Prupe.7G177800_v2.0.a1

Lysine histidine transporter-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0016728
Physical Location & Seq
Reverse (-)
17564902 .. 17568121
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G177800.1

Sequence Viewer

Length: 1626 bp
ATGAGTAGGGAAGCAAATGAGATTAGCTCAGCTCCTATAACACCAAGGCCAGCAACTGTGGCACCAAATCCTTCAGTGGCACCACAGGCACAAGTGTCTTGTCCTCCTTCTCAGTACAACTCACCATCTTTGTCCAGATCACCCCTTCTTGATGGAGCCTCAGACCAGCAACCTGGAGCTGAAGGTGCAGTTGTGGCTAAGGCCCCCAAGACCCCTTTGGCAATTAGAACCCCAAGGATGTCTTTGACCCCAAGGTTCATCACTCCTTTGGGTAGCCCTGTGAGGAAGGCTCTCAAGATGACCAGGCTTGACCCTCAGGATGCTTGGCTTCCCATCACTGAGTCTAGAAATGGCAACAAGTACTATGCTGCTTTTCACACACTGTGTTCTGGGATTGGTATCCAGGCTTTGGTGCTTCCTGTGGCTTTCACAGTTCTTGGATGGGCATGGGGTATAATTCTGTTGACTCTAGGATTCATATGGCAGCTTTACACTCTATGGCTACTGGTTCATCTCCATGAGAATGTAGAAACTGGGATGCGTTACAGCAGATACATGCAACTGTTTAGTCTCACCTATGGTGACAAAATTGCAAATTGGCTAGGCCTGTTCCCAATCATGTATCTGTCTGGTGGAACCTGTGTGGCTCTGATAGTCATTGGTGGATCAACTTCCAAGCTCTTCTACGAAATTGTGTGCCCTACATGCACTTCCAAGCCATTAACAACAGTTGAGTGGTACTTGGTTTTTACATGTGCAGCTGTGGTGCTGTCTCTGCTGCCTAACTTGAACTCCATAGCTGGTGTCTCATTGATTGGTGCTATCACTGCAATTGGGTATTGTACCTTGATTTGGGTGACCTCTGTAGCAGAAGGGAGGCTTCCTGGTGTTTCTTATGATCCTATTAGAGCTGACACTCAGATTGCAAGGGTGTTTGGTGTGCTAAATGCAATTGGGATCATTGCTTTTGCCTTCAGAGGCCACAATCTTATCCTTGAGATTCAGGCCACCATGCCTTCCAGTGAGAAACATCCCTCACATGTGCCAATGTGGAGAGGAGTTAAAGTGTCCTACACACTCATTGCAGTATGCTTGTTTCCCCTTGCAATTGGAGGCTACTGGGCCTATGGTCACTTGATACCAGCAGATGGAGGGATGCTTCCAGCTCTTTACGAATACCATTCAAAAGATGTGTCACAATCCATTTTGGGGCTCACAAGCTTGTTTGTGGTGATAAATGCAGCGTGCTCATTCCAAATCTATGGCATGCCAATGTTTGATGACACAGAGTCAAAATACACTAGCAGAATGAAGAAGCCAGTGCCATGGTGGCTGAGGTGCATTTCTAGGGCCATGTTTGGCTTTGGGGTCTTCTTTTTTGCCGTGGCAATTCCATTTTTGGGAAGTGTGGCTGGTTTGATTGGAGGCATATCACTGCCTGTGACATTCGCATACCCTTGCTTCATGTGGATCAAGATTCACAAGCCTAAGAAGTATAGCCCAATGTGGTGTCTCAATTATTCTCTTGGGGTTTTGGGGATGATTCTGAGTGGCTTCATGATTGCAGCTGGTTTGTATGTTGTCATCGATACTGGTATTAAAGTCCAATTCTTCAAGCCTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

542

Amino Acids

59.12

Weight (kDa)

9.19

Isoelectric Point (pI)

38.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016728)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10770
malus_domestica MD02G1121700.v1.1 MD15G1235300.v1.1
prunus_persica Prupe.7G177800_v2.0.a1
pyrus_communis pycom02g09460 pycom15g20950
rosa_chinensis RchiOBHm_Chr2g0097951
rosa_laevigata RLG00000016745
rosa_multiflora Rmu_sc0009572.1_g000005
rosa_roxburghii Rroxscaffold_2G00144430
rosa_rugosa Rorug02G0069200
rosa_samantha Rh2AG116200 Rh2DG120400
rosa_wichuraiana Rw2G009090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 61, 79
AccB7I CCANNNNNTGG 2 cut(s) 409, 1148
AclWI GGATC 4 cut(s) 673, 893, 965, 1478
AcuI CTGAAG 3 cut(s) 57, 201, 958
AdeI CACNNNGTG 1 cut(s) 384
AfaI GTAC 4 cut(s) 116, 362, 740, 844
AfiI CCNNNNNNNGG 5 cut(s) 409, 852, 1148, 1209, 1400
AflIII ACRYGT 2 cut(s) 752, 1039
AgsI TTSAA 3 cut(s) 790, 1185, 1615
AhdI GACNNNNNGTC 1 cut(s) 1288
AjnI CCWGG 4 cut(s) 172, 302, 402, 883
Alw21I GWGCWC 1 cut(s) 1250
Alw26I GTCTC 4 cut(s) 575, 777, 811, 1517
AlwI GGATC 4 cut(s) 673, 893, 965, 1478
AlwNI CAGNNNCTG 1 cut(s) 56
AoxI GGCC 7 cut(s) 47, 201, 604, 979, 1005, 1122, 1350
ApeKI GCWGC 6 cut(s) 368, 484, 758, 778, 1241, 1565
ArsI GACNNNNNNTTYG 2 cut(s) 1178, 1210
AspS9I GGNCC 3 cut(s) 202, 1122, 1350
AsuHPI GGTGA 6 cut(s) 114, 132, 565, 593, 868, 1243
AxyI CCTNAGG 1 cut(s) 315
BaeGI GKGCMC 1 cut(s) 701
BanI GGYRCC 2 cut(s) 61, 79
BanII GRGCYC 1 cut(s) 1215
BbsI GAAGAC 1 cut(s) 1363
Bbv12I GWGCWC 1 cut(s) 1250
BbvCI CCTCAGC 1 cut(s) 1334
BbvI GCAGC 6 cut(s) 355, 496, 765, 770, 1253, 1577
BccI CCATC 5 cut(s) 133, 146, 341, 435, 1142
BceAI ACGGC 1 cut(s) 1367
BciT130I CCWGG 4 cut(s) 174, 304, 404, 885
BciVI GTATCC 1 cut(s) 410
BcoDI GTCTC 4 cut(s) 575, 777, 811, 1517
BfaI CTAG 5 cut(s) 345, 470, 602, 1302, 1347
BfmI CTRYAG 1 cut(s) 864
BfuI GTATCC 1 cut(s) 410
BglI GCCNNNNNGGC 1 cut(s) 1330
BisI GCNGC 6 cut(s) 369, 485, 759, 779, 1242, 1566
BlpI GCTNAGC 1 cut(s) 28
BlsI GCNGC 6 cut(s) 370, 486, 760, 780, 1243, 1567
BmcAI AGTACT 1 cut(s) 362
Bme1390I CCNGG 4 cut(s) 174, 304, 404, 885
BmeRI GACNNNNNGTC 1 cut(s) 1288
BmgT120I GGNCC 3 cut(s) 202, 1122, 1350
BmiI GGNNCC 5 cut(s) 63, 81, 157, 204, 637
BmrFI CCNGG 4 cut(s) 174, 304, 404, 885
BmrI ACTGGG 2 cut(s) 543, 1129
BmsI GCATC 3 cut(s) 310, 528, 1146
BmuI ACTGGG 2 cut(s) 543, 1129
BpiI GAAGAC 1 cut(s) 1363
BplI GAGNNNNNCTC 4 cut(s) 11, 43, 274, 306
BpmI CTGGAG 1 cut(s) 195
Bpu10I CCTNAGC 2 cut(s) 198, 1334
Bpu1102I GCTNAGC 1 cut(s) 28
BpuEI CTTGAG 2 cut(s) 278, 1016
Bsa29I ATCGAT 1 cut(s) 1587
BsaBI GATNNNNATC 1 cut(s) 398
BsaJI CCNNGG 5 cut(s) 44, 233, 251, 1325, 1383
BsaXI ACNNNNNCTCC 4 cut(s) 776, 806, 1050, 1080
Bsc4I CCNNNNNNNGG 5 cut(s) 409, 852, 1148, 1209, 1400
Bse1I ACTGG 6 cut(s) 510, 538, 1020, 1124, 1319, 1597
Bse21I CCTNAGG 1 cut(s) 315
Bse3DI GCAATG 2 cut(s) 960, 1080
Bse8I GATNNNNATC 1 cut(s) 398
BseBI CCWGG 4 cut(s) 174, 304, 404, 885
BseCI ATCGAT 1 cut(s) 1587
BseDI CCNNGG 5 cut(s) 44, 233, 251, 1325, 1383
BseGI GGATG 7 cut(s) 243, 325, 446, 543, 1030, 1161, 1545
BseJI GATNNNNATC 1 cut(s) 398
BseLI CCNNNNNNNGG 5 cut(s) 409, 852, 1148, 1209, 1400
BseMI GCAATG 2 cut(s) 960, 1080
BseMII CTCAG 8 cut(s) 42, 125, 174, 329, 330, 932, 1325, 1538
BseNI ACTGG 6 cut(s) 510, 538, 1020, 1124, 1319, 1597
BseRI GAGGAG 1 cut(s) 1071
BseSI GKGCMC 1 cut(s) 701
BseXI GCAGC 6 cut(s) 355, 496, 765, 770, 1253, 1577
BsgI GTGCAG 2 cut(s) 207, 777
BshFI GGCC 7 cut(s) 49, 203, 606, 981, 1007, 1124, 1352
BshNI GGYRCC 2 cut(s) 61, 79
BshVI ATCGAT 1 cut(s) 1587
BsiHKAI GWGCWC 1 cut(s) 1250
BslI CCNNNNNNNGG 5 cut(s) 409, 852, 1148, 1209, 1400
BsmAI GTCTC 4 cut(s) 575, 777, 811, 1517
BsnI GGCC 7 cut(s) 49, 203, 606, 981, 1007, 1124, 1352
Bsp1286I GDGCHC 3 cut(s) 701, 1215, 1250
Bsp143I GATC 5 cut(s) 137, 665, 898, 957, 1470
Bsp1720I GCTNAGC 1 cut(s) 28
Bsp19I CCATGG 1 cut(s) 1325
BspANI GGCC 7 cut(s) 49, 203, 606, 981, 1007, 1124, 1352
BspCNI CTCAG 8 cut(s) 41, 124, 173, 328, 331, 931, 1326, 1539
BspDI ATCGAT 1 cut(s) 1587
BspHI TCATGA 1 cut(s) 1557
BspLI GGNNCC 5 cut(s) 63, 81, 157, 204, 637
BspPI GGATC 4 cut(s) 673, 893, 965, 1478
BspQI GCTCTTC 1 cut(s) 686
BspT107I GGYRCC 2 cut(s) 61, 79
BsrDI GCAATG 2 cut(s) 960, 1080
BsrI ACTGG 6 cut(s) 510, 538, 1020, 1124, 1319, 1597
BssECI CCNNGG 5 cut(s) 44, 233, 251, 1325, 1383
BssMI GATC 5 cut(s) 137, 665, 898, 957, 1470
BssT1I CCWWGG 4 cut(s) 44, 233, 251, 1325
Bst2UI CCWGG 4 cut(s) 174, 304, 404, 885
Bst4CI ACNGT 5 cut(s) 58, 384, 433, 564, 730
Bst6I CTCTTC 1 cut(s) 686
BstC8I GCNNGC 3 cut(s) 51, 1246, 1268
BstDSI CCRYGG 2 cut(s) 1325, 1383
BstEII GGTNACC 1 cut(s) 856
BstF5I GGATG 7 cut(s) 243, 325, 446, 543, 1030, 1161, 1545
BstKTI GATC 5 cut(s) 140, 668, 901, 960, 1473
BstMAI GTCTC 4 cut(s) 575, 777, 811, 1517
BstMBI GATC 5 cut(s) 137, 665, 898, 957, 1470
BstMWI GCNNNNNNNGC 8 cut(s) 59, 86, 185, 194, 705, 775, 827, 1330
BstNI CCWGG 4 cut(s) 174, 304, 404, 885
BstNSI RCATGY 5 cut(s) 559, 708, 756, 1043, 1270
BstPI GGTNACC 1 cut(s) 856
BstSCI CCNGG 4 cut(s) 172, 302, 402, 883
BstSFI CTRYAG 1 cut(s) 864
BstSLI GKGCMC 1 cut(s) 701
BstV1I GCAGC 6 cut(s) 355, 496, 765, 770, 1253, 1577
BstV2I GAAGAC 1 cut(s) 1363
BstXI CCANNNNNNTGG 3 cut(s) 173, 1262, 1326
Bsu15I ATCGAT 1 cut(s) 1587
Bsu36I CCTNAGG 1 cut(s) 315
BsuI GTATCC 1 cut(s) 410
BsuRI GGCC 7 cut(s) 49, 203, 606, 981, 1007, 1124, 1352
BsuTUI ATCGAT 1 cut(s) 1587
BtgI CCRYGG 2 cut(s) 1325, 1383
BtsCI GGATG 7 cut(s) 243, 325, 446, 543, 1030, 1161, 1545
BtsI GCAGTG 2 cut(s) 825, 1433
BtsIMutI CAGTG 7 cut(s) 81, 336, 380, 825, 1027, 1326, 1433
Cac8I GCNNGC 3 cut(s) 51, 1246, 1268
CaiI CAGNNNCTG 1 cut(s) 56
CciI TCATGA 1 cut(s) 1557
Cfr13I GGNCC 3 cut(s) 202, 1122, 1350
ClaI ATCGAT 1 cut(s) 1587
Csp6I GTAC 4 cut(s) 115, 361, 739, 843
CviQI GTAC 4 cut(s) 115, 361, 739, 843
DpnI GATC 5 cut(s) 139, 667, 900, 959, 1472
DpnII GATC 5 cut(s) 137, 665, 898, 957, 1470
DraIII CACNNNGTG 1 cut(s) 384
DriI GACNNNNNGTC 1 cut(s) 1288
Eam1104I CTCTTC 1 cut(s) 686
Eam1105I GACNNNNNGTC 1 cut(s) 1288
EarI CTCTTC 1 cut(s) 686
Eco130I CCWWGG 4 cut(s) 44, 233, 251, 1325
Eco147I AGGCCT 1 cut(s) 606
Eco24I GRGCYC 1 cut(s) 1215
Eco57I CTGAAG 3 cut(s) 57, 201, 958
Eco81I CCTNAGG 1 cut(s) 315
Eco91I GGTNACC 1 cut(s) 856
EcoO109I RGGNCCY 1 cut(s) 202
EcoO65I GGTNACC 1 cut(s) 856
EcoRII CCWGG 4 cut(s) 172, 302, 402, 883
EcoT14I CCWWGG 4 cut(s) 44, 233, 251, 1325
EcoT38I GRGCYC 1 cut(s) 1215
ErhI CCWWGG 4 cut(s) 44, 233, 251, 1325
FalI AAGNNNNNCTT 4 cut(s) 226, 258, 864, 896
FauNDI CATATG 1 cut(s) 479
Fnu4HI GCNGC 6 cut(s) 369, 485, 759, 779, 1242, 1566
FokI GGATG 7 cut(s) 250, 332, 453, 550, 1017, 1168, 1552
FriOI GRGCYC 1 cut(s) 1215
Fsp4HI GCNGC 6 cut(s) 369, 485, 759, 779, 1242, 1566
FspBI CTAG 5 cut(s) 345, 470, 602, 1302, 1347
GluI GCNGC 6 cut(s) 369, 485, 759, 779, 1242, 1566
GsuI CTGGAG 1 cut(s) 195
HaeIII GGCC 7 cut(s) 49, 203, 606, 981, 1007, 1124, 1352
HincII GTYRAC 1 cut(s) 465
HindII GTYRAC 1 cut(s) 465
HindIII AAGCTT 1 cut(s) 1219
HinfI GANTC 7 cut(s) 341, 466, 474, 1000, 1289, 1477, 1543
HphI GGTGA 6 cut(s) 114, 132, 565, 593, 868, 1243
Hpy166II GTNNAC 1 cut(s) 465
Hpy188I TCNGA 5 cut(s) 163, 651, 921, 977, 1548
Hpy188III TCNNGA 7 cut(s) 135, 149, 295, 317, 345, 1474, 1558
Hpy8I GTNNAC 1 cut(s) 465
HpyAV CCTTC 8 cut(s) 81, 117, 155, 176, 280, 866, 982, 1026
HpyCH4III ACNGT 5 cut(s) 58, 384, 433, 564, 730
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 86, 185, 194, 705, 775, 827, 1330
Kzo9I GATC 5 cut(s) 137, 665, 898, 957, 1470
LguI GCTCTTC 1 cut(s) 686
LmnI GCTCC 3 cut(s) 37, 155, 176
Lsp1109I GCAGC 6 cut(s) 355, 496, 765, 770, 1253, 1577
LweI GCATC 3 cut(s) 310, 528, 1146
MaeI CTAG 5 cut(s) 345, 470, 602, 1302, 1347
MaeIII GTNAC 6 cut(s) 542, 581, 856, 1130, 1194, 1441
MalI GATC 5 cut(s) 139, 667, 900, 959, 1472
MboI GATC 5 cut(s) 137, 665, 898, 957, 1470
MboII GAAGA 4 cut(s) 673, 1324, 1363, 1603
MfeI CAATTG 3 cut(s) 831, 951, 1107
MhlI GDGCHC 3 cut(s) 701, 1215, 1250
MlyI GAGTC 3 cut(s) 350, 460, 1298
MseI TTAA 3 cut(s) 722, 1062, 1599
MslI CAYNNNNRTG 3 cut(s) 516, 522, 1271
MspA1I CMGCKG 2 cut(s) 761, 1568
MspR9I CCNGG 4 cut(s) 174, 304, 404, 885
MunI CAATTG 3 cut(s) 831, 951, 1107
MvaI CCWGG 4 cut(s) 174, 304, 404, 885
MwoI GCNNNNNNNGC 8 cut(s) 59, 86, 185, 194, 705, 775, 827, 1330
NcoI CCATGG 1 cut(s) 1325
NdeI CATATG 1 cut(s) 479
NdeII GATC 5 cut(s) 137, 665, 898, 957, 1470
NlaIV GGNNCC 5 cut(s) 63, 81, 157, 204, 637
NmuCI GTSAC 5 cut(s) 581, 856, 1130, 1194, 1441
NspI RCATGY 5 cut(s) 559, 708, 756, 1043, 1270
PaeI GCATGC 1 cut(s) 1270
PagI TCATGA 1 cut(s) 1557
PceI AGGCCT 1 cut(s) 606
PciI ACATGT 2 cut(s) 752, 1039
PciSI GCTCTTC 1 cut(s) 686
PfeI GAWTC 4 cut(s) 474, 1000, 1477, 1543
PflMI CCANNNNNTGG 2 cut(s) 409, 1148
PkrI GCNGC 6 cut(s) 370, 486, 760, 780, 1243, 1567
PleI GAGTC 3 cut(s) 349, 460, 1297
PpsI GAGTC 3 cut(s) 349, 460, 1297
PscI ACATGT 2 cut(s) 752, 1039
Psp6I CCWGG 4 cut(s) 172, 302, 402, 883
PspEI GGTNACC 1 cut(s) 856
PspGI CCWGG 4 cut(s) 172, 302, 402, 883
PspN4I GGNNCC 5 cut(s) 63, 81, 157, 204, 637
PspPI GGNCC 3 cut(s) 202, 1122, 1350
PstNI CAGNNNCTG 1 cut(s) 56
PvuII CAGCTG 2 cut(s) 761, 1568
RsaI GTAC 4 cut(s) 116, 362, 740, 844
RsaNI GTAC 4 cut(s) 115, 361, 739, 843
RseI CAYNNNNRTG 3 cut(s) 516, 522, 1271
SapI GCTCTTC 1 cut(s) 686
SaqAI TTAA 3 cut(s) 722, 1062, 1599
SatI GCNGC 6 cut(s) 369, 485, 759, 779, 1242, 1566
Sau3AI GATC 5 cut(s) 137, 665, 898, 957, 1470
Sau96I GGNCC 3 cut(s) 202, 1122, 1350
ScaI AGTACT 1 cut(s) 362
SchI GAGTC 3 cut(s) 350, 460, 1298
ScrFI CCNGG 4 cut(s) 174, 304, 404, 885
SduI GDGCHC 3 cut(s) 701, 1215, 1250
SfaNI GCATC 3 cut(s) 310, 528, 1146
SfcI CTRYAG 1 cut(s) 864
SmiMI CAYNNNNRTG 3 cut(s) 516, 522, 1271
SmlI CTYRAG 2 cut(s) 293, 995
SmoI CTYRAG 2 cut(s) 293, 995
SphI GCATGC 1 cut(s) 1270
SseBI AGGCCT 1 cut(s) 606
SspMI CTAG 5 cut(s) 345, 470, 602, 1302, 1347
StuI AGGCCT 1 cut(s) 606
StyD4I CCNGG 4 cut(s) 172, 302, 402, 883
StyI CCWWGG 4 cut(s) 44, 233, 251, 1325
TaaI ACNGT 5 cut(s) 58, 384, 433, 564, 730
TaqI TCGA 1 cut(s) 1587
TatI WGTACW 2 cut(s) 114, 360
TfiI GAWTC 4 cut(s) 474, 1000, 1477, 1543
Tru1I TTAA 3 cut(s) 722, 1062, 1599
Tru9I TTAA 3 cut(s) 722, 1062, 1599
TscAI CASTG 7 cut(s) 81, 343, 387, 832, 1027, 1326, 1440
TseFI GTSAC 5 cut(s) 581, 856, 1130, 1194, 1441
TseI GCWGC 6 cut(s) 368, 484, 758, 778, 1241, 1565
Tsp45I GTSAC 5 cut(s) 581, 856, 1130, 1194, 1441
TspDTI ATGAA 6 cut(s) 247, 466, 500, 1325, 1453, 1546
TspRI CASTG 7 cut(s) 81, 343, 387, 832, 1027, 1326, 1440
Van91I CCANNNNNTGG 2 cut(s) 409, 1148
XbaI TCTAGA 1 cut(s) 344
XceI RCATGY 5 cut(s) 559, 708, 756, 1043, 1270
XcmI CCANNNNNNNNNTGG 2 cut(s) 214, 1326
XspI CTAG 5 cut(s) 345, 470, 602, 1302, 1347
ZrmI AGTACT 1 cut(s) 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.