Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0022492

Physical Location & Seq

Genomic Coordinates Forward (+)

16660092 .. 16661962

Gene Structure 1871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G159900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGAATTATCATCATGGCCTTACTTTGATCATCCGCGAGGAGGGCTCGCCATCCAACCAAGTCTACGACGCCGCCCACCTCTACCTCCCAAGCATTCAATTGATCAATCCCTCCACTCGGACCATCGGAGTCACCAAAACACCGCGCAGAGAAACGGTCAAGCTCGCCATTGAAAGCGGTGAGCAAGTCCCCGACACCTTTGACTGCATTGACCTGAACTGGCTTTACGTGGTCGAAAAATGTCCGGACGGCTGTGTTGAACGTCGCTTTGAGCTGACGTTTCAAAAGGAACACAAAGACAAAGTCATGACCTTCTACTTGGCCTATGTTGTTCGTCGCGCCGAAGTCATTAAACAAGAGAGCAAGATTCTCAACCTCCGCAAAGTTAACTCATACGACCAAGTCGAATTCGAGCACCCGGCTACGTTTGAGACGATAGCCATGGAGCCCGGCCTAAAGCGAAAGATTATAAAGGATTTGGAGAGGTTTGTGAGCAGGAGGGAGTTTTATAAGAAGGTGGGCAAGGCTTGGAAAAGAGGCTACTTGTTGTATGGCCCACCTGGCACTGGAAAATCCAGCTTGATTGCAGCCATAGCTAATTATCTCAAGTTTGATGTGTTTGAATTGGAGCTTGATGCTATTGACAGTGACTCTGGGTTGAAGAAGGCGTTGCTTTCCACTACAAATCGTTCCATTTTGGTGATTGAGGATATTGATTGTTCCGTCAATAAAGATAAGGAAAACCGGTTCACACTGTCAGGCCTACTAAACTTCATGGATGGTTTGTGGTCAAGTTGCGGAGATGAGAGAATTATTGTGTTCACAACAAACCACAAGGATCGGCTTGACCCTGCATTGTTGCGTCCTGGCAGAATGGATGTCCACATTTACATGGGTTATTGCACCCCAAGTGCGTTTAAGGTTTTGGCCTCCAACTACCTTGGCATTCCTGACTTGGACGGTCATGGCCTTTACGGAGAAATCGTAGGCTTGCTAGAGAGCACAAAGGTTACCCCTGCTGAGATTTGTGAGGAACTACTGAAGACAAATGATGAGGATGATGATGAAGATGCTGATGCTGCTCTCGAAAGACTTGTCGACTTTTTCAAACTCAAGAAGCTTGAAGGTGATAAACCCGAAATTGAAGAGGCAAAAAAGCAGAAAATGGATGTCGATGTTAATAATGTTAATATTTTCAAGAGAGAAACTGAAGAAGAAAGAAGGGAGGAAATGGATGTCAAAGTGAATGATGACATAGAAAATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0033108 GO:0034551 GO:0034622 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

423

Amino Acids

48.35

Weight (kDa)

5.17

Isoelectric Point (pI)

44.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0022492)

Species	Orthologous Gene IDs
prunus_persica	Prupe.7G159700_v2.0.a1 Prupe.7G159800_v2.0.a1 Prupe.7G159900_v2.0.a1 Prupe.7G160000_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	470, 510
AccI	GTMKAC	2 cut(s)	63, 1098
AccII	CGCG	3 cut(s)	36, 145, 339
AccIII	TCCGGA	1 cut(s)	244
AciI	CCGC	6 cut(s)	34, 72, 143, 177, 379, 798
AclWI	GGATC	1 cut(s)	846
AcsI	RAATTY	1 cut(s)	407
AcuI	CTGAAG	2 cut(s)	1061, 1230
AcyI	GRCGYC	1 cut(s)	69
AfiI	CCNNNNNNNGG	3 cut(s)	40, 117, 566
AgeI	ACCGGT	1 cut(s)	744
AjnI	CCWGG	2 cut(s)	559, 865
AloI	GAACNNNNNNTCC	2 cut(s)	731, 763
AluBI	AGCT	6 cut(s)	163, 274, 579, 596, 631, 1120
AluI	AGCT	6 cut(s)	163, 274, 579, 596, 631, 1120
Alw21I	GWGCWC	2 cut(s)	417, 1004
Alw26I	GTCTC	1 cut(s)	425
AlwI	GGATC	1 cut(s)	846
Aor13HI	TCCGGA	1 cut(s)	244
AoxI	GGCC	7 cut(s)	16, 321, 451, 553, 760, 927, 967
ApeKI	GCWGC	2 cut(s)	587, 1079
ApoI	RAATTY	1 cut(s)	407
ArsI	GACNNNNNNTTYG	4 cut(s)	288, 320, 1080, 1112
AsiGI	ACCGGT	1 cut(s)	744
AspLEI	GCGC	2 cut(s)	147, 341
AspS9I	GGNCC	2 cut(s)	120, 554
AsuC2I	CCSGG	2 cut(s)	419, 450
AsuHPI	GGTGA	4 cut(s)	124, 191, 712, 1139
AvaII	GGWCC	1 cut(s)	120
BanII	GRGCYC	2 cut(s)	47, 450
BbsI	GAAGAC	1 cut(s)	1049
Bbv12I	GWGCWC	2 cut(s)	417, 1004
BbvI	GCAGC	2 cut(s)	599, 1066
BccI	CCATC	3 cut(s)	58, 131, 773
BceAI	ACGGC	1 cut(s)	265
BciT130I	CCWGG	2 cut(s)	561, 867
BclI	TGATCA	2 cut(s)	27, 102
BcnI	CCSGG	2 cut(s)	419, 450
BcoDI	GTCTC	1 cut(s)	425
BfaI	CTAG	1 cut(s)	995
BglI	GCCNNNNNGGC	1 cut(s)	561
BisI	GCNGC	3 cut(s)	72, 588, 1080
BlsI	GCNGC	3 cut(s)	73, 589, 1081
Bme1390I	CCNGG	4 cut(s)	419, 450, 561, 867
Bme18I	GGWCC	1 cut(s)	120
BmgT120I	GGNCC	2 cut(s)	120, 554
BmiI	GGNNCC	1 cut(s)	447
BmrFI	CCNGG	4 cut(s)	419, 450, 561, 867
BmsI	GCATC	3 cut(s)	625, 1060, 1066
BpiI	GAAGAC	1 cut(s)	1049
BplI	GAGNNNNNCTC	2 cut(s)	29, 61
BpuEI	CTTGAG	2 cut(s)	590, 1097
BpuMI	CCSGG	2 cut(s)	419, 450
BsaAI	YACGTR	1 cut(s)	229
BsaHI	GRCGYC	1 cut(s)	69
BsaJI	CCNNGG	2 cut(s)	441, 940
BsaWI	WCCGGW	2 cut(s)	244, 744
BsaXI	ACNNNNNCTCC	2 cut(s)	969, 999
Bsc4I	CCNNNNNNNGG	3 cut(s)	40, 117, 566
Bse118I	RCCGGY	1 cut(s)	744
Bse1I	ACTGG	2 cut(s)	224, 571
BseAI	TCCGGA	1 cut(s)	244
BseBI	CCWGG	2 cut(s)	561, 867
BseDI	CCNNGG	2 cut(s)	441, 940
BseGI	GGATG	7 cut(s)	30, 50, 784, 883, 1063, 1174, 1240
BseLI	CCNNNNNNNGG	3 cut(s)	40, 117, 566
BseMII	CTCAG	1 cut(s)	1011
BseNI	ACTGG	2 cut(s)	224, 571
BseRI	GAGGAG	1 cut(s)	53
BseXI	GCAGC	2 cut(s)	599, 1066
Bsh1236I	CGCG	3 cut(s)	36, 145, 339
BshFI	GGCC	7 cut(s)	18, 323, 453, 555, 762, 929, 969
BshTI	ACCGGT	1 cut(s)	744
BsiHKAI	GWGCWC	2 cut(s)	417, 1004
BsiSI	CCGG	4 cut(s)	245, 419, 450, 745
BslFI	GGGAC	1 cut(s)	173
BslI	CCNNNNNNNGG	3 cut(s)	40, 117, 566
BsmAI	GTCTC	1 cut(s)	425
BsmBI	CGTCTC	1 cut(s)	425
BsmFI	GGGAC	1 cut(s)	173
BsmI	GAATGC	2 cut(s)	93, 945
BsnI	GGCC	7 cut(s)	18, 323, 453, 555, 762, 929, 969
Bsp1286I	GDGCHC	4 cut(s)	47, 417, 450, 1004
Bsp13I	TCCGGA	1 cut(s)	244
Bsp143I	GATC	3 cut(s)	27, 102, 838
Bsp19I	CCATGG	1 cut(s)	441
BspACI	CCGC	6 cut(s)	34, 72, 143, 177, 379, 798
BspANI	GGCC	7 cut(s)	18, 323, 453, 555, 762, 929, 969
BspCNI	CTCAG	1 cut(s)	1012
BspEI	TCCGGA	1 cut(s)	244
BspFNI	CGCG	3 cut(s)	36, 145, 339
BspHI	TCATGA	1 cut(s)	306
BspLI	GGNNCC	1 cut(s)	447
BspPI	GGATC	1 cut(s)	846
BsrFI	RCCGGY	1 cut(s)	744
BsrI	ACTGG	2 cut(s)	224, 571
BssAI	RCCGGY	1 cut(s)	744
BssECI	CCNNGG	2 cut(s)	441, 940
BssMI	GATC	3 cut(s)	27, 102, 838
BssNI	GRCGYC	1 cut(s)	69
BssT1I	CCWWGG	2 cut(s)	441, 940
Bst2UI	CCWGG	2 cut(s)	561, 867
Bst4CI	ACNGT	4 cut(s)	157, 647, 756, 962
Bst6I	CTCTTC	1 cut(s)	1140
BstACI	GRCGYC	1 cut(s)	69
BstBAI	YACGTR	1 cut(s)	229
BstC8I	GCNNGC	3 cut(s)	47, 165, 992
BstDEI	CTNAG	1 cut(s)	1020
BstDSI	CCRYGG	1 cut(s)	441
BstEII	GGTNACC	1 cut(s)	1009
BstF5I	GGATG	7 cut(s)	30, 50, 784, 883, 1063, 1174, 1240
BstFNI	CGCG	3 cut(s)	36, 145, 339
BstHHI	GCGC	2 cut(s)	147, 341
BstKTI	GATC	3 cut(s)	30, 105, 841
BstMAI	GTCTC	1 cut(s)	425
BstMBI	GATC	3 cut(s)	27, 102, 838
BstMWI	GCNNNNNNNGC	4 cut(s)	42, 561, 593, 1079
BstNI	CCWGG	2 cut(s)	561, 867
BstPI	GGTNACC	1 cut(s)	1009
BstSCI	CCNGG	4 cut(s)	417, 448, 559, 865
BstUI	CGCG	3 cut(s)	36, 145, 339
BstV1I	GCAGC	2 cut(s)	599, 1066
BstV2I	GAAGAC	1 cut(s)	1049
BsuRI	GGCC	7 cut(s)	18, 323, 453, 555, 762, 929, 969
BtgI	CCRYGG	1 cut(s)	441
BtsCI	GGATG	7 cut(s)	30, 50, 784, 883, 1063, 1174, 1240
BtsIMutI	CAGTG	3 cut(s)	564, 652, 752
Cac8I	GCNNGC	3 cut(s)	47, 165, 992
CciI	TCATGA	1 cut(s)	306
CfoI	GCGC	2 cut(s)	147, 341
Cfr10I	RCCGGY	1 cut(s)	744
Cfr13I	GGNCC	2 cut(s)	120, 554
CseI	GACGC	2 cut(s)	77, 851
CspAI	ACCGGT	1 cut(s)	744
CviAII	CATG	6 cut(s)	14, 307, 442, 775, 892, 965
DdeI	CTNAG	1 cut(s)	1020
DpnI	GATC	3 cut(s)	29, 104, 840
DpnII	GATC	3 cut(s)	27, 102, 838
Eam1104I	CTCTTC	1 cut(s)	1140
EarI	CTCTTC	1 cut(s)	1140
Eco130I	CCWWGG	2 cut(s)	441, 940
Eco147I	AGGCCT	1 cut(s)	762
Eco24I	GRGCYC	2 cut(s)	47, 450
Eco47I	GGWCC	1 cut(s)	120
Eco57I	CTGAAG	2 cut(s)	1061, 1230
Eco91I	GGTNACC	1 cut(s)	1009
EcoO65I	GGTNACC	1 cut(s)	1009
EcoRI	GAATTC	1 cut(s)	407
EcoRII	CCWGG	2 cut(s)	559, 865
EcoT14I	CCWWGG	2 cut(s)	441, 940
EcoT38I	GRGCYC	2 cut(s)	47, 450
ErhI	CCWWGG	2 cut(s)	441, 940
Esp3I	CGTCTC	1 cut(s)	425
FaeI	CATG	6 cut(s)	17, 310, 445, 778, 895, 968
FaqI	GGGAC	1 cut(s)	173
FatI	CATG	6 cut(s)	13, 306, 441, 774, 891, 964
FbaI	TGATCA	2 cut(s)	27, 102
FblI	GTMKAC	2 cut(s)	63, 1098
Fnu4HI	GCNGC	3 cut(s)	72, 588, 1080
FokI	GGATG	7 cut(s)	17, 37, 791, 890, 1070, 1181, 1247
FriOI	GRGCYC	2 cut(s)	47, 450
Fsp4HI	GCNGC	3 cut(s)	72, 588, 1080
FspBI	CTAG	1 cut(s)	995
GlaI	GCGC	2 cut(s)	146, 340
GluI	GCNGC	3 cut(s)	72, 588, 1080
HaeIII	GGCC	7 cut(s)	18, 323, 453, 555, 762, 929, 969
HapII	CCGG	4 cut(s)	245, 419, 450, 745
HgaI	GACGC	2 cut(s)	77, 851
HhaI	GCGC	2 cut(s)	147, 341
Hin1I	GRCGYC	1 cut(s)	69
Hin1II	CATG	6 cut(s)	17, 310, 445, 778, 895, 968
Hin6I	GCGC	2 cut(s)	145, 339
HinP1I	GCGC	2 cut(s)	145, 339
HincII	GTYRAC	2 cut(s)	388, 1099
HindII	GTYRAC	2 cut(s)	388, 1099
HindIII	AAGCTT	1 cut(s)	1118
HinfI	GANTC	3 cut(s)	129, 367, 650
HpaI	GTTAAC	1 cut(s)	388
HpaII	CCGG	4 cut(s)	245, 419, 450, 745
HphI	GGTGA	4 cut(s)	124, 191, 712, 1139
Hpy166II	GTNNAC	6 cut(s)	64, 388, 750, 822, 883, 1099
Hpy188I	TCNGA	2 cut(s)	120, 128
Hpy188III	TCNNGA	6 cut(s)	245, 307, 950, 1085, 1114, 1198
Hpy8I	GTNNAC	6 cut(s)	64, 388, 750, 822, 883, 1099
Hpy99I	CGWCG	3 cut(s)	71, 267, 339
HpyAV	CCTTC	5 cut(s)	322, 508, 658, 1118, 1215
HpyCH4III	ACNGT	4 cut(s)	157, 647, 756, 962
HpyCH4IV	ACGT	4 cut(s)	228, 262, 278, 425
HpyCH4V	TGCA	4 cut(s)	207, 587, 854, 903
HpyF10VI	GCNNNNNNNGC	4 cut(s)	42, 561, 593, 1079
HpyF3I	CTNAG	1 cut(s)	1020
HpySE526I	ACGT	4 cut(s)	228, 262, 278, 425
Hsp92I	GRCGYC	1 cut(s)	69
Hsp92II	CATG	6 cut(s)	17, 310, 445, 778, 895, 968
HspAI	GCGC	2 cut(s)	145, 339
Kpn2I	TCCGGA	1 cut(s)	244
Ksp22I	TGATCA	2 cut(s)	27, 102
KspAI	GTTAAC	1 cut(s)	388
Kzo9I	GATC	3 cut(s)	27, 102, 838
LmnI	GCTCC	2 cut(s)	445, 628
Lsp1109I	GCAGC	2 cut(s)	599, 1066
LweI	GCATC	3 cut(s)	625, 1060, 1066
MaeI	CTAG	1 cut(s)	995
MaeII	ACGT	4 cut(s)	228, 262, 278, 425
MaeIII	GTNAC	3 cut(s)	130, 647, 1009
MalI	GATC	3 cut(s)	29, 104, 840
MboI	GATC	3 cut(s)	27, 102, 838
MboII	GAAGA	6 cut(s)	673, 1054, 1079, 1157, 1223, 1226
MfeI	CAATTG	1 cut(s)	98
MhlI	GDGCHC	4 cut(s)	47, 417, 450, 1004
MluCI	AATT	7 cut(s)	4, 98, 407, 598, 623, 810, 1140
MlyI	GAGTC	2 cut(s)	138, 644
MmeI	TCCRAC	2 cut(s)	78, 957
MroI	TCCGGA	1 cut(s)	244
MseI	TTAA	5 cut(s)	351, 387, 918, 1179, 1188
MslI	CAYNNNNRTG	2 cut(s)	698, 890
MspI	CCGG	4 cut(s)	245, 419, 450, 745
MspR9I	CCNGG	4 cut(s)	419, 450, 561, 867
MunI	CAATTG	1 cut(s)	98
Mva1269I	GAATGC	2 cut(s)	93, 945
MvaI	CCWGG	2 cut(s)	561, 867
MvnI	CGCG	3 cut(s)	36, 145, 339
MwoI	GCNNNNNNNGC	4 cut(s)	42, 561, 593, 1079
NciI	CCSGG	2 cut(s)	419, 450
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	3 cut(s)	27, 102, 838
NlaIII	CATG	6 cut(s)	17, 310, 445, 778, 895, 968
NlaIV	GGNNCC	1 cut(s)	447
NmuCI	GTSAC	2 cut(s)	130, 647
PagI	TCATGA	1 cut(s)	306
PceI	AGGCCT	1 cut(s)	762
PcsI	WCGNNNNNNNCGW	3 cut(s)	402, 431, 981
PctI	GAATGC	2 cut(s)	93, 945
PfeI	GAWTC	1 cut(s)	367
PflFI	GACNNNGTC	2 cut(s)	302, 401
PinAI	ACCGGT	1 cut(s)	744
PkrI	GCNGC	3 cut(s)	73, 589, 1081
PleI	GAGTC	2 cut(s)	137, 644
PpsI	GAGTC	2 cut(s)	137, 644
Ppu21I	YACGTR	1 cut(s)	229
PsiI	TTATAA	2 cut(s)	470, 510
Psp6I	CCWGG	2 cut(s)	559, 865
PspEI	GGTNACC	1 cut(s)	1009
PspGI	CCWGG	2 cut(s)	559, 865
PspN4I	GGNNCC	1 cut(s)	447
PspPI	GGNCC	2 cut(s)	120, 554
PsrI	GAACNNNNNNTAC	2 cut(s)	209, 241
PsyI	GACNNNGTC	2 cut(s)	302, 401
RseI	CAYNNNNRTG	2 cut(s)	698, 890
SalI	GTCGAC	1 cut(s)	1097
SaqAI	TTAA	5 cut(s)	351, 387, 918, 1179, 1188
SatI	GCNGC	3 cut(s)	72, 588, 1080
Sau3AI	GATC	3 cut(s)	27, 102, 838
Sau96I	GGNCC	2 cut(s)	120, 554
SchI	GAGTC	2 cut(s)	138, 644
ScrFI	CCNGG	4 cut(s)	419, 450, 561, 867
SduI	GDGCHC	4 cut(s)	47, 417, 450, 1004
SfaNI	GCATC	3 cut(s)	625, 1060, 1066
SinI	GGWCC	1 cut(s)	120
SmiMI	CAYNNNNRTG	2 cut(s)	698, 890
SmlI	CTYRAG	2 cut(s)	605, 1112
SmoI	CTYRAG	2 cut(s)	605, 1112
Sse9I	AATT	7 cut(s)	4, 98, 407, 598, 623, 810, 1140
SseBI	AGGCCT	1 cut(s)	762
SsiI	CCGC	6 cut(s)	34, 72, 143, 177, 379, 798
SspI	AATATT	1 cut(s)	1192
SspMI	CTAG	1 cut(s)	995
StuI	AGGCCT	1 cut(s)	762
StyD4I	CCNGG	4 cut(s)	417, 448, 559, 865
StyI	CCWWGG	2 cut(s)	441, 940
TaaI	ACNGT	4 cut(s)	157, 647, 756, 962
TaiI	ACGT	4 cut(s)	231, 265, 281, 428
TaqI	TCGA	6 cut(s)	234, 405, 411, 1086, 1098, 1173
TasI	AATT	7 cut(s)	4, 98, 407, 598, 623, 810, 1140
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	1 cut(s)	367
Tru1I	TTAA	5 cut(s)	351, 387, 918, 1179, 1188
Tru9I	TTAA	5 cut(s)	351, 387, 918, 1179, 1188
TscAI	CASTG	3 cut(s)	571, 652, 759
TseFI	GTSAC	2 cut(s)	130, 647
TseI	GCWGC	2 cut(s)	587, 1079
Tsp45I	GTSAC	2 cut(s)	130, 647
TspDTI	ATGAA	3 cut(s)	17, 763, 1080
TspGWI	ACGGA	2 cut(s)	712, 990
TspRI	CASTG	3 cut(s)	571, 652, 759
Tth111I	GACNNNGTC	2 cut(s)	302, 401
VpaK11BI	GGWCC	1 cut(s)	120
XapI	RAATTY	1 cut(s)	407
XmiI	GTMKAC	2 cut(s)	63, 1098
XspI	CTAG	1 cut(s)	995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.