Prupe.7G038100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
7064875 .. 7065063
189 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G038100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 189 bp
ATGATTCTCTGCTCTAGACTAAGAGTTAGAACCCCAGGAACTCTGGCCAGATCTGCAGGCTGCCACCCCATCTTGTTTACAAGAAAATCCATTTTACTTACAATATTCTTTTCTGACAAATACATACAAGTGGGTTTCTTCCTAAAAGCCAACAAGATCTCATCTTCAGTCCAGCCCCACCTCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

6.99

Weight (kDa)

11.01

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021130)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 45
AcuI CTGAAG 1 cut(s) 150
AjnI CCWGG 1 cut(s) 34
AoxI GGCC 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 60
BalI TGGCCA 1 cut(s) 47
BbvI GCAGC 1 cut(s) 47
BccI CCATC 1 cut(s) 77
BciT130I CCWGG 1 cut(s) 36
BfaI CTAG 1 cut(s) 15
BfmI CTRYAG 1 cut(s) 54
BglII AGATCT 2 cut(s) 50, 156
BisI GCNGC 1 cut(s) 61
BlsI GCNGC 1 cut(s) 62
Bme1390I CCNGG 1 cut(s) 36
BmrFI CCNGG 1 cut(s) 36
BsaJI CCNNGG 1 cut(s) 34
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 34
BseXI GCAGC 1 cut(s) 47
BshFI GGCC 1 cut(s) 47
BsnI GGCC 1 cut(s) 47
Bsp143I GATC 2 cut(s) 50, 156
BspANI GGCC 1 cut(s) 47
BspMAI CTGCAG 1 cut(s) 58
BssECI CCNNGG 1 cut(s) 34
BssMI GATC 2 cut(s) 50, 156
Bst2UI CCWGG 1 cut(s) 36
BstC8I GCNNGC 1 cut(s) 58
BstDEI CTNAG 1 cut(s) 20
BstKTI GATC 2 cut(s) 53, 159
BstMBI GATC 2 cut(s) 50, 156
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 1 cut(s) 34
BstSFI CTRYAG 1 cut(s) 54
BstV1I GCAGC 1 cut(s) 47
BstX2I RGATCY 2 cut(s) 50, 156
BstYI RGATCY 2 cut(s) 50, 156
BsuRI GGCC 1 cut(s) 47
Cac8I GCNNGC 1 cut(s) 58
CviJI RGCY 4 cut(s) 47, 60, 149, 175
CviKI_1 RGCY 4 cut(s) 47, 60, 149, 175
DdeI CTNAG 1 cut(s) 20
DpnI GATC 2 cut(s) 52, 158
DpnII GATC 2 cut(s) 50, 156
EaeI YGGCCR 1 cut(s) 45
Eco57I CTGAAG 1 cut(s) 150
EcoRII CCWGG 1 cut(s) 34
FaiI YATR 1 cut(s) 125
Fnu4HI GCNGC 1 cut(s) 61
Fsp4HI GCNGC 1 cut(s) 61
FspBI CTAG 1 cut(s) 15
GluI GCNGC 1 cut(s) 61
HaeIII GGCC 1 cut(s) 47
HinfI GANTC 1 cut(s) 4
Hpy166II GTNNAC 1 cut(s) 78
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 1 cut(s) 15
Hpy8I GTNNAC 1 cut(s) 78
HpyCH4V TGCA 1 cut(s) 56
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 1 cut(s) 20
Kzo9I GATC 2 cut(s) 50, 156
LpnPI CCDG 6 cut(s) 21, 29, 42, 48, 61, 185
Lsp1109I GCAGC 1 cut(s) 47
MaeI CTAG 1 cut(s) 15
MalI GATC 2 cut(s) 52, 158
MboI GATC 2 cut(s) 50, 156
MboII GAAGA 2 cut(s) 130, 156
MflI RGATCY 2 cut(s) 50, 156
MlsI TGGCCA 1 cut(s) 47
MluNI TGGCCA 1 cut(s) 47
Mox20I TGGCCA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 47
MslI CAYNNNNRTG 1 cut(s) 128
Msp20I TGGCCA 1 cut(s) 47
MspR9I CCNGG 1 cut(s) 36
MvaI CCWGG 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 53
NdeII GATC 2 cut(s) 50, 156
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 1 cut(s) 62
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PstI CTGCAG 1 cut(s) 58
PsuI RGATCY 2 cut(s) 50, 156
RseI CAYNNNNRTG 1 cut(s) 128
SatI GCNGC 1 cut(s) 61
Sau3AI GATC 2 cut(s) 50, 156
ScrFI CCNGG 1 cut(s) 36
SetI ASST 1 cut(s) 183
SfcI CTRYAG 1 cut(s) 54
SmiMI CAYNNNNRTG 1 cut(s) 128
SspI AATATT 1 cut(s) 105
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 1 cut(s) 34
TfiI GAWTC 1 cut(s) 4
TseI GCWGC 1 cut(s) 60
XbaI TCTAGA 1 cut(s) 14
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.