Prupe.7G160000_v2.0.a1

respiratory chain complex III assembly

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16667952 .. 16669705
1754 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G160000.1

Sequence Viewer

Length: 1284 bp
ATGAATTTTATCTTGGAGCTCCTGCTTCTCATTTCCACTGCCCTCAATTACCTTGCTACCCTTATCTCCCCTCGTCATGATCTTCATGATCGTCATGAGGACCTTACTTTCATCATTCGCCAGGACTACAGGCCACCCAACCAAGTCTACGACGCCGCCGAGCGCTACCTCCCAACCATTAACTTAATCAATCCCTCCACCCGAACCATCCAAGTGAGCAAAACGCAGCGGCAAGAGACCGTCAAGCTTGCCATGGAAAGCGGTGAGCAAGTCCCCGACACCTTTGAGGACATTAACCTCAACTGGCGTTACGTGGTCGAAACATTCCGTGACGGCAGCGTAGAACATCGCTTTGAGCTAACGTTCCAAAAGAAACACAAAGAAAAAGTCATGAGCTCCTACTTACCCTATGTGGTTGGTCGGGCCGAAGCCATTAAAAAAGAGGAAAAGATTCTCAAACTTTCTAACCTTACCAACTCATCAGTGGATTTGGAGCACCCAGCTACGTTCGAGACGATCGCCATGGAGCCCGACCTGAAGATAAAGATTATGAAGGACTTGGACAGGTTTGTGGCCAGGAGGGAGTTTTATAAGAAGGTGGGCAAGGCTTGGAAAAGAGGCTACTTGTTGTATGGCCCTCCTGGTACTGGAAAATCCAGCCTGATTGCGGCCATGGCTAATCATCTCAAGTTTGATGTGTTTGATTTGGAGCTTGCTAGTATTCGCAGCGACTCTCATTTGAAGAGCGTGGTTCTGTCCACTACAAATCGTTCCATTTTGGTGATTGAGGATATTGATTGCTCCGTCCATAGTAAAGATAACCGGTTCACACTCTCAGGCCTACTAAACTTCATGGATGGTCTTTGGTCAAGTTGTGGTGATGAGAGAGTTATTGTGTTCACCACAAACCACAAGGATCGTCTCGACCCTGTATTGCTGCGTCCTGGTCGAATGGACGTCCACATTCACATGTCTTATTGCACACCGAGTGCGTTTAGGATTTTGGCCTCCAACTACCTTGGAATTCAAGACTTCGACAGCCATCGGCTTAAGGGAGAAATCGTAGGGTTGCTAGAGAGCACAAAGGTCACCCCTGCTGACATTTGTGAAGATTTCTTGAAGGAAAATGACGATGATGTTGATGTTGATGATGATGATGTTGATGCTGCTCTTGAAAGAGTTGTCAAGTTTCTCAAACTTAGGAAGCTTGAAGGGGCTAATAATGTTGATGAGACAGAAACTCAAGAAGAAGAAAAAGCAGGAAATGGACCTGAAAGTGAATGA

Protein Analysis

428

Amino Acids

48.83

Weight (kDa)

5.37

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022492)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AatII GACGTC 1 cut(s) 960
AccI GTMKAC 1 cut(s) 147
AciI CCGC 4 cut(s) 156, 229, 261, 668
AclI AACGTT 1 cut(s) 362
AclWI GGATC 1 cut(s) 924
AcoI YGGCCR 2 cut(s) 573, 669
AcsI RAATTY 2 cut(s) 4, 1023
AcuI CTGAAG 1 cut(s) 557
AcyI GRCGYC 2 cut(s) 153, 957
AdeI CACNNNGTG 1 cut(s) 989
AfaI GTAC 1 cut(s) 646
AfeI AGCGCT 1 cut(s) 164
AfiI CCNNNNNNNGG 2 cut(s) 647, 667
AflII CTTAAG 1 cut(s) 1049
AflIII ACRYGT 1 cut(s) 969
AgeI ACCGGT 1 cut(s) 822
AgsI TTSAA 5 cut(s) 742, 1028, 1120, 1175, 1211
AjnI CCWGG 4 cut(s) 120, 575, 640, 943
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AluBI AGCT 7 cut(s) 19, 247, 358, 396, 503, 712, 1207
AluI AGCT 7 cut(s) 19, 247, 358, 396, 503, 712, 1207
Alw21I GWGCWC 4 cut(s) 21, 398, 498, 1082
Alw26I GTCTC 4 cut(s) 230, 506, 926, 1226
AlwI GGATC 1 cut(s) 924
Aor51HI AGCGCT 1 cut(s) 164
AoxI GGCC 7 cut(s) 131, 423, 573, 634, 669, 838, 1005
ApeKI GCWGC 5 cut(s) 226, 336, 726, 937, 1166
ApoI RAATTY 2 cut(s) 4, 1023
ArsI GACNNNNNNTTYG 2 cut(s) 372, 404
AsiGI ACCGGT 1 cut(s) 822
Asp700I GAANNNNTTC 1 cut(s) 450
AspLEI GCGC 1 cut(s) 165
AspS9I GGNCC 4 cut(s) 100, 423, 635, 1268
AsuHPI GGTGA 5 cut(s) 275, 793, 890, 892, 1081
AvaII GGWCC 2 cut(s) 100, 1268
BalI TGGCCA 1 cut(s) 575
BanII GRGCYC 3 cut(s) 21, 398, 531
Bbv12I GWGCWC 4 cut(s) 21, 398, 498, 1082
BbvI GCAGC 5 cut(s) 238, 348, 738, 924, 1153
BccI CCATC 3 cut(s) 215, 851, 1050
BceAI ACGGC 1 cut(s) 349
BciT130I CCWGG 4 cut(s) 122, 577, 642, 945
BcoDI GTCTC 4 cut(s) 230, 506, 926, 1226
BfaI CTAG 2 cut(s) 717, 1073
BfmI CTRYAG 1 cut(s) 127
BfoI RGCGCY 1 cut(s) 166
BfrI CTTAAG 1 cut(s) 1049
BisI GCNGC 8 cut(s) 156, 227, 230, 337, 669, 727, 938, 1167
BlsI GCNGC 8 cut(s) 157, 228, 231, 338, 670, 728, 939, 1168
Bme1390I CCNGG 4 cut(s) 122, 577, 642, 945
Bme18I GGWCC 2 cut(s) 100, 1268
BmgT120I GGNCC 4 cut(s) 100, 423, 635, 1268
BmiI GGNNCC 1 cut(s) 528
BmrFI CCNGG 4 cut(s) 122, 577, 642, 945
BmsI GCATC 1 cut(s) 1153
BpuEI CTTGAG 2 cut(s) 671, 1227
BsaAI YACGTR 1 cut(s) 313
BsaHI GRCGYC 2 cut(s) 153, 957
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 4 cut(s) 252, 522, 672, 1018
BsaWI WCCGGW 1 cut(s) 822
BsaXI ACNNNNNCTCC 2 cut(s) 1047, 1077
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 667
Bse118I RCCGGY 1 cut(s) 822
Bse1I ACTGG 2 cut(s) 308, 652
BseBI CCWGG 4 cut(s) 122, 577, 642, 945
BseDI CCNNGG 4 cut(s) 252, 522, 672, 1018
BseGI GGATG 2 cut(s) 207, 862
BseLI CCNNNNNNNGG 2 cut(s) 647, 667
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 2 cut(s) 308, 652
BseXI GCAGC 5 cut(s) 238, 348, 738, 924, 1153
BseYI CCCAGC 1 cut(s) 499
Bsh1285I CGRYCG 1 cut(s) 519
BshFI GGCC 7 cut(s) 133, 425, 575, 636, 671, 840, 1007
BshTI ACCGGT 1 cut(s) 822
BsiEI CGRYCG 1 cut(s) 519
BsiHKAI GWGCWC 4 cut(s) 21, 398, 498, 1082
BsiSI CCGG 1 cut(s) 823
BslFI GGGAC 1 cut(s) 257
BslI CCNNNNNNNGG 2 cut(s) 647, 667
BsmAI GTCTC 4 cut(s) 230, 506, 926, 1226
BsmBI CGTCTC 2 cut(s) 506, 926
BsmFI GGGAC 1 cut(s) 257
BsnI GGCC 7 cut(s) 133, 425, 575, 636, 671, 840, 1007
Bso31I GGTCTC 1 cut(s) 230
Bsp1286I GDGCHC 5 cut(s) 21, 398, 498, 531, 1082
Bsp143I GATC 4 cut(s) 79, 88, 516, 916
Bsp19I CCATGG 3 cut(s) 252, 522, 672
BspACI CCGC 4 cut(s) 156, 229, 261, 668
BspANI GGCC 7 cut(s) 133, 425, 575, 636, 671, 840, 1007
BspCNI CTCAG 1 cut(s) 848
BspHI TCATGA 4 cut(s) 76, 85, 94, 390
BspLI GGNNCC 1 cut(s) 528
BspPI GGATC 1 cut(s) 924
BspQI GCTCTTC 1 cut(s) 737
BspTI CTTAAG 1 cut(s) 1049
BspTNI GGTCTC 1 cut(s) 230
BsrFI RCCGGY 1 cut(s) 822
BsrI ACTGG 2 cut(s) 308, 652
BssAI RCCGGY 1 cut(s) 822
BssECI CCNNGG 4 cut(s) 252, 522, 672, 1018
BssMI GATC 4 cut(s) 79, 88, 516, 916
BssNI GRCGYC 2 cut(s) 153, 957
BssT1I CCWWGG 4 cut(s) 252, 522, 672, 1018
Bst2UI CCWGG 4 cut(s) 122, 577, 642, 945
Bst4CI ACNGT 1 cut(s) 241
Bst6I CTCTTC 1 cut(s) 737
BstACI GRCGYC 2 cut(s) 153, 957
BstAFI CTTAAG 1 cut(s) 1049
BstBAI YACGTR 1 cut(s) 313
BstC8I GCNNGC 2 cut(s) 249, 714
BstDEI CTNAG 2 cut(s) 835, 1199
BstDSI CCRYGG 3 cut(s) 252, 522, 672
BstEII GGTNACC 1 cut(s) 1087
BstF5I GGATG 2 cut(s) 207, 862
BstH2I RGCGCY 1 cut(s) 166
BstHHI GCGC 1 cut(s) 165
BstKTI GATC 4 cut(s) 82, 91, 519, 919
BstMAI GTCTC 4 cut(s) 230, 506, 926, 1226
BstMBI GATC 4 cut(s) 79, 88, 516, 916
BstMCI CGRYCG 1 cut(s) 519
BstMWI GCNNNNNNNGC 1 cut(s) 674
BstNI CCWGG 4 cut(s) 122, 577, 642, 945
BstNSI RCATGY 1 cut(s) 973
BstPI GGTNACC 1 cut(s) 1087
BstSCI CCNGG 4 cut(s) 120, 575, 640, 943
BstSFI CTRYAG 1 cut(s) 127
BstV1I GCAGC 5 cut(s) 238, 348, 738, 924, 1153
BsuRI GGCC 7 cut(s) 133, 425, 575, 636, 671, 840, 1007
BtgI CCRYGG 3 cut(s) 252, 522, 672
BtgZI GCGATG 1 cut(s) 332
BtsCI GGATG 2 cut(s) 207, 862
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 2 cut(s) 36, 489
Cac8I GCNNGC 2 cut(s) 249, 714
CciI TCATGA 4 cut(s) 76, 85, 94, 390
CfoI GCGC 1 cut(s) 165
Cfr10I RCCGGY 1 cut(s) 822
Cfr13I GGNCC 4 cut(s) 100, 423, 635, 1268
CseI GACGC 2 cut(s) 161, 929
Csp6I GTAC 1 cut(s) 645
CspAI ACCGGT 1 cut(s) 822
CviAII CATG 9 cut(s) 77, 86, 95, 253, 391, 523, 673, 853, 970
CviQI GTAC 1 cut(s) 645
DdeI CTNAG 2 cut(s) 835, 1199
DpnI GATC 4 cut(s) 81, 90, 518, 918
DpnII GATC 4 cut(s) 79, 88, 516, 916
DraIII CACNNNGTG 1 cut(s) 989
EaeI YGGCCR 2 cut(s) 573, 669
Eam1104I CTCTTC 1 cut(s) 737
EarI CTCTTC 1 cut(s) 737
Ecl136II GAGCTC 2 cut(s) 19, 396
Eco130I CCWWGG 4 cut(s) 252, 522, 672, 1018
Eco147I AGGCCT 1 cut(s) 840
Eco24I GRGCYC 3 cut(s) 21, 398, 531
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 2 cut(s) 100, 1268
Eco47III AGCGCT 1 cut(s) 164
Eco53kI GAGCTC 2 cut(s) 19, 396
Eco57I CTGAAG 1 cut(s) 557
Eco91I GGTNACC 1 cut(s) 1087
EcoICRI GAGCTC 2 cut(s) 19, 396
EcoO109I RGGNCCY 1 cut(s) 100
EcoO65I GGTNACC 1 cut(s) 1087
EcoRI GAATTC 1 cut(s) 1023
EcoRII CCWGG 4 cut(s) 120, 575, 640, 943
EcoT14I CCWWGG 4 cut(s) 252, 522, 672, 1018
EcoT38I GRGCYC 3 cut(s) 21, 398, 531
ErhI CCWWGG 4 cut(s) 252, 522, 672, 1018
Esp3I CGTCTC 2 cut(s) 506, 926
FaeI CATG 9 cut(s) 80, 89, 98, 256, 394, 526, 676, 856, 973
FaqI GGGAC 1 cut(s) 257
FatI CATG 9 cut(s) 76, 85, 94, 252, 390, 522, 672, 852, 969
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 8 cut(s) 156, 227, 230, 337, 669, 727, 938, 1167
FokI GGATG 2 cut(s) 194, 869
FriOI GRGCYC 3 cut(s) 21, 398, 531
Fsp4HI GCNGC 8 cut(s) 156, 227, 230, 337, 669, 727, 938, 1167
FspBI CTAG 2 cut(s) 717, 1073
GlaI GCGC 1 cut(s) 164
GluI GCNGC 8 cut(s) 156, 227, 230, 337, 669, 727, 938, 1167
GsaI CCCAGC 1 cut(s) 503
HaeII RGCGCY 1 cut(s) 166
HaeIII GGCC 7 cut(s) 133, 425, 575, 636, 671, 840, 1007
HapII CCGG 1 cut(s) 823
HgaI GACGC 2 cut(s) 161, 929
HhaI GCGC 1 cut(s) 165
Hin1I GRCGYC 2 cut(s) 153, 957
Hin1II CATG 9 cut(s) 80, 89, 98, 256, 394, 526, 676, 856, 973
Hin6I GCGC 1 cut(s) 163
HinP1I GCGC 1 cut(s) 163
HindIII AAGCTT 2 cut(s) 245, 1205
HinfI GANTC 2 cut(s) 451, 731
HpaII CCGG 1 cut(s) 823
HphI GGTGA 5 cut(s) 275, 793, 890, 892, 1081
Hpy166II GTNNAC 5 cut(s) 148, 759, 828, 900, 961
Hpy8I GTNNAC 5 cut(s) 148, 759, 828, 900, 961
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 4 cut(s) 547, 589, 1114, 1205
HpyCH4III ACNGT 1 cut(s) 241
HpyCH4IV ACGT 4 cut(s) 312, 362, 506, 957
HpyCH4V TGCA 1 cut(s) 981
HpyF10VI GCNNNNNNNGC 1 cut(s) 674
HpyF3I CTNAG 2 cut(s) 835, 1199
HpySE526I ACGT 4 cut(s) 312, 362, 506, 957
Hsp92I GRCGYC 2 cut(s) 153, 957
Hsp92II CATG 9 cut(s) 80, 89, 98, 256, 394, 526, 676, 856, 973
HspAI GCGC 1 cut(s) 163
Kzo9I GATC 4 cut(s) 79, 88, 516, 916
LguI GCTCTTC 1 cut(s) 737
LmnI GCTCC 7 cut(s) 16, 24, 401, 493, 526, 709, 806
Lsp1109I GCAGC 5 cut(s) 238, 348, 738, 924, 1153
LweI GCATC 1 cut(s) 1153
MaeI CTAG 2 cut(s) 717, 1073
MaeII ACGT 4 cut(s) 312, 362, 506, 957
MaeIII GTNAC 3 cut(s) 308, 329, 1087
MalI GATC 4 cut(s) 81, 90, 518, 918
MboI GATC 4 cut(s) 79, 88, 516, 916
MboII GAAGA 6 cut(s) 74, 550, 754, 1121, 1259, 1262
MhlI GDGCHC 5 cut(s) 21, 398, 498, 531, 1082
MlsI TGGCCA 1 cut(s) 575
MluCI AATT 3 cut(s) 4, 46, 1023
MluNI TGGCCA 1 cut(s) 575
MlyI GAGTC 1 cut(s) 725
MmeI TCCRAC 1 cut(s) 1035
Mox20I TGGCCA 1 cut(s) 575
MroXI GAANNNNTTC 1 cut(s) 450
MscI TGGCCA 1 cut(s) 575
MseI TTAA 5 cut(s) 180, 185, 294, 435, 1050
MslI CAYNNNNRTG 3 cut(s) 212, 779, 968
Msp20I TGGCCA 1 cut(s) 575
MspA1I CMGCKG 1 cut(s) 229
MspCI CTTAAG 1 cut(s) 1049
MspI CCGG 1 cut(s) 823
MspR9I CCNGG 4 cut(s) 122, 577, 642, 945
MvaI CCWGG 4 cut(s) 122, 577, 642, 945
MwoI GCNNNNNNNGC 1 cut(s) 674
NcoI CCATGG 3 cut(s) 252, 522, 672
NdeII GATC 4 cut(s) 79, 88, 516, 916
NlaIII CATG 9 cut(s) 80, 89, 98, 256, 394, 526, 676, 856, 973
NlaIV GGNNCC 1 cut(s) 528
NmeAIII GCCGAG 1 cut(s) 184
NmuCI GTSAC 2 cut(s) 329, 1087
NspI RCATGY 1 cut(s) 973
PagI TCATGA 4 cut(s) 76, 85, 94, 390
PceI AGGCCT 1 cut(s) 840
PciI ACATGT 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 737
PcsI WCGNNNNNNNCGW 2 cut(s) 156, 512
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 1 cut(s) 451
PinAI ACCGGT 1 cut(s) 822
PkrI GCNGC 8 cut(s) 157, 228, 231, 338, 670, 728, 939, 1168
Ple19I CGATCG 1 cut(s) 519
PleI GAGTC 1 cut(s) 725
PpsI GAGTC 1 cut(s) 725
Ppu21I YACGTR 1 cut(s) 313
PpuMI RGGWCCY 1 cut(s) 100
PscI ACATGT 1 cut(s) 969
PsiI TTATAA 1 cut(s) 591
Psp124BI GAGCTC 2 cut(s) 21, 398
Psp1406I AACGTT 1 cut(s) 362
Psp5II RGGWCCY 1 cut(s) 100
Psp6I CCWGG 4 cut(s) 120, 575, 640, 943
PspEI GGTNACC 1 cut(s) 1087
PspFI CCCAGC 1 cut(s) 499
PspGI CCWGG 4 cut(s) 120, 575, 640, 943
PspN4I GGNNCC 1 cut(s) 528
PspPI GGNCC 4 cut(s) 100, 423, 635, 1268
PspPPI RGGWCCY 1 cut(s) 100
PvuI CGATCG 1 cut(s) 519
RsaI GTAC 1 cut(s) 646
RsaNI GTAC 1 cut(s) 645
RseI CAYNNNNRTG 3 cut(s) 212, 779, 968
SacI GAGCTC 2 cut(s) 21, 398
SapI GCTCTTC 1 cut(s) 737
SaqAI TTAA 5 cut(s) 180, 185, 294, 435, 1050
SatI GCNGC 8 cut(s) 156, 227, 230, 337, 669, 727, 938, 1167
Sau3AI GATC 4 cut(s) 79, 88, 516, 916
Sau96I GGNCC 4 cut(s) 100, 423, 635, 1268
SchI GAGTC 1 cut(s) 725
ScrFI CCNGG 4 cut(s) 122, 577, 642, 945
SduI GDGCHC 5 cut(s) 21, 398, 498, 531, 1082
SfaNI GCATC 1 cut(s) 1153
SfcI CTRYAG 1 cut(s) 127
SinI GGWCC 2 cut(s) 100, 1268
SmiMI CAYNNNNRTG 3 cut(s) 212, 779, 968
SmlI CTYRAG 3 cut(s) 686, 1049, 1242
SmoI CTYRAG 3 cut(s) 686, 1049, 1242
Sse9I AATT 3 cut(s) 4, 46, 1023
SseBI AGGCCT 1 cut(s) 840
SsiI CCGC 4 cut(s) 156, 229, 261, 668
SspMI CTAG 2 cut(s) 717, 1073
SstI GAGCTC 2 cut(s) 21, 398
StuI AGGCCT 1 cut(s) 840
StyD4I CCNGG 4 cut(s) 120, 575, 640, 943
StyI CCWWGG 4 cut(s) 252, 522, 672, 1018
TaaI ACNGT 1 cut(s) 241
TaiI ACGT 4 cut(s) 315, 365, 509, 960
TaqI TCGA 5 cut(s) 318, 510, 924, 949, 1035
TasI AATT 3 cut(s) 4, 46, 1023
TauI GCSGC 3 cut(s) 158, 232, 671
TfiI GAWTC 1 cut(s) 451
Tru1I TTAA 5 cut(s) 180, 185, 294, 435, 1050
Tru9I TTAA 5 cut(s) 180, 185, 294, 435, 1050
TscAI CASTG 2 cut(s) 43, 489
TseFI GTSAC 2 cut(s) 329, 1087
TseI GCWGC 5 cut(s) 226, 336, 726, 937, 1166
Tsp45I GTSAC 2 cut(s) 329, 1087
TspDTI ATGAA 5 cut(s) 17, 74, 100, 566, 841
TspGWI ACGGA 2 cut(s) 317, 793
TspRI CASTG 2 cut(s) 43, 489
Vha464I CTTAAG 1 cut(s) 1049
VpaK11BI GGWCC 2 cut(s) 100, 1268
XapI RAATTY 2 cut(s) 4, 1023
XceI RCATGY 1 cut(s) 973
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 147
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 2 cut(s) 717, 1073
ZraI GACGTC 1 cut(s) 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.