Chloroplastic group IIA intron splicing facilitator CRS1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G29750 AT4G29750 |
| fragaria_vesca | FvH4_1g07640 FvH4_1g07640 FvH4_1g07640 FvH4_1g07640 |
| malus_domestica | MD15G1208500.v1.1 |
| prunus_persica | Prupe.7G208300_v2.0.a1 Prupe.7G208300_v2.0.a1 |
| pyrus_communis | pycom15g18460 |
| rosa_chinensis | RchiOBHm_Chr2g0093501 |
| rosa_laevigata | RLG00000016412 |
| rosa_multiflora | Rmu_sc0004423.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00148030 |
| rosa_rugosa | Rorug02G0036900 |
| rosa_samantha | Rh2AG083300 Rh2BG084000 Rh2CG086200 Rh2DG082100 |
| rosa_wichuraiana | Rw2G006410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 2006 |
| AccB1I | GGYRCC | 2 cut(s) | 350, 2006 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1722 |
| AccII | CGCG | 2 cut(s) | 2099, 2274 |
| AccIII | TCCGGA | 1 cut(s) | 673 |
| AciI | CCGC | 3 cut(s) | 659, 688, 1080 |
| AclWI | GGATC | 3 cut(s) | 684, 2393, 2515 |
| AcsI | RAATTY | 3 cut(s) | 26, 855, 2221 |
| AcuI | CTGAAG | 1 cut(s) | 1231 |
| AfaI | GTAC | 7 cut(s) | 57, 156, 948, 1326, 1437, 1492, 2008 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1722 |
| AflIII | ACRYGT | 2 cut(s) | 157, 1445 |
| AhlI | ACTAGT | 1 cut(s) | 52 |
| AjnI | CCWGG | 1 cut(s) | 32 |
| AleI | CACNNNNGTG | 1 cut(s) | 288 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1312, 1344 |
| AluBI | AGCT | 4 cut(s) | 372, 1390, 1664, 1840 |
| AluI | AGCT | 4 cut(s) | 372, 1390, 1664, 1840 |
| Alw21I | GWGCWC | 1 cut(s) | 295 |
| Alw26I | GTCTC | 5 cut(s) | 15, 1076, 1278, 1961, 2263 |
| Alw44I | GTGCAC | 1 cut(s) | 291 |
| AlwI | GGATC | 3 cut(s) | 684, 2393, 2515 |
| Ama87I | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| Aor13HI | TCCGGA | 1 cut(s) | 673 |
| AoxI | GGCC | 4 cut(s) | 1180, 1632, 1672, 2213 |
| ApaLI | GTGCAC | 1 cut(s) | 291 |
| ApeKI | GCWGC | 1 cut(s) | 1709 |
| ApoI | RAATTY | 3 cut(s) | 26, 855, 2221 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1768, 1970 |
| Asp718I | GGTACC | 1 cut(s) | 2006 |
| AspA2I | CCTAGG | 1 cut(s) | 2216 |
| AspS9I | GGNCC | 2 cut(s) | 846, 1157 |
| AsuHPI | GGTGA | 4 cut(s) | 536, 632, 775, 2062 |
| AsuII | TTCGAA | 1 cut(s) | 452 |
| AvaI | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| AvaII | GGWCC | 2 cut(s) | 846, 1157 |
| AvrII | CCTAGG | 1 cut(s) | 2216 |
| BaeGI | GKGCMC | 1 cut(s) | 295 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1990, 2023 |
| BanI | GGYRCC | 2 cut(s) | 350, 2006 |
| BanII | GRGCYC | 1 cut(s) | 229 |
| Bbv12I | GWGCWC | 1 cut(s) | 295 |
| BbvCI | CCTCAGC | 1 cut(s) | 695 |
| BbvI | GCAGC | 1 cut(s) | 1721 |
| BccI | CCATC | 7 cut(s) | 305, 515, 1430, 1453, 1558, 1897, 2363 |
| BceAI | ACGGC | 2 cut(s) | 338, 1167 |
| BciT130I | CCWGG | 1 cut(s) | 34 |
| BcoDI | GTCTC | 5 cut(s) | 15, 1076, 1278, 1961, 2263 |
| BcuI | ACTAGT | 1 cut(s) | 52 |
| BfmI | CTRYAG | 2 cut(s) | 1056, 2264 |
| BglII | AGATCT | 2 cut(s) | 1594, 1894 |
| BisI | GCNGC | 1 cut(s) | 1710 |
| BlnI | CCTAGG | 1 cut(s) | 2216 |
| BlpI | GCTNAGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 1711 |
| Bme1390I | CCNGG | 1 cut(s) | 34 |
| Bme18I | GGWCC | 2 cut(s) | 846, 1157 |
| BmeT110I | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| BmgT120I | GGNCC | 2 cut(s) | 846, 1157 |
| BmiI | GGNNCC | 6 cut(s) | 352, 848, 1158, 1690, 1887, 2008 |
| BmrFI | CCNGG | 1 cut(s) | 34 |
| BmrI | ACTGGG | 1 cut(s) | 2406 |
| BmsI | GCATC | 3 cut(s) | 1192, 1799, 2296 |
| BmuI | ACTGGG | 1 cut(s) | 2406 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 812, 844, 1985, 2017 |
| BpmI | CTGGAG | 3 cut(s) | 740, 894, 1744 |
| Bpu10I | CCTNAGC | 1 cut(s) | 695 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 165 |
| Bpu14I | TTCGAA | 1 cut(s) | 452 |
| BsaAI | YACGTR | 1 cut(s) | 158 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1421 |
| BsaI | GGTCTC | 1 cut(s) | 1961 |
| BsaJI | CCNNGG | 7 cut(s) | 32, 221, 584, 1160, 1221, 1704, 2216 |
| BsaWI | WCCGGW | 1 cut(s) | 673 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 867, 897, 1312, 1342 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1722 |
| Bse1I | ACTGG | 8 cut(s) | 170, 748, 877, 1011, 1727, 1824, 2036, 2412 |
| Bse3DI | GCAATG | 2 cut(s) | 1190, 2479 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1421 |
| BseAI | TCCGGA | 1 cut(s) | 673 |
| BseBI | CCWGG | 1 cut(s) | 34 |
| BseDI | CCNNGG | 7 cut(s) | 32, 221, 584, 1160, 1221, 1704, 2216 |
| BseGI | GGATG | 4 cut(s) | 526, 1207, 1464, 2437 |
| BseJI | GATNNNNATC | 1 cut(s) | 1421 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1722 |
| BseMI | GCAATG | 2 cut(s) | 1190, 2479 |
| BseNI | ACTGG | 8 cut(s) | 170, 748, 877, 1011, 1727, 1824, 2036, 2412 |
| BseRI | GAGGAG | 6 cut(s) | 86, 95, 98, 476, 655, 1594 |
| BseSI | GKGCMC | 1 cut(s) | 295 |
| BseXI | GCAGC | 1 cut(s) | 1721 |
| BseYI | CCCAGC | 1 cut(s) | 320 |
| BsgI | GTGCAG | 1 cut(s) | 1892 |
| Bsh1236I | CGCG | 2 cut(s) | 2099, 2274 |
| BshFI | GGCC | 4 cut(s) | 1182, 1634, 1674, 2215 |
| BshNI | GGYRCC | 2 cut(s) | 350, 2006 |
| BsiHKAI | GWGCWC | 1 cut(s) | 295 |
| BsiHKCI | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| BsiSI | CCGG | 1 cut(s) | 674 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1722 |
| BsmAI | GTCTC | 5 cut(s) | 15, 1076, 1278, 1961, 2263 |
| BsmBI | CGTCTC | 1 cut(s) | 2263 |
| BsmI | GAATGC | 4 cut(s) | 325, 672, 720, 2383 |
| BsnI | GGCC | 4 cut(s) | 1182, 1634, 1674, 2215 |
| Bso31I | GGTCTC | 1 cut(s) | 1961 |
| BsoBI | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| Bsp119I | TTCGAA | 1 cut(s) | 452 |
| Bsp1286I | GDGCHC | 2 cut(s) | 229, 295 |
| Bsp13I | TCCGGA | 1 cut(s) | 673 |
| Bsp1407I | TGTACA | 1 cut(s) | 946 |
| Bsp143I | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 165 |
| Bsp19I | CCATGG | 1 cut(s) | 1704 |
| Bsp68I | TCGCGA | 1 cut(s) | 2099 |
| BspACI | CCGC | 3 cut(s) | 659, 688, 1080 |
| BspANI | GGCC | 4 cut(s) | 1182, 1634, 1674, 2215 |
| BspEI | TCCGGA | 1 cut(s) | 673 |
| BspFNI | CGCG | 2 cut(s) | 2099, 2274 |
| BspHI | TCATGA | 1 cut(s) | 679 |
| BspLI | GGNNCC | 6 cut(s) | 352, 848, 1158, 1690, 1887, 2008 |
| BspPI | GGATC | 3 cut(s) | 684, 2393, 2515 |
| BspQI | GCTCTTC | 1 cut(s) | 813 |
| BspT104I | TTCGAA | 1 cut(s) | 452 |
| BspT107I | GGYRCC | 2 cut(s) | 350, 2006 |
| BspTNI | GGTCTC | 1 cut(s) | 1961 |
| BsrDI | GCAATG | 2 cut(s) | 1190, 2479 |
| BsrGI | TGTACA | 1 cut(s) | 946 |
| BsrI | ACTGG | 8 cut(s) | 170, 748, 877, 1011, 1727, 1824, 2036, 2412 |
| BssECI | CCNNGG | 7 cut(s) | 32, 221, 584, 1160, 1221, 1704, 2216 |
| BssMI | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| BssT1I | CCWWGG | 4 cut(s) | 221, 584, 1704, 2216 |
| Bst2UI | CCWGG | 1 cut(s) | 34 |
| Bst4CI | ACNGT | 6 cut(s) | 206, 287, 968, 1164, 1307, 1324 |
| Bst6I | CTCTTC | 9 cut(s) | 93, 584, 813, 1394, 1569, 1759, 2208, 2421, 2436 |
| BstAUI | TGTACA | 1 cut(s) | 946 |
| BstBAI | YACGTR | 1 cut(s) | 158 |
| BstBI | TTCGAA | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 3 cut(s) | 1022, 1314, 2241 |
| BstDSI | CCRYGG | 3 cut(s) | 1160, 1221, 1704 |
| BstF5I | GGATG | 4 cut(s) | 526, 1207, 1464, 2437 |
| BstFNI | CGCG | 2 cut(s) | 2099, 2274 |
| BstKTI | GATC | 8 cut(s) | 474, 679, 896, 1132, 1597, 1897, 2401, 2510 |
| BstMAI | GTCTC | 5 cut(s) | 15, 1076, 1278, 1961, 2263 |
| BstMBI | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 224, 489, 1418, 1787, 1856, 2035, 2089 |
| BstNI | CCWGG | 1 cut(s) | 34 |
| BstNSI | RCATGY | 3 cut(s) | 1024, 1449, 1790 |
| BstSCI | CCNGG | 1 cut(s) | 32 |
| BstSFI | CTRYAG | 2 cut(s) | 1056, 2264 |
| BstSLI | GKGCMC | 1 cut(s) | 295 |
| BstUI | CGCG | 2 cut(s) | 2099, 2274 |
| BstV1I | GCAGC | 1 cut(s) | 1721 |
| BstX2I | RGATCY | 3 cut(s) | 1594, 1894, 2507 |
| BstYI | RGATCY | 3 cut(s) | 1594, 1894, 2507 |
| BsuRI | GGCC | 4 cut(s) | 1182, 1634, 1674, 2215 |
| BtgI | CCRYGG | 3 cut(s) | 1160, 1221, 1704 |
| BtgZI | GCGATG | 1 cut(s) | 2080 |
| BtsCI | GGATG | 4 cut(s) | 526, 1207, 1464, 2437 |
| BtsI | GCAGTG | 1 cut(s) | 571 |
| BtsIMutI | CAGTG | 7 cut(s) | 177, 292, 571, 1018, 1720, 2029, 2419 |
| BtuMI | TCGCGA | 1 cut(s) | 2099 |
| Cac8I | GCNNGC | 3 cut(s) | 1022, 1314, 2241 |
| CciI | TCATGA | 1 cut(s) | 679 |
| Cfr13I | GGNCC | 2 cut(s) | 846, 1157 |
| CseI | GACGC | 1 cut(s) | 2280 |
| Csp6I | GTAC | 7 cut(s) | 56, 155, 947, 1325, 1436, 1491, 2007 |
| CviQI | GTAC | 7 cut(s) | 56, 155, 947, 1325, 1436, 1491, 2007 |
| DpnI | GATC | 8 cut(s) | 473, 678, 895, 1131, 1596, 1896, 2400, 2509 |
| DpnII | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| Eam1104I | CTCTTC | 9 cut(s) | 93, 584, 813, 1394, 1569, 1759, 2208, 2421, 2436 |
| EarI | CTCTTC | 9 cut(s) | 93, 584, 813, 1394, 1569, 1759, 2208, 2421, 2436 |
| EciI | GGCGGA | 1 cut(s) | 674 |
| Eco130I | CCWWGG | 4 cut(s) | 221, 584, 1704, 2216 |
| Eco147I | AGGCCT | 1 cut(s) | 2215 |
| Eco24I | GRGCYC | 1 cut(s) | 229 |
| Eco31I | GGTCTC | 1 cut(s) | 1961 |
| Eco47I | GGWCC | 2 cut(s) | 846, 1157 |
| Eco57I | CTGAAG | 1 cut(s) | 1231 |
| Eco88I | CYCGRG | 3 cut(s) | 16, 1073, 1808 |
| EcoO109I | RGGNCCY | 1 cut(s) | 846 |
| EcoRII | CCWGG | 1 cut(s) | 32 |
| EcoT14I | CCWWGG | 4 cut(s) | 221, 584, 1704, 2216 |
| EcoT22I | ATGCAT | 1 cut(s) | 1792 |
| EcoT38I | GRGCYC | 1 cut(s) | 229 |
| ErhI | CCWWGG | 4 cut(s) | 221, 584, 1704, 2216 |
| Esp3I | CGTCTC | 1 cut(s) | 2263 |
| FauNDI | CATATG | 2 cut(s) | 955, 984 |
| Fnu4HI | GCNGC | 1 cut(s) | 1710 |
| FokI | GGATG | 4 cut(s) | 533, 1214, 1471, 2444 |
| FriOI | GRGCYC | 1 cut(s) | 229 |
| Fsp4HI | GCNGC | 1 cut(s) | 1710 |
| GluI | GCNGC | 1 cut(s) | 1710 |
| GsaI | CCCAGC | 1 cut(s) | 324 |
| GsuI | CTGGAG | 3 cut(s) | 740, 894, 1744 |
| HaeIII | GGCC | 4 cut(s) | 1182, 1634, 1674, 2215 |
| HapII | CCGG | 1 cut(s) | 674 |
| HgaI | GACGC | 1 cut(s) | 2280 |
| HindIII | AAGCTT | 3 cut(s) | 370, 1388, 1662 |
| HinfI | GANTC | 4 cut(s) | 175, 260, 1076, 1769 |
| HpaII | CCGG | 1 cut(s) | 674 |
| HphI | GGTGA | 4 cut(s) | 536, 632, 775, 2062 |
| Hpy166II | GTNNAC | 5 cut(s) | 293, 947, 1160, 1493, 1999 |
| Hpy188III | TCNNGA | 9 cut(s) | 308, 674, 680, 1073, 1503, 1810, 2098, 2141, 2453 |
| Hpy8I | GTNNAC | 5 cut(s) | 293, 947, 1160, 1493, 1999 |
| Hpy99I | CGWCG | 1 cut(s) | 384 |
| HpyCH4III | ACNGT | 6 cut(s) | 206, 287, 968, 1164, 1307, 1324 |
| HpyCH4IV | ACGT | 3 cut(s) | 157, 929, 1429 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 224, 489, 1418, 1787, 1856, 2035, 2089 |
| HpySE526I | ACGT | 3 cut(s) | 157, 929, 1429 |
| Kpn2I | TCCGGA | 1 cut(s) | 673 |
| KpnI | GGTACC | 1 cut(s) | 2010 |
| Kzo9I | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| LguI | GCTCTTC | 1 cut(s) | 813 |
| LmnI | GCTCC | 3 cut(s) | 223, 642, 661 |
| Lsp1109I | GCAGC | 1 cut(s) | 1721 |
| LweI | GCATC | 3 cut(s) | 1192, 1799, 2296 |
| MaeII | ACGT | 3 cut(s) | 157, 929, 1429 |
| MaeIII | GTNAC | 2 cut(s) | 739, 1558 |
| MalI | GATC | 8 cut(s) | 473, 678, 895, 1131, 1596, 1896, 2400, 2509 |
| MboI | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| MfeI | CAATTG | 1 cut(s) | 1733 |
| MflI | RGATCY | 3 cut(s) | 1594, 1894, 2507 |
| MhlI | GDGCHC | 2 cut(s) | 229, 295 |
| MlyI | GAGTC | 1 cut(s) | 1085 |
| MmeI | TCCRAC | 3 cut(s) | 715, 1624, 2485 |
| Mph1103I | ATGCAT | 1 cut(s) | 1792 |
| MroI | TCCGGA | 1 cut(s) | 673 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1768, 1970 |
| MseI | TTAA | 7 cut(s) | 357, 485, 834, 1167, 1589, 1919, 2210 |
| MslI | CAYNNNNRTG | 1 cut(s) | 288 |
| MspI | CCGG | 1 cut(s) | 674 |
| MspR9I | CCNGG | 1 cut(s) | 34 |
| MunI | CAATTG | 1 cut(s) | 1733 |
| Mva1269I | GAATGC | 4 cut(s) | 325, 672, 720, 2383 |
| MvaI | CCWGG | 1 cut(s) | 34 |
| MvnI | CGCG | 2 cut(s) | 2099, 2274 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 224, 489, 1418, 1787, 1856, 2035, 2089 |
| NcoI | CCATGG | 1 cut(s) | 1704 |
| NdeI | CATATG | 2 cut(s) | 955, 984 |
| NdeII | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| NlaIV | GGNNCC | 6 cut(s) | 352, 848, 1158, 1690, 1887, 2008 |
| NmuCI | GTSAC | 1 cut(s) | 1558 |
| NruI | TCGCGA | 1 cut(s) | 2099 |
| NsiI | ATGCAT | 1 cut(s) | 1792 |
| NspI | RCATGY | 3 cut(s) | 1024, 1449, 1790 |
| NspV | TTCGAA | 1 cut(s) | 452 |
| OliI | CACNNNNGTG | 1 cut(s) | 288 |
| PaeI | GCATGC | 1 cut(s) | 1024 |
| PaeR7I | CTCGAG | 2 cut(s) | 1073, 1808 |
| PagI | TCATGA | 1 cut(s) | 679 |
| PceI | AGGCCT | 1 cut(s) | 2215 |
| PciI | ACATGT | 1 cut(s) | 1445 |
| PciSI | GCTCTTC | 1 cut(s) | 813 |
| PctI | GAATGC | 4 cut(s) | 325, 672, 720, 2383 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1768, 1970 |
| PfeI | GAWTC | 3 cut(s) | 175, 260, 1769 |
| PflFI | GACNNNGTC | 1 cut(s) | 1275 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1722 |
| PkrI | GCNGC | 1 cut(s) | 1711 |
| PleI | GAGTC | 1 cut(s) | 1084 |
| PpsI | GAGTC | 1 cut(s) | 1084 |
| Ppu21I | YACGTR | 1 cut(s) | 158 |
| PpuMI | RGGWCCY | 1 cut(s) | 846 |
| PscI | ACATGT | 1 cut(s) | 1445 |
| Psp5II | RGGWCCY | 1 cut(s) | 846 |
| Psp6I | CCWGG | 1 cut(s) | 32 |
| PspFI | CCCAGC | 1 cut(s) | 320 |
| PspGI | CCWGG | 1 cut(s) | 32 |
| PspN4I | GGNNCC | 6 cut(s) | 352, 848, 1158, 1690, 1887, 2008 |
| PspPI | GGNCC | 2 cut(s) | 846, 1157 |
| PspPPI | RGGWCCY | 1 cut(s) | 846 |
| PsuI | RGATCY | 3 cut(s) | 1594, 1894, 2507 |
| PsyI | GACNNNGTC | 1 cut(s) | 1275 |
| RruI | TCGCGA | 1 cut(s) | 2099 |
| RsaI | GTAC | 7 cut(s) | 57, 156, 948, 1326, 1437, 1492, 2008 |
| RsaNI | GTAC | 7 cut(s) | 56, 155, 947, 1325, 1436, 1491, 2007 |
| RseI | CAYNNNNRTG | 1 cut(s) | 288 |
| SapI | GCTCTTC | 1 cut(s) | 813 |
| SaqAI | TTAA | 7 cut(s) | 357, 485, 834, 1167, 1589, 1919, 2210 |
| SatI | GCNGC | 1 cut(s) | 1710 |
| Sau3AI | GATC | 8 cut(s) | 471, 676, 893, 1129, 1594, 1894, 2398, 2507 |
| Sau96I | GGNCC | 2 cut(s) | 846, 1157 |
| SchI | GAGTC | 1 cut(s) | 1085 |
| ScrFI | CCNGG | 1 cut(s) | 34 |
| SduI | GDGCHC | 2 cut(s) | 229, 295 |
| SfaNI | GCATC | 3 cut(s) | 1192, 1799, 2296 |
| SfcI | CTRYAG | 2 cut(s) | 1056, 2264 |
| Sfr274I | CTCGAG | 2 cut(s) | 1073, 1808 |
| SfuI | TTCGAA | 1 cut(s) | 452 |
| SinI | GGWCC | 2 cut(s) | 846, 1157 |
| SlaI | CTCGAG | 2 cut(s) | 1073, 1808 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 288 |
| SmlI | CTYRAG | 2 cut(s) | 1073, 1808 |
| SmoI | CTYRAG | 2 cut(s) | 1073, 1808 |
| SpeI | ACTAGT | 1 cut(s) | 52 |
| SphI | GCATGC | 1 cut(s) | 1024 |
| SseBI | AGGCCT | 1 cut(s) | 2215 |
| SsiI | CCGC | 3 cut(s) | 659, 688, 1080 |
| StuI | AGGCCT | 1 cut(s) | 2215 |
| StyD4I | CCNGG | 1 cut(s) | 32 |
| StyI | CCWWGG | 4 cut(s) | 221, 584, 1704, 2216 |
| TaaI | ACNGT | 6 cut(s) | 206, 287, 968, 1164, 1307, 1324 |
| TaiI | ACGT | 3 cut(s) | 160, 932, 1432 |
| TaqI | TCGA | 5 cut(s) | 440, 452, 1074, 1752, 1809 |
| TaqII | GACCGA | 1 cut(s) | 2241 |
| TatI | WGTACW | 3 cut(s) | 55, 946, 1435 |
| TfiI | GAWTC | 3 cut(s) | 175, 260, 1769 |
| Tru1I | TTAA | 7 cut(s) | 357, 485, 834, 1167, 1589, 1919, 2210 |
| Tru9I | TTAA | 7 cut(s) | 357, 485, 834, 1167, 1589, 1919, 2210 |
| TscAI | CASTG | 7 cut(s) | 177, 292, 571, 1018, 1727, 2036, 2419 |
| TseFI | GTSAC | 1 cut(s) | 1558 |
| TseI | GCWGC | 1 cut(s) | 1709 |
| Tsp45I | GTSAC | 1 cut(s) | 1558 |
| TspGWI | ACGGA | 4 cut(s) | 665, 930, 1210, 1934 |
| TspRI | CASTG | 7 cut(s) | 177, 292, 571, 1018, 1727, 2036, 2419 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1275 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1722 |
| VneI | GTGCAC | 1 cut(s) | 291 |
| VpaK11BI | GGWCC | 2 cut(s) | 846, 1157 |
| XapI | RAATTY | 3 cut(s) | 26, 855, 2221 |
| XbaI | TCTAGA | 2 cut(s) | 1502, 2140 |
| XceI | RCATGY | 3 cut(s) | 1024, 1449, 1790 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1682 |
| XhoI | CTCGAG | 2 cut(s) | 1073, 1808 |
| XmaJI | CCTAGG | 1 cut(s) | 2216 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1768, 1970 |
| Zsp2I | ATGCAT | 1 cut(s) | 1792 |