 398
FbaI TGATCA 1 cut(s) 153
FblI GTMKAC 1 cut(s) 696
FokI GGATG 1 cut(s) 284
FriOI GRGCYC 1 cut(s) 219
FspBI CTAG 2 cut(s) 290, 506
GsaI CCCAGC 1 cut(s) 305
GsuI CTGGAG 1 cut(s) 465
Hin1II CATG 5 cut(s) 152, 209, 274, 338, 402
HinfI GANTC 1 cut(s) 738
Hpy166II GTNNAC 1 cut(s) 697
Hpy188I TCNGA 1 cut(s) 772
Hpy188III TCNNGA 1 cut(s) 506
Hpy8I GTNNAC 1 cut(s) 697
Hpy99I CGWCG 7 cut(s) 554, 563, 584, 605, 680, 722, 788
HpyAV CCTTC 3 cut(s) 185, 206, 493
HpyCH4III ACNGT 2 cut(s) 78, 601
HpyCH4IV ACGT 7 cut(s) 561, 579, 645, 678, 699, 717, 759
HpyCH4V TGCA 3 cut(s) 66, 236, 402
HpyF3I CTNAG 1 cut(s) 381
HpySE526I ACGT 7 cut(s) 561, 579, 645, 678, 699, 717, 759
Hsp92II CATG 5 cut(s) 152, 209, 274, 338, 402
Ksp22I TGATCA 1 cut(s) 153
Kzo9I GATC 5 cut(s) 145, 153, 183, 293, 395
LmnI GCTCC 1 cut(s) 423
LpnPI CCDG 8 cut(s) 48, 153, 237, 263, 315, 336, 390, 429
LweI GCATC 1 cut(s) 314
MaeI CTAG 2 cut(s) 290, 506
MaeII ACGT 7 cut(s) 561, 579, 645, 678, 699, 717, 759
MaeIII GTNAC 3 cut(s) 52, 266, 722
MalI GATC 5 cut(s) 147, 155, 185, 295, 397
MboI GATC 5 cut(s) 145, 153, 183, 293, 395
MboII GAAGA 4 cut(s) 56, 155, 239, 566
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 2 cut(s) 219, 358
MluCI AATT 8 cut(s) 82, 369, 390, 473, 491, 608, 612, 751
MlyI GAGTC 1 cut(s) 747
MnlI CCTC 1 cut(s) 463
Mph1103I ATGCAT 1 cut(s) 68
MroXI GAANNNNTTC 1 cut(s) 285
MseI TTAA 4 cut(s) 87, 489, 611, 687
NdeII GATC 5 cut(s) 145, 153, 183, 293, 395
NlaIII CATG 5 cut(s) 152, 209, 274, 338, 402
NlaIV GGNNCC 2 cut(s) 295, 419
NmuCI GTSAC 1 cut(s) 52
NsiI ATGCAT 1 cut(s) 68
NspI RCATGY 2 cut(s) 209, 274
PciI ACATGT 1 cut(s) 205
PcsI WCGNNNNNNNCGW 2 cut(s) 555, 558
PdmI GAANNNNTTC 1 cut(s) 285
PleI GAGTC 1 cut(s) 746
PpsI GAGTC 1 cut(s) 746
PscI ACATGT 1 cut(s) 205
PshBI ATTAAT 1 cut(s) 611
PspFI CCCAGC 1 cut(s) 301
PspN4I GGNNCC 2 cut(s) 295, 419
PsuI RGATCY 1 cut(s) 293
SaqAI TTAA 4 cut(s) 87, 489, 611, 687
Sau3AI GATC 5 cut(s) 145, 153, 183, 293, 395
SchI GAGTC 1 cut(s) 747
SduI GDGCHC 2 cut(s) 219, 358
SfaNI GCATC 1 cut(s) 314
SfcI CTRYAG 2 cut(s) 36, 275
Sse9I AATT 8 cut(s) 82, 369, 390, 473, 491, 608, 612, 751
SspI AATATT 1 cut(s) 794
SspMI CTAG 2 cut(s) 290, 506
TaaI ACNGT 2 cut(s) 78, 601
TaiI ACGT 7 cut(s) 564, 582, 648, 681, 702, 720, 762
TaqI TCGA 4 cut(s) 23, 210, 624, 632
TasI AATT 8 cut(s) 82, 369, 390, 473, 491, 608, 612, 751
Tru1I TTAA 4 cut(s) 87, 489, 611, 687
Tru9I TTAA 4 cut(s) 87, 489, 611, 687
TscAI CASTG 2 cut(s) 448, 667
TseFI GTSAC 1 cut(s) 52
Tsp45I GTSAC 1 cut(s) 52
TspGWI ACGGA 2 cut(s) 266, 410
TspRI CASTG 2 cut(s) 448, 667
VspI ATTAAT 1 cut(s) 611
XapI RAATTY 1 cut(s) 751
XbaI TCTAGA 1 cut(s) 505
XceI RCATGY 2 cut(s) 209, 274
XmiI GTMKAC 1 cut(s) 696
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 2 cut(s) 290, 506
Zsp2I ATGCAT 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.