Prupe.7G159700_v2.0.a1

respiratory chain complex III assembly

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16652910 .. 16654771
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G159700.1

Sequence Viewer

Length: 1269 bp
ATGATTTTCATCGTGGAACAACTCATGCTCTTCATTTCTACTGCCCTCGGTTACCTTTCTACACTTTTATCCCCTCATCCTCGCCAATGCCATGACCTTACTCTCATCATCCACCAGACCAACGCCCCACCCAACCAAGTCTACGAAGCGGCCCAACTCTACCTCCCCACCATTGACTTGATCAATCCCTCCACCAGAACCATCCAAGTCAGCAAAACGCCTCGCCAAGAAACCGTCAAGCTTGCCATCGACAGCGGTGAGCAGATCGTCGACACCTTTGAGGACATTAACCTCAAATGGCTCTACGTGGTCCAAACATTCCCGACCGGCCAGGTAACACGTCGCTTCGAGCTAACCTTCCACAAGAAACACAAAGACAAAGTCCTGACCTCCTACTTGCGCCATGTGGTCACTCGGGCTGAAGCCATTAAAAAAGAGGAAAAGATTCTCAAACTTCGTAGCGTTAACTCACCATCACGAGTGGATCTGGAGCACCCAGCCACGTTCGAGACGATCGCCATGGAGCCCGACCAGAAGACAAAGATTATCAAGGACTTGGACAGATTTGTGAGAAGGAGGGAGTTTTATAAGAAGGTGGGGAAGGCCTGGAAAAGAGGCTACTTGTTGTATGGCCCTCCTGGCACTGGCAAGTCGAGCTTGATTGCAGCCATGGCTAATCATCTCAAGTTTGACGTGTATGAATTGGAGCTCGACGGTATTTGCAGTGACTCTCAGTTGAAGAGAGTGTTGCTATCCACTAAAAATCGTTCTATTTTGGTGATTGAGGATATTGATTGCACCGTCCGTGACATGCAAGACCGGAAATCGGAGCAGCCCACGTTCACACTCTCAGGCCTGCTAAACTTCATGGATGGTCTGTGGTCAAGCTGCGGTGACGAGAGAATTATTGTGTTCACAACAAATCACAAGGATCGGCTTGAGCCTGCACTGTTGCGTCCTGGTCGAATGGACGTCCACATTCACATGTCGTATTGCACTCCACATGCGTTTAGGGTCTTGGCCTCCAACTACCTTGGCATTCAAGACTTGAATCATCATGGCCTTTACGGAGAAATCACAGGCTTGCTAGAGAGCACAGAGGTCACCCCTGCTGAGGTCTGTGAGCAACTGTTGAAGAGAGATGATGATGTTGACGACGATGATGCTGATGCTGCTCTTGCTGGACTTGTCAACTTTCTCAAACTCAAGAAGCTTGAAGAGACTAATAATATTGATAAACCAGAAACTCAAGAAGGATCTCAATGTTAA

Protein Analysis

423

Amino Acids

48.14

Weight (kDa)

6.18

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0022492)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 588
AatII GACGTC 1 cut(s) 975
AccI GTMKAC 2 cut(s) 141, 270
AciI CCGC 3 cut(s) 149, 255, 891
AclWI GGATC 3 cut(s) 492, 939, 1264
AcoI YGGCCR 1 cut(s) 328
AcuI CTGAAG 1 cut(s) 441
AcyI GRCGYC 1 cut(s) 972
AfiI CCNNNNNNNGG 3 cut(s) 644, 826, 1114
AflIII ACRYGT 3 cut(s) 338, 693, 984
AgsI TTSAA 5 cut(s) 739, 1043, 1051, 1135, 1217
AjiI CACGTC 2 cut(s) 341, 694
AjnI CCWGG 4 cut(s) 330, 605, 637, 958
AluBI AGCT 6 cut(s) 241, 352, 657, 709, 888, 1213
AluI AGCT 6 cut(s) 241, 352, 657, 709, 888, 1213
Alw21I GWGCWC 3 cut(s) 495, 711, 1097
Alw26I GTCTC 2 cut(s) 503, 1214
AlwI GGATC 3 cut(s) 492, 939, 1264
Ama87I CYCGRG 1 cut(s) 414
AoxI GGCC 7 cut(s) 150, 328, 603, 631, 853, 1020, 1060
ApeKI GCWGC 4 cut(s) 665, 832, 888, 1172
ArsI GACNNNNNNTTYG 2 cut(s) 366, 398
Asp700I GAANNNNTTC 1 cut(s) 444
AspLEI GCGC 1 cut(s) 402
AspS9I GGNCC 3 cut(s) 151, 310, 632
AsuHPI GGTGA 5 cut(s) 269, 462, 790, 905, 1096
AvaI CYCGRG 1 cut(s) 414
AvaII GGWCC 1 cut(s) 310
BanII GRGCYC 2 cut(s) 528, 711
BauI CACGAG 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 3 cut(s) 495, 711, 1097
BbvCI CCTCAGC 1 cut(s) 1113
BbvI GCAGC 4 cut(s) 677, 844, 875, 1159
BccI CCATC 4 cut(s) 209, 254, 481, 866
BcgI CGANNNNNNTGC 2 cut(s) 1145, 1179
BciT130I CCWGG 4 cut(s) 332, 607, 639, 960
BclI TGATCA 1 cut(s) 180
BcoDI GTCTC 2 cut(s) 503, 1214
BfaI CTAG 1 cut(s) 1088
BglI GCCNNNNNGGC 1 cut(s) 639
BisI GCNGC 5 cut(s) 150, 666, 833, 889, 1173
BlsI GCNGC 5 cut(s) 151, 667, 834, 890, 1174
Bme1390I CCNGG 4 cut(s) 332, 607, 639, 960
Bme18I GGWCC 1 cut(s) 310
BmeT110I CYCGRG 1 cut(s) 414
BmgBI CACGTC 2 cut(s) 341, 694
BmgT120I GGNCC 3 cut(s) 151, 310, 632
BmiI GGNNCC 1 cut(s) 525
BmrFI CCNGG 4 cut(s) 332, 607, 639, 960
BmsI GCATC 2 cut(s) 1153, 1159
BpiI GAAGAC 1 cut(s) 542
BpmI CTGGAG 1 cut(s) 509
Bpu10I CCTNAGC 1 cut(s) 1113
BpuEI CTTGAG 4 cut(s) 668, 959, 1190, 1233
BsaAI YACGTR 1 cut(s) 307
BsaBI GATNNNNATC 1 cut(s) 8
BsaHI GRCGYC 1 cut(s) 972
BsaJI CCNNGG 4 cut(s) 46, 519, 669, 1033
BsaWI WCCGGW 1 cut(s) 819
BsaXI ACNNNNNCTCC 2 cut(s) 147, 177
Bsc4I CCNNNNNNNGG 3 cut(s) 644, 826, 1114
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 649
Bse8I GATNNNNATC 1 cut(s) 8
BseBI CCWGG 4 cut(s) 332, 607, 639, 960
BseDI CCNNGG 4 cut(s) 46, 519, 669, 1033
BseGI GGATG 4 cut(s) 76, 108, 201, 877
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 3 cut(s) 644, 826, 1114
BseMII CTCAG 3 cut(s) 746, 864, 1104
BseNI ACTGG 1 cut(s) 649
BseXI GCAGC 4 cut(s) 677, 844, 875, 1159
BseYI CCCAGC 1 cut(s) 496
BsgI GTGCAG 1 cut(s) 930
Bsh1285I CGRYCG 2 cut(s) 327, 516
BshFI GGCC 7 cut(s) 152, 330, 605, 633, 855, 1022, 1062
BsiEI CGRYCG 2 cut(s) 327, 516
BsiHKAI GWGCWC 3 cut(s) 495, 711, 1097
BsiHKCI CYCGRG 1 cut(s) 414
BsiSI CCGG 2 cut(s) 327, 820
BslI CCNNNNNNNGG 3 cut(s) 644, 826, 1114
BsmAI GTCTC 2 cut(s) 503, 1214
BsmBI CGTCTC 1 cut(s) 503
BsmI GAATGC 1 cut(s) 1038
BsnI GGCC 7 cut(s) 152, 330, 605, 633, 855, 1022, 1062
BsoBI CYCGRG 1 cut(s) 414
Bsp1286I GDGCHC 4 cut(s) 495, 528, 711, 1097
Bsp143I GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
Bsp19I CCATGG 2 cut(s) 519, 669
BspACI CCGC 3 cut(s) 149, 255, 891
BspANI GGCC 7 cut(s) 152, 330, 605, 633, 855, 1022, 1062
BspCNI CTCAG 3 cut(s) 745, 863, 1105
BspLI GGNNCC 1 cut(s) 525
BspPI GGATC 3 cut(s) 492, 939, 1264
BspQI GCTCTTC 1 cut(s) 35
BsrFI RCCGGY 1 cut(s) 326
BsrI ACTGG 1 cut(s) 649
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 4 cut(s) 46, 519, 669, 1033
BssMI GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
BssNI GRCGYC 1 cut(s) 972
BssSI CACGAG 1 cut(s) 477
BssT1I CCWWGG 3 cut(s) 519, 669, 1033
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 4 cut(s) 332, 607, 639, 960
Bst4CI ACNGT 5 cut(s) 235, 716, 802, 951, 1131
Bst6I CTCTTC 4 cut(s) 35, 734, 1130, 1212
BstACI GRCGYC 1 cut(s) 972
BstBAI YACGTR 1 cut(s) 307
BstC8I GCNNGC 4 cut(s) 243, 857, 945, 1085
BstDEI CTNAG 3 cut(s) 732, 850, 1113
BstDSI CCRYGG 2 cut(s) 519, 669
BstEII GGTNACC 2 cut(s) 50, 1102
BstF5I GGATG 4 cut(s) 76, 108, 201, 877
BstHHI GCGC 1 cut(s) 402
BstKTI GATC 6 cut(s) 183, 267, 487, 516, 934, 1259
BstMAI GTCTC 2 cut(s) 503, 1214
BstMBI GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
BstMCI CGRYCG 2 cut(s) 327, 516
BstMWI GCNNNNNNNGC 5 cut(s) 639, 654, 671, 1172, 1178
BstNI CCWGG 4 cut(s) 332, 607, 639, 960
BstNSI RCATGY 3 cut(s) 814, 988, 1007
BstPI GGTNACC 2 cut(s) 50, 1102
BstSCI CCNGG 4 cut(s) 330, 605, 637, 958
BstV1I GCAGC 4 cut(s) 677, 844, 875, 1159
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 2 cut(s) 484, 1256
BstYI RGATCY 2 cut(s) 484, 1256
BsuRI GGCC 7 cut(s) 152, 330, 605, 633, 855, 1022, 1062
BtgI CCRYGG 2 cut(s) 519, 669
BtrI CACGTC 2 cut(s) 341, 694
BtsCI GGATG 4 cut(s) 76, 108, 201, 877
BtsI GCAGTG 1 cut(s) 730
BtsIMutI CAGTG 3 cut(s) 642, 730, 947
Cac8I GCNNGC 4 cut(s) 243, 857, 945, 1085
CfoI GCGC 1 cut(s) 402
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 3 cut(s) 151, 310, 632
CseI GACGC 1 cut(s) 944
DdeI CTNAG 3 cut(s) 732, 850, 1113
DpnI GATC 6 cut(s) 182, 266, 486, 515, 933, 1258
DpnII GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
EaeI YGGCCR 1 cut(s) 328
Eam1104I CTCTTC 4 cut(s) 35, 734, 1130, 1212
EarI CTCTTC 4 cut(s) 35, 734, 1130, 1212
Ecl136II GAGCTC 1 cut(s) 709
Eco130I CCWWGG 3 cut(s) 519, 669, 1033
Eco147I AGGCCT 2 cut(s) 605, 855
Eco24I GRGCYC 2 cut(s) 528, 711
Eco47I GGWCC 1 cut(s) 310
Eco53kI GAGCTC 1 cut(s) 709
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 414
Eco91I GGTNACC 2 cut(s) 50, 1102
EcoICRI GAGCTC 1 cut(s) 709
EcoO65I GGTNACC 2 cut(s) 50, 1102
EcoRII CCWGG 4 cut(s) 330, 605, 637, 958
EcoT14I CCWWGG 3 cut(s) 519, 669, 1033
EcoT38I GRGCYC 2 cut(s) 528, 711
ErhI CCWWGG 3 cut(s) 519, 669, 1033
Esp3I CGTCTC 1 cut(s) 503
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FbaI TGATCA 1 cut(s) 180
FblI GTMKAC 2 cut(s) 141, 270
Fnu4HI GCNGC 5 cut(s) 150, 666, 833, 889, 1173
FokI GGATG 4 cut(s) 63, 95, 188, 884
FriOI GRGCYC 2 cut(s) 528, 711
Fsp4HI GCNGC 5 cut(s) 150, 666, 833, 889, 1173
FspBI CTAG 1 cut(s) 1088
GlaI GCGC 1 cut(s) 401
GluI GCNGC 5 cut(s) 150, 666, 833, 889, 1173
GsaI CCCAGC 1 cut(s) 500
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 7 cut(s) 152, 330, 605, 633, 855, 1022, 1062
HapII CCGG 2 cut(s) 327, 820
HgaI GACGC 1 cut(s) 944
HhaI GCGC 1 cut(s) 402
Hin1I GRCGYC 1 cut(s) 972
Hin6I GCGC 1 cut(s) 400
HinP1I GCGC 1 cut(s) 400
HincII GTYRAC 4 cut(s) 271, 466, 1153, 1192
HindII GTYRAC 4 cut(s) 271, 466, 1153, 1192
HindIII AAGCTT 2 cut(s) 239, 1211
HinfI GANTC 3 cut(s) 445, 728, 1051
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 2 cut(s) 327, 820
HphI GGTGA 5 cut(s) 269, 462, 790, 905, 1096
Hpy166II GTNNAC 8 cut(s) 142, 271, 466, 843, 915, 976, 1153, 1192
Hpy188I TCNGA 1 cut(s) 829
Hpy188III TCNNGA 8 cut(s) 322, 385, 477, 488, 508, 1043, 1207, 1250
Hpy8I GTNNAC 8 cut(s) 142, 271, 466, 843, 915, 976, 1153, 1192
Hpy99I CGWCG 4 cut(s) 272, 345, 716, 1160
HpyAV CCTTC 5 cut(s) 367, 567, 586, 595, 1247
HpyCH4III ACNGT 5 cut(s) 235, 716, 802, 951, 1131
HpyCH4IV ACGT 6 cut(s) 306, 340, 503, 693, 839, 972
HpyCH4V TGCA 6 cut(s) 665, 723, 798, 814, 947, 996
HpyF10VI GCNNNNNNNGC 5 cut(s) 639, 654, 671, 1172, 1178
HpyF3I CTNAG 3 cut(s) 732, 850, 1113
HpySE526I ACGT 6 cut(s) 306, 340, 503, 693, 839, 972
Hsp92I GRCGYC 1 cut(s) 972
HspAI GCGC 1 cut(s) 400
Ksp22I TGATCA 1 cut(s) 180
KspAI GTTAAC 1 cut(s) 466
Kzo9I GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 4 cut(s) 490, 523, 706, 829
Lsp1109I GCAGC 4 cut(s) 677, 844, 875, 1159
LweI GCATC 2 cut(s) 1153, 1159
MaeI CTAG 1 cut(s) 1088
MaeII ACGT 6 cut(s) 306, 340, 503, 693, 839, 972
MaeIII GTNAC 7 cut(s) 50, 334, 409, 725, 806, 893, 1102
MalI GATC 6 cut(s) 182, 266, 486, 515, 933, 1258
MboI GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
MboII GAAGA 5 cut(s) 22, 547, 751, 1147, 1229
MflI RGATCY 2 cut(s) 484, 1256
MhlI GDGCHC 4 cut(s) 495, 528, 711, 1097
MluCI AATT 2 cut(s) 701, 903
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 1 cut(s) 1050
MroXI GAANNNNTTC 1 cut(s) 444
MseI TTAA 4 cut(s) 288, 429, 465, 1267
MslI CAYNNNNRTG 1 cut(s) 983
MspA1I CMGCKG 1 cut(s) 255
MspI CCGG 2 cut(s) 327, 820
MspR9I CCNGG 4 cut(s) 332, 607, 639, 960
Mva1269I GAATGC 1 cut(s) 1038
MvaI CCWGG 4 cut(s) 332, 607, 639, 960
MwoI GCNNNNNNNGC 5 cut(s) 639, 654, 671, 1172, 1178
NcoI CCATGG 2 cut(s) 519, 669
NdeII GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
NlaIV GGNNCC 1 cut(s) 525
NmuCI GTSAC 5 cut(s) 409, 725, 806, 893, 1102
NspI RCATGY 3 cut(s) 814, 988, 1007
PceI AGGCCT 2 cut(s) 605, 855
PciI ACATGT 1 cut(s) 984
PciSI GCTCTTC 1 cut(s) 35
PcsI WCGNNNNNNNCGW 1 cut(s) 509
PctI GAATGC 1 cut(s) 1038
PdmI GAANNNNTTC 1 cut(s) 444
PfeI GAWTC 2 cut(s) 445, 1051
PflFI GACNNNGTC 1 cut(s) 380
PkrI GCNGC 5 cut(s) 151, 667, 834, 890, 1174
Ple19I CGATCG 1 cut(s) 516
PleI GAGTC 1 cut(s) 722
PpsI GAGTC 1 cut(s) 722
Ppu21I YACGTR 1 cut(s) 307
PscI ACATGT 1 cut(s) 984
PsiI TTATAA 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 711
Psp6I CCWGG 4 cut(s) 330, 605, 637, 958
PspEI GGTNACC 2 cut(s) 50, 1102
PspFI CCCAGC 1 cut(s) 496
PspGI CCWGG 4 cut(s) 330, 605, 637, 958
PspN4I GGNNCC 1 cut(s) 525
PspPI GGNCC 3 cut(s) 151, 310, 632
PsuI RGATCY 2 cut(s) 484, 1256
PsyI GACNNNGTC 1 cut(s) 380
PvuI CGATCG 1 cut(s) 516
RseI CAYNNNNRTG 1 cut(s) 983
SacI GAGCTC 1 cut(s) 711
SalI GTCGAC 1 cut(s) 269
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 4 cut(s) 288, 429, 465, 1267
SatI GCNGC 5 cut(s) 150, 666, 833, 889, 1173
Sau3AI GATC 6 cut(s) 180, 264, 484, 513, 931, 1256
Sau96I GGNCC 3 cut(s) 151, 310, 632
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 4 cut(s) 332, 607, 639, 960
SduI GDGCHC 4 cut(s) 495, 528, 711, 1097
SfaNI GCATC 2 cut(s) 1153, 1159
SinI GGWCC 1 cut(s) 310
SmiMI CAYNNNNRTG 1 cut(s) 983
SmlI CTYRAG 4 cut(s) 683, 938, 1205, 1248
SmoI CTYRAG 4 cut(s) 683, 938, 1205, 1248
Sse9I AATT 2 cut(s) 701, 903
SseBI AGGCCT 2 cut(s) 605, 855
SsiI CCGC 3 cut(s) 149, 255, 891
SspI AATATT 1 cut(s) 1231
SspMI CTAG 1 cut(s) 1088
SstI GAGCTC 1 cut(s) 711
StuI AGGCCT 2 cut(s) 605, 855
StyD4I CCNGG 4 cut(s) 330, 605, 637, 958
StyI CCWWGG 3 cut(s) 519, 669, 1033
TaaI ACNGT 5 cut(s) 235, 716, 802, 951, 1131
TaiI ACGT 6 cut(s) 309, 343, 506, 696, 842, 975
TaqI TCGA 7 cut(s) 249, 270, 348, 507, 653, 711, 964
TasI AATT 2 cut(s) 701, 903
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 2 cut(s) 445, 1051
Tru1I TTAA 4 cut(s) 288, 429, 465, 1267
Tru9I TTAA 4 cut(s) 288, 429, 465, 1267
TscAI CASTG 3 cut(s) 649, 730, 954
TseFI GTSAC 5 cut(s) 409, 725, 806, 893, 1102
TseI GCWGC 4 cut(s) 665, 832, 888, 1172
Tsp45I GTSAC 5 cut(s) 409, 725, 806, 893, 1102
TspDTI ATGAA 3 cut(s) 22, 714, 856
TspGWI ACGGA 2 cut(s) 794, 1083
TspRI CASTG 3 cut(s) 649, 730, 954
Tth111I GACNNNGTC 1 cut(s) 380
VpaK11BI GGWCC 1 cut(s) 310
XceI RCATGY 3 cut(s) 814, 988, 1007
XmiI GTMKAC 2 cut(s) 141, 270
XmnI GAANNNNTTC 1 cut(s) 444
XspI CTAG 1 cut(s) 1088
ZraI GACGTC 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.