transcription initiation from RNA polymerase III promoter
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06790 AT1G06790 |
| fragaria_vesca | FvH4_1g22880 |
| malus_domestica | MD08G1227600.v1.1 |
| prunus_persica | Prupe.2G103200_v2.0.a1 Prupe.2G103200_v2.0.a1 Prupe.2G103200_v2.0.a1 Prupe.2G103200_v2.0.a1 Prupe.2G103200_v2.0.a1 Prupe.7G016800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0063451 |
| rosa_laevigata | RLG00000022776 RLG00000035635 |
| rosa_multiflora | Rmu_sc0016394.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00017270 |
| rosa_rugosa | Rorug05G0357400 |
| rosa_samantha | Rh5AG416500 Rh5BG431600 Rh5CG454900 Rh5DG445100 |
| rosa_wichuraiana | Rw5G039120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 198 |
| AcsI | RAATTY | 2 cut(s) | 50, 200 |
| AdeI | CACNNNGTG | 1 cut(s) | 217 |
| AfaI | GTAC | 1 cut(s) | 72 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 17, 277 |
| AgsI | TTSAA | 2 cut(s) | 50, 302 |
| AjiI | CACGTC | 1 cut(s) | 144 |
| AluBI | AGCT | 1 cut(s) | 209 |
| AluI | AGCT | 1 cut(s) | 209 |
| AlwI | GGATC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 2 cut(s) | 32, 244 |
| ApoI | RAATTY | 2 cut(s) | 50, 200 |
| BbsI | GAAGAC | 1 cut(s) | 258 |
| BbvI | GCAGC | 2 cut(s) | 19, 256 |
| BccI | CCATC | 3 cut(s) | 103, 176, 181 |
| BfaI | CTAG | 1 cut(s) | 328 |
| BisI | GCNGC | 2 cut(s) | 33, 245 |
| BlsI | GCNGC | 2 cut(s) | 34, 246 |
| BmgBI | CACGTC | 1 cut(s) | 144 |
| BmsI | GCATC | 1 cut(s) | 154 |
| BpiI | GAAGAC | 1 cut(s) | 258 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 17, 277 |
| BseGI | GGATG | 2 cut(s) | 95, 192 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 17, 277 |
| BseXI | GCAGC | 2 cut(s) | 19, 256 |
| BslFI | GGGAC | 2 cut(s) | 28, 140 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 17, 277 |
| BsmFI | GGGAC | 2 cut(s) | 28, 140 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 198 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst4CI | ACNGT | 2 cut(s) | 215, 277 |
| BstDEI | CTNAG | 1 cut(s) | 287 |
| BstF5I | GGATG | 2 cut(s) | 95, 192 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstV1I | GCAGC | 2 cut(s) | 19, 256 |
| BstV2I | GAAGAC | 1 cut(s) | 258 |
| BtrI | CACGTC | 1 cut(s) | 144 |
| BtsCI | GGATG | 2 cut(s) | 95, 192 |
| BtsIMutI | CAGTG | 1 cut(s) | 220 |
| Csp6I | GTAC | 1 cut(s) | 71 |
| CviAII | CATG | 2 cut(s) | 136, 294 |
| CviJI | RGCY | 3 cut(s) | 109, 209, 247 |
| CviKI_1 | RGCY | 3 cut(s) | 109, 209, 247 |
| CviQI | GTAC | 1 cut(s) | 71 |
| DdeI | CTNAG | 1 cut(s) | 287 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| DraIII | CACNNNGTG | 1 cut(s) | 217 |
| FaeI | CATG | 2 cut(s) | 139, 297 |
| FaiI | YATR | 5 cut(s) | 69, 137, 295, 312, 314 |
| FaqI | GGGAC | 2 cut(s) | 28, 140 |
| FatI | CATG | 2 cut(s) | 135, 293 |
| FauNDI | CATATG | 1 cut(s) | 312 |
| Fnu4HI | GCNGC | 2 cut(s) | 33, 245 |
| FokI | GGATG | 2 cut(s) | 82, 199 |
| Fsp4HI | GCNGC | 2 cut(s) | 33, 245 |
| FspBI | CTAG | 1 cut(s) | 328 |
| GluI | GCNGC | 2 cut(s) | 33, 245 |
| Hin1II | CATG | 2 cut(s) | 139, 297 |
| HinfI | GANTC | 4 cut(s) | 132, 158, 232, 254 |
| Hpy166II | GTNNAC | 2 cut(s) | 141, 220 |
| Hpy188I | TCNGA | 4 cut(s) | 106, 163, 195, 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| Hpy8I | GTNNAC | 2 cut(s) | 141, 220 |
| HpyCH4III | ACNGT | 2 cut(s) | 215, 277 |
| HpyCH4IV | ACGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 167, 324 |
| HpyF3I | CTNAG | 1 cut(s) | 287 |
| HpySE526I | ACGT | 1 cut(s) | 143 |
| Hsp92II | CATG | 2 cut(s) | 139, 297 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 3 cut(s) | 123, 168, 261 |
| Lsp1109I | GCAGC | 2 cut(s) | 19, 256 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 328 |
| MaeII | ACGT | 1 cut(s) | 143 |
| MaeIII | GTNAC | 1 cut(s) | 280 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 1 cut(s) | 263 |
| MluCI | AATT | 3 cut(s) | 50, 200, 237 |
| MlyI | GAGTC | 2 cut(s) | 141, 248 |
| MnlI | CCTC | 1 cut(s) | 117 |
| NdeI | CATATG | 1 cut(s) | 312 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 2 cut(s) | 139, 297 |
| PfeI | GAWTC | 2 cut(s) | 158, 232 |
| PflFI | GACNNNGTC | 1 cut(s) | 131 |
| PkrI | GCNGC | 2 cut(s) | 34, 246 |
| PleI | GAGTC | 2 cut(s) | 140, 248 |
| PpsI | GAGTC | 2 cut(s) | 140, 248 |
| PsyI | GACNNNGTC | 1 cut(s) | 131 |
| RsaI | GTAC | 1 cut(s) | 72 |
| RsaNI | GTAC | 1 cut(s) | 71 |
| SatI | GCNGC | 2 cut(s) | 33, 245 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| SchI | GAGTC | 2 cut(s) | 141, 248 |
| SetI | ASST | 4 cut(s) | 76, 146, 211, 307 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| Sse9I | AATT | 3 cut(s) | 50, 200, 237 |
| SspMI | CTAG | 1 cut(s) | 328 |
| TaaI | ACNGT | 2 cut(s) | 215, 277 |
| TaiI | ACGT | 1 cut(s) | 146 |
| TasI | AATT | 3 cut(s) | 50, 200, 237 |
| TfiI | GAWTC | 2 cut(s) | 158, 232 |
| TscAI | CASTG | 1 cut(s) | 220 |
| TseI | GCWGC | 2 cut(s) | 32, 244 |
| TspDTI | ATGAA | 2 cut(s) | 68, 282 |
| TspRI | CASTG | 1 cut(s) | 220 |
| Tth111I | GACNNNGTC | 1 cut(s) | 131 |
| XapI | RAATTY | 2 cut(s) | 50, 200 |
| XspI | CTAG | 1 cut(s) | 328 |