Rw2G009090

Lysine histidine transporter-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0016728
Physical Location & Seq
Forward (+)
9122405 .. 9125441
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G009090.1

Sequence Viewer

Length: 1725 bp
ATGAGTAACGAAGCAAATGAGATCAGTTCAGCTCCAATAACACCTCGGCCGGTGGCTCCTAAGCCTCCGGTGGCGTCTCAACAACAGCCGCCAGTGTCTTGTCCACCTTCCCAGTACAACTCTCCTTCTCTCTCCCGGTCACCGCTGCTCGAAGCTGCGGTGCCGGCTGCCAACCACCATGGAGGAGAAGAAGGCGAAGGCGCCGGTGCAATAGTTCCGAGCAAGACCCCGAAGGGAGCTAGAACTCCACTGGGGATAAGAACCCCGAGGATGTCTTTGACTCCGAGGTTCCTCACTCCATTGGGTAGCCCGGTAAGGAAGGCCCTCAGGGCTACAAGGCTTGACCCTGAGGATGCCTGGCTACCCATCACCGAGTCCAGAAATGGCAACAAGTACTACGCTGCGTTTCACACTCTCTGCTCCGGTATTGGTATCCAAGCTTTGGTGCTTCCGGTGGCCTTCACTATCCTCGGCTGGACATGGGGAATAATCTGTTTGACCATAGCATTCATATGGCAACTCTACACCCTCTATCTCCTTGTTCATCTCCACGAAAACATCGAAACTGGAGTCCGGTACAGCAGGTACATGCAACTCTTCAGTTTCACGTTCGGCGATCGAATCGCAAATCTGCTAGGGCTATTCCCTATCATGTACCTCTCCGGCGGTACCTGTGTGGCCTTAATCGTCATTGGTGGATCGACCTCGAAACTCTTCTTCCAGACCGTCTGTGGGGCAACCTGCACTGCCAAGCCATTGACGCCCGTTGAATGGTACTTGGTGTTTACGTGTTGCGCTGTGATGTTTTCCCTGTTGCCTAACTTGAACTCCATTGCTGGGGTTTCTTTGATTGGTGCAATCACTGCTGTTGGGTACTGTACCCTGATGTGGGTGGTATCTATAACTGAGGGTAGGCTTCCCGGTGTATCCTATGATCCCATTAGGGCAGGGACCAAAGTTGCAAGAGTGTTTGATGTGTTGAATGCCCTTGGAATCATCGCTTTCGCATTCAGAGGCCACAATCTTATCCTTGAGATTCAGGCCACCATGCCTTCTAGTGAGAAACATCCCTCACGTGTGCCAATGTGGAGAGGTGTCAAGGTGTCTTACACACTCATTGCTGCTTGCTTATACCCCATTGCCATTGGTGGCTACTGGGCCTATGGTCACTTGATTCCGAAAGAAGGAGGAATGCTCGCTGCCATTTACGGGTTCCATTCAAAAGATGTGTCGCAGTTCATTTTGGGACTAATGAGCTTGTTCGTGGTTGTAAACGCCGTGAGCTCATTCCAAATCTACGGGATGCCCATGTTTGACCACATGGAGTCGAAATACACTAGCCGAAAGAAGCAGCCATTGCCGTGGTGGCTTAGGTGCATTGGGAGAGCCATGTTCGGATTCGGGTGCTTCTTCATGGCTGTGGCAATCCCATTCTTGGGAAGTGTTGCCGGATTGATTGGAGGAATCGCATTGCCGGTGACATTGGTGTACCCATGTTGGATGTGGCTCAAGATCAAGAAGCCGAAGAAGTACGGCGTAAGTTGGTGGGTCAACTGGGTTCTTGGGGTCTTGGGAATGGGTCTCACTGGGCTTCTGATTGCAGCTGGACTCTATGTTGTTATTGACACTGGTATAAAGTCAGTTTCTTCAAGCCTCACTAATAAGGCAACAAAACAGAATGAAATATATGGGGGTCAAGTTGCTCTTATTAATTCGTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

574

Amino Acids

62.38

Weight (kDa)

9.38

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 132 - 540 4.1e-58 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016728)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10770
malus_domestica MD02G1121700.v1.1 MD15G1235300.v1.1
prunus_persica Prupe.7G177800_v2.0.a1
pyrus_communis pycom02g09460 pycom15g20950
rosa_chinensis RchiOBHm_Chr2g0097951
rosa_laevigata RLG00000016745
rosa_multiflora Rmu_sc0009572.1_g000005
rosa_roxburghii Rroxscaffold_2G00144430
rosa_rugosa Rorug02G0069200
rosa_samantha Rh2AG116200 Rh2DG120400
rosa_wichuraiana Rw2G009090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 573, 749
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 3 cut(s) 160, 200, 668
AccB7I CCANNNNNTGG 1 cut(s) 442
AciI CCGC 4 cut(s) 89, 143, 158, 666
AclWI GGATC 2 cut(s) 706, 929
AcoI YGGCCR 1 cut(s) 47
AcuI CTGAAG 1 cut(s) 583
AcvI CACGTG 1 cut(s) 1076
AcyI GRCGYC 3 cut(s) 74, 201, 761
AflIII ACRYGT 2 cut(s) 788, 1075
AgsI TTSAA 5 cut(s) 770, 826, 982, 1221, 1650
AjnI CCWGG 1 cut(s) 356
AluBI AGCT 7 cut(s) 32, 155, 239, 440, 1257, 1284, 1604
AluI AGCT 7 cut(s) 32, 155, 239, 440, 1257, 1284, 1604
Alw21I GWGCWC 1 cut(s) 1286
Alw26I GTCTC 2 cut(s) 81, 1586
AlwI GGATC 2 cut(s) 706, 929
Ama87I CYCGRG 1 cut(s) 265
AoxI GGCC 7 cut(s) 47, 321, 456, 678, 1015, 1041, 1158
ApeKI GCWGC 8 cut(s) 145, 155, 167, 401, 1121, 1199, 1351, 1601
ArsI GACNNNNNNTTYG 4 cut(s) 555, 587, 1214, 1246
AseI ATTAAT 1 cut(s) 1710
Asp700I GAANNNNTTC 1 cut(s) 713
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 2 cut(s) 203, 797
AspS9I GGNCC 3 cut(s) 322, 951, 1158
AsuC2I CCSGG 3 cut(s) 136, 311, 921
AsuHPI GGTGA 3 cut(s) 132, 361, 1489
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 1 cut(s) 951
AxyI CCTNAGG 2 cut(s) 326, 348
BaeI ACNNNNGTAYC 2 cut(s) 660, 693
BanI GGYRCC 3 cut(s) 160, 200, 668
BanII GRGCYC 1 cut(s) 1286
BbrPI CACGTG 1 cut(s) 1076
Bbv12I GWGCWC 1 cut(s) 1286
BbvI GCAGC 8 cut(s) 132, 142, 154, 388, 1108, 1186, 1363, 1613
BccI CCATC 1 cut(s) 374
BceAI ACGGC 3 cut(s) 1262, 1345, 1549
BciT130I CCWGG 1 cut(s) 358
BciVI GTATCC 2 cut(s) 443, 937
BcnI CCSGG 3 cut(s) 136, 311, 921
BcoDI GTCTC 2 cut(s) 81, 1586
BfaI CTAG 4 cut(s) 240, 635, 1056, 1338
BfoI RGCGCY 1 cut(s) 204
BfuAI ACCTGC 2 cut(s) 573, 749
BfuI GTATCC 2 cut(s) 443, 937
BglI GCCNNNNNGGC 2 cut(s) 329, 1366
BisI GCNGC 9 cut(s) 89, 146, 156, 168, 402, 1122, 1200, 1352, 1602
BlsI GCNGC 9 cut(s) 90, 147, 157, 169, 403, 1123, 1201, 1353, 1603
BmcAI AGTACT 1 cut(s) 395
Bme1390I CCNGG 4 cut(s) 136, 311, 358, 921
Bme18I GGWCC 1 cut(s) 951
BmeT110I CYCGRG 1 cut(s) 265
BmgT120I GGNCC 3 cut(s) 322, 951, 1158
BmiI GGNNCC 7 cut(s) 57, 162, 202, 290, 670, 952, 1214
BmrFI CCNGG 4 cut(s) 136, 311, 358, 921
BmrI ACTGGG 5 cut(s) 106, 260, 1165, 1564, 1596
BmsI GCATC 2 cut(s) 343, 1293
BmuI ACTGGG 5 cut(s) 106, 260, 1165, 1564, 1596
BplI GAGNNNNNCTC 2 cut(s) 1179, 1211
BpmI CTGGAG 1 cut(s) 588
Bpu10I CCTNAGC 2 cut(s) 60, 1370
BpuEI CTTGAG 2 cut(s) 1052, 1493
BpuMI CCSGG 3 cut(s) 136, 311, 921
BsaAI YACGTR 2 cut(s) 789, 1076
BsaHI GRCGYC 3 cut(s) 74, 201, 761
BsaI GGTCTC 1 cut(s) 1586
BsaJI CCNNGG 7 cut(s) 44, 178, 266, 284, 469, 988, 1361
BsaWI WCCGGW 4 cut(s) 67, 422, 451, 573
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bse118I RCCGGY 4 cut(s) 49, 163, 203, 1474
Bse1I ACTGG 8 cut(s) 92, 112, 255, 571, 1160, 1559, 1591, 1633
Bse21I CCTNAGG 2 cut(s) 326, 348
Bse3DI GCAATG 5 cut(s) 831, 1116, 1137, 1355, 1469
BseBI CCWGG 1 cut(s) 358
BseDI CCNNGG 7 cut(s) 44, 178, 266, 284, 469, 988, 1361
BseGI GGATG 5 cut(s) 276, 358, 1066, 1308, 1506
BseMI GCAATG 5 cut(s) 831, 1116, 1137, 1355, 1469
BseMII CTCAG 3 cut(s) 339, 340, 897
BseNI ACTGG 8 cut(s) 92, 112, 255, 571, 1160, 1559, 1591, 1633
BseRI GAGGAG 1 cut(s) 198
BseX3I CGGCCG 1 cut(s) 47
BseXI GCAGC 8 cut(s) 132, 142, 154, 388, 1108, 1186, 1363, 1613
BseYI CCCAGC 1 cut(s) 836
BsgI GTGCAG 1 cut(s) 727
Bsh1285I CGRYCG 2 cut(s) 50, 619
BshFI GGCC 7 cut(s) 49, 323, 458, 680, 1017, 1043, 1160
BshNI GGYRCC 3 cut(s) 160, 200, 668
BsiEI CGRYCG 2 cut(s) 50, 619
BsiHKAI GWGCWC 1 cut(s) 1286
BsiHKCI CYCGRG 1 cut(s) 265
BslFI GGGAC 2 cut(s) 964, 1260
BsmAI GTCTC 2 cut(s) 81, 1586
BsmBI CGTCTC 1 cut(s) 81
BsmFI GGGAC 2 cut(s) 964, 1260
BsmI GAATGC 4 cut(s) 506, 988, 1007, 1197
BsnI GGCC 7 cut(s) 49, 323, 458, 680, 1017, 1043, 1160
Bso31I GGTCTC 1 cut(s) 1586
BsoBI CYCGRG 1 cut(s) 265
Bsp1286I GDGCHC 1 cut(s) 1286
Bsp143I GATC 5 cut(s) 21, 616, 698, 934, 1512
Bsp19I CCATGG 1 cut(s) 178
BspACI CCGC 4 cut(s) 89, 143, 158, 666
BspANI GGCC 7 cut(s) 49, 323, 458, 680, 1017, 1043, 1160
BspCNI CTCAG 3 cut(s) 339, 340, 898
BspLI GGNNCC 7 cut(s) 57, 162, 202, 290, 670, 952, 1214
BspMI ACCTGC 2 cut(s) 573, 749
BspPI GGATC 2 cut(s) 706, 929
BspT107I GGYRCC 3 cut(s) 160, 200, 668
BspTNI GGTCTC 1 cut(s) 1586
BsrDI GCAATG 5 cut(s) 831, 1116, 1137, 1355, 1469
BsrFI RCCGGY 4 cut(s) 49, 163, 203, 1474
BsrI ACTGG 8 cut(s) 92, 112, 255, 571, 1160, 1559, 1591, 1633
BssAI RCCGGY 4 cut(s) 49, 163, 203, 1474
BssECI CCNNGG 7 cut(s) 44, 178, 266, 284, 469, 988, 1361
BssMI GATC 5 cut(s) 21, 616, 698, 934, 1512
BssNI GRCGYC 3 cut(s) 74, 201, 761
BssT1I CCWWGG 2 cut(s) 178, 988
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 2 cut(s) 727, 878
Bst6I CTCTTC 2 cut(s) 602, 719
BstACI GRCGYC 3 cut(s) 74, 201, 761
BstAPI GCANNNNNTGC 2 cut(s) 863, 1357
BstBAI YACGTR 2 cut(s) 789, 1076
BstC8I GCNNGC 3 cut(s) 165, 1126, 1197
BstDEI CTNAG 5 cut(s) 60, 326, 348, 906, 1370
BstDSI CCRYGG 2 cut(s) 178, 1361
BstEII GGTNACC 1 cut(s) 138
BstF5I GGATG 5 cut(s) 276, 358, 1066, 1308, 1506
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 2 cut(s) 203, 797
BstKTI GATC 5 cut(s) 24, 619, 701, 937, 1515
BstMAI GTCTC 2 cut(s) 81, 1586
BstMBI GATC 5 cut(s) 21, 616, 698, 934, 1512
BstMCI CGRYCG 2 cut(s) 50, 619
BstMWI GCNNNNNNNGC 6 cut(s) 164, 329, 760, 863, 1357, 1366
BstNI CCWGG 1 cut(s) 358
BstNSI RCATGY 1 cut(s) 592
BstPI GGTNACC 1 cut(s) 138
BstSCI CCNGG 4 cut(s) 134, 309, 356, 919
BstV1I GCAGC 8 cut(s) 132, 142, 154, 388, 1108, 1186, 1363, 1613
BstXI CCANNNNNNTGG 1 cut(s) 1362
BstZI CGGCCG 1 cut(s) 47
Bsu36I CCTNAGG 2 cut(s) 326, 348
BsuI GTATCC 2 cut(s) 443, 937
BsuRI GGCC 7 cut(s) 49, 323, 458, 680, 1017, 1043, 1160
BtgI CCRYGG 2 cut(s) 178, 1361
BtgZI GCGATG 1 cut(s) 982
BtsCI GGATG 5 cut(s) 276, 358, 1066, 1308, 1506
BtsI GCAGTG 2 cut(s) 744, 861
BtsIMutI CAGTG 6 cut(s) 99, 248, 744, 861, 1584, 1626
BveI ACCTGC 2 cut(s) 573, 749
Cac8I GCNNGC 3 cut(s) 165, 1126, 1197
CfoI GCGC 2 cut(s) 203, 797
Cfr10I RCCGGY 4 cut(s) 49, 163, 203, 1474
Cfr13I GGNCC 3 cut(s) 322, 951, 1158
CseI GACGC 2 cut(s) 63, 769
DdeI CTNAG 5 cut(s) 60, 326, 348, 906, 1370
DinI GGCGCC 1 cut(s) 202
DpnI GATC 5 cut(s) 23, 618, 700, 936, 1514
DpnII GATC 5 cut(s) 21, 616, 698, 934, 1512
EaeI YGGCCR 1 cut(s) 47
EagI CGGCCG 1 cut(s) 47
Eam1104I CTCTTC 2 cut(s) 602, 719
EarI CTCTTC 2 cut(s) 602, 719
Ecl136II GAGCTC 1 cut(s) 1284
EclXI CGGCCG 1 cut(s) 47
Eco130I CCWWGG 2 cut(s) 178, 988
Eco24I GRGCYC 1 cut(s) 1286
Eco31I GGTCTC 1 cut(s) 1586
Eco47I GGWCC 1 cut(s) 951
Eco52I CGGCCG 1 cut(s) 47
Eco53kI GAGCTC 1 cut(s) 1284
Eco57I CTGAAG 1 cut(s) 583
Eco72I CACGTG 1 cut(s) 1076
Eco81I CCTNAGG 2 cut(s) 326, 348
Eco88I CYCGRG 1 cut(s) 265
Eco91I GGTNACC 1 cut(s) 138
EcoICRI GAGCTC 1 cut(s) 1284
EcoO109I RGGNCCY 1 cut(s) 322
EcoO65I GGTNACC 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 356
EcoT14I CCWWGG 2 cut(s) 178, 988
EcoT38I GRGCYC 1 cut(s) 1286
EgeI GGCGCC 1 cut(s) 202
EheI GGCGCC 1 cut(s) 202
ErhI CCWWGG 2 cut(s) 178, 988
Esp3I CGTCTC 1 cut(s) 81
FalI AAGNNNNNCTT 2 cut(s) 1689, 1721
FaqI GGGAC 2 cut(s) 964, 1260
FauNDI CATATG 1 cut(s) 512
Fnu4HI GCNGC 9 cut(s) 89, 146, 156, 168, 402, 1122, 1200, 1352, 1602
FokI GGATG 5 cut(s) 283, 365, 1053, 1315, 1513
FriOI GRGCYC 1 cut(s) 1286
Fsp4HI GCNGC 9 cut(s) 89, 146, 156, 168, 402, 1122, 1200, 1352, 1602
FspBI CTAG 4 cut(s) 240, 635, 1056, 1338
GlaI GCGC 2 cut(s) 202, 796
GluI GCNGC 9 cut(s) 89, 146, 156, 168, 402, 1122, 1200, 1352, 1602
GsaI CCCAGC 1 cut(s) 840
GsuI CTGGAG 1 cut(s) 588
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 7 cut(s) 49, 323, 458, 680, 1017, 1043, 1160
HgaI GACGC 2 cut(s) 63, 769
HhaI GCGC 2 cut(s) 203, 797
Hin1I GRCGYC 3 cut(s) 74, 201, 761
Hin6I GCGC 2 cut(s) 201, 795
HinP1I GCGC 2 cut(s) 201, 795
HincII GTYRAC 1 cut(s) 1552
HindII GTYRAC 1 cut(s) 1552
HindIII AAGCTT 1 cut(s) 438
HphI GGTGA 3 cut(s) 132, 361, 1489
Hpy166II GTNNAC 5 cut(s) 104, 786, 1273, 1489, 1552
Hpy188I TCNGA 6 cut(s) 219, 285, 1013, 1179, 1397, 1596
Hpy188III TCNNGA 4 cut(s) 378, 721, 1510, 1516
Hpy8I GTNNAC 5 cut(s) 104, 786, 1273, 1489, 1552
HpyAV CCTTC 9 cut(s) 117, 135, 185, 191, 226, 313, 469, 1062, 1178
HpyCH4III ACNGT 2 cut(s) 727, 878
HpyCH4IV ACGT 3 cut(s) 608, 788, 1075
HpyCH4V TGCA 7 cut(s) 209, 592, 744, 857, 962, 1377, 1601
HpyF10VI GCNNNNNNNGC 6 cut(s) 164, 329, 760, 863, 1357, 1366
HpyF3I CTNAG 5 cut(s) 60, 326, 348, 906, 1370
HpySE526I ACGT 3 cut(s) 608, 788, 1075
Hsp92I GRCGYC 3 cut(s) 74, 201, 761
HspAI GCGC 2 cut(s) 201, 795
KasI GGCGCC 1 cut(s) 200
KpnI GGTACC 1 cut(s) 672
KroI GCCGGC 1 cut(s) 163
KroNI GCCGGC 1 cut(s) 165
Kzo9I GATC 5 cut(s) 21, 616, 698, 934, 1512
LmnI GCTCC 4 cut(s) 37, 61, 236, 425
Lsp1109I GCAGC 8 cut(s) 132, 142, 154, 388, 1108, 1186, 1363, 1613
LweI GCATC 2 cut(s) 343, 1293
MaeI CTAG 4 cut(s) 240, 635, 1056, 1338
MaeII ACGT 3 cut(s) 608, 788, 1075
MaeIII GTNAC 4 cut(s) 5, 138, 1166, 1477
MalI GATC 5 cut(s) 23, 618, 700, 936, 1514
MboI GATC 5 cut(s) 21, 616, 698, 934, 1512
MboII GAAGA 7 cut(s) 200, 589, 706, 709, 1402, 1537, 1638
MhlI GDGCHC 1 cut(s) 1286
MluCI AATT 1 cut(s) 1711
Mly113I GGCGCC 1 cut(s) 201
MlyI GAGTC 5 cut(s) 274, 383, 579, 1334, 1602
MmeI TCCRAC 1 cut(s) 1478
MroNI GCCGGC 1 cut(s) 163
MroXI GAANNNNTTC 1 cut(s) 713
MseI TTAA 2 cut(s) 683, 1710
MslI CAYNNNNRTG 3 cut(s) 511, 1360, 1418
MspA1I CMGCKG 2 cut(s) 145, 1604
MspR9I CCNGG 4 cut(s) 136, 311, 358, 921
Mva1269I GAATGC 4 cut(s) 506, 988, 1007, 1197
MvaI CCWGG 1 cut(s) 358
MwoI GCNNNNNNNGC 6 cut(s) 164, 329, 760, 863, 1357, 1366
NaeI GCCGGC 1 cut(s) 165
NarI GGCGCC 1 cut(s) 201
NciI CCSGG 3 cut(s) 136, 311, 921
NcoI CCATGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 512
NdeII GATC 5 cut(s) 21, 616, 698, 934, 1512
NgoMIV GCCGGC 1 cut(s) 163
NlaIV GGNNCC 7 cut(s) 57, 162, 202, 290, 670, 952, 1214
NmeAIII GCCGAG 2 cut(s) 25, 450
NmuCI GTSAC 3 cut(s) 138, 1166, 1477
NspI RCATGY 1 cut(s) 592
PcsI WCGNNNNNNNCGW 1 cut(s) 558
PctI GAATGC 4 cut(s) 506, 988, 1007, 1197
PdiI GCCGGC 1 cut(s) 165
PdmI GAANNNNTTC 1 cut(s) 713
PfeI GAWTC 6 cut(s) 621, 993, 1036, 1174, 1398, 1464
PflMI CCANNNNNTGG 1 cut(s) 442
PkrI GCNGC 9 cut(s) 90, 147, 157, 169, 403, 1123, 1201, 1353, 1603
Ple19I CGATCG 1 cut(s) 619
PleI GAGTC 5 cut(s) 274, 382, 578, 1333, 1602
PluTI GGCGCC 1 cut(s) 204
PmaCI CACGTG 1 cut(s) 1076
PmlI CACGTG 1 cut(s) 1076
PpsI GAGTC 5 cut(s) 274, 382, 578, 1333, 1602
Ppu21I YACGTR 2 cut(s) 789, 1076
PshBI ATTAAT 1 cut(s) 1710
Psp124BI GAGCTC 1 cut(s) 1286
Psp6I CCWGG 1 cut(s) 356
PspCI CACGTG 1 cut(s) 1076
PspEI GGTNACC 1 cut(s) 138
PspFI CCCAGC 1 cut(s) 836
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 7 cut(s) 57, 162, 202, 290, 670, 952, 1214
PspPI GGNCC 3 cut(s) 322, 951, 1158
PvuI CGATCG 1 cut(s) 619
PvuII CAGCTG 1 cut(s) 1604
RseI CAYNNNNRTG 3 cut(s) 511, 1360, 1418
SacI GAGCTC 1 cut(s) 1286
SaqAI TTAA 2 cut(s) 683, 1710
SatI GCNGC 9 cut(s) 89, 146, 156, 168, 402, 1122, 1200, 1352, 1602
Sau3AI GATC 5 cut(s) 21, 616, 698, 934, 1512
Sau96I GGNCC 3 cut(s) 322, 951, 1158
ScaI AGTACT 1 cut(s) 395
SchI GAGTC 5 cut(s) 274, 383, 579, 1334, 1602
ScrFI CCNGG 4 cut(s) 136, 311, 358, 921
SduI GDGCHC 1 cut(s) 1286
SfaNI GCATC 2 cut(s) 343, 1293
SfoI GGCGCC 1 cut(s) 202
SgrAI CRCCGGYG 1 cut(s) 203
SinI GGWCC 1 cut(s) 951
SmiMI CAYNNNNRTG 3 cut(s) 511, 1360, 1418
SmlI CTYRAG 2 cut(s) 1031, 1508
SmoI CTYRAG 2 cut(s) 1031, 1508
Sse9I AATT 1 cut(s) 1711
SsiI CCGC 4 cut(s) 89, 143, 158, 666
SspDI GGCGCC 1 cut(s) 200
SspMI CTAG 4 cut(s) 240, 635, 1056, 1338
SstI GAGCTC 1 cut(s) 1286
StyD4I CCNGG 4 cut(s) 134, 309, 356, 919
StyI CCWWGG 2 cut(s) 178, 988
TaaI ACNGT 2 cut(s) 727, 878
TaiI ACGT 3 cut(s) 611, 791, 1078
TaqI TCGA 6 cut(s) 150, 561, 619, 701, 707, 1328
TasI AATT 1 cut(s) 1711
TatI WGTACW 2 cut(s) 114, 393
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 6 cut(s) 621, 993, 1036, 1174, 1398, 1464
Tru1I TTAA 2 cut(s) 683, 1710
Tru9I TTAA 2 cut(s) 683, 1710
TscAI CASTG 6 cut(s) 99, 255, 751, 868, 1591, 1633
TseFI GTSAC 3 cut(s) 138, 1166, 1477
TseI GCWGC 8 cut(s) 145, 155, 167, 401, 1121, 1199, 1351, 1601
Tsp45I GTSAC 3 cut(s) 138, 1166, 1477
TspDTI ATGAA 5 cut(s) 499, 533, 1228, 1402, 1695
TspRI CASTG 6 cut(s) 99, 255, 751, 868, 1591, 1633
Van91I CCANNNNNTGG 1 cut(s) 442
VpaK11BI GGWCC 1 cut(s) 951
VspI ATTAAT 1 cut(s) 1710
XceI RCATGY 1 cut(s) 592
XcmI CCANNNNNNNNNTGG 3 cut(s) 728, 1362, 1500
XmnI GAANNNNTTC 1 cut(s) 713
XspI CTAG 4 cut(s) 240, 635, 1056, 1338
ZrmI AGTACT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.