RchiOBHm_Chr2g0093501

Chloroplastic group IIA intron splicing facilitator CRS1

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
6783953 .. 6788438
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46855

Sequence Viewer

Length: 2856 bp
ATGGCGCTTTCTCTATCGTCAGTGTACCCAACTAGTACTTGTTCCTCTTCTTTTAGCTTCAATGCTCCTCAGTGCTTTCTTCACTCTTCCGGAACATGCAGAGCTCACAGGTTCAGAGTTTCATGCAAGACTGTTCAAATTGAGACTCAGCAGCAGCAACCCCAAAGAATCAAAGTTGCTATTACAAAGAAGAAGAGGAAGCCAAAGCCAAGCTTCTATCAGCAAATTCAGGACAAATGGTCCATGAAAGTGGGTTCCCCAAGAGACAAATTTCCATGGCAGAAGCAGGAGGAATTAGAACAAGAGGATGAAGAGGAAGAAGAAGAAGAAGAAAGTGAAAGTCAGGAATCAGAGGTTAGAGTGTCTAAACCAGTTATTCAAGAAGTGAGCTTTTCTTTGCCAAATTCTGTAAAGTATGCTCCTTGGGCTCATAGAAGCACACCCATTAAGCCCCAGGTTGATTCCATTAATCCCCAGATTGATTATCAGCCTGAAACTTATGAACCCATGGTTGAACATGGTGGCATTGATTCTACTAATGGTTACAGTAAAGCTAAAAACTTTAGGCAAGAATTTGATGGTAGTGGTAAATTGGATAGGGAAATTGATGAAGTTTCAGTTGGGTTTTCGAAACAGCAAGAGGAAGACGTTGATAGAAATGGGAAATTGGAGAGAGCAATTGATGGGGTTTCCAAAGAGGAAAAGATAATAATTTTGAAAAGCTTTGAACATAGAAATGGCAAATTGGAGGGACAGATTGATGGAATTTCAGTTGGTGTTTCAAAAAAGGAGGAGATGGTGATTTCACAAGGCTTAATTGGGGCTGCTGTGGATGAAATTCTATCTGGGGATAGAGAAAATGATGAAAATGCGGTACCTTTTGTGTCTTCTGGTCGTGATTCTCGAGCTTCTACTCGGTTGCCTTGGGAAAGAGAAGGTGAATTGGGTAATGGGGAAGGTGGTAAGACAAGAAAGAAGTGGAGTAATACGCTTTCGGCTGAGGCATCCCTTCCGGAGCATGAGTTGAAGAGGCTAAGGAATGTTTCTTTGAGGATGCTGGAAAGGACTAAGGTCGGAGCTGCCGGTATCACACAGGGTTTGGTGGATGCTATACATGAGAAGTGGAAGGTGGATGAAGTGGTCAAGTTGAAGTTTGAGGAGCCACTCTCACTTAACATGAAAAGAACTCATGGCATTTTAGAGAGTAAAACTGGAGGTTTGGTTATATGGAGATCAGGCAGTTCAGTAGTGTTATACAGGGGAATATCATACAATCTTCCGTGTGTAAAGTCATATACCAAACAGAGCCAGACCGGTTCACATATGTTACAAGACTCGGAGGATAACGTCACGAGTGATGGCACACAGAATGTAGGACTGAAGGATGTGGCTAGTACTGCAGAATTTTTCAGCCCAAATTCTCCAAAGTATTTGAAGGATTTATCTAAAAGAGAACTCATGGACTTGAGCGATCTAAACCATTTGTTAGATGAGTTGGGTCCACGGTTTAAGGATTGGATAGGCCGTGAGCCATTGCCTGTGGATGCTGACTTACTTCCTGCCGTGGTTCCTGGATATCAAACACCCTTTAGACTTCTCCCTTATGGGGTAAGACGTGGTCTGAGAGACAAGGACATGACAAAATTCCGTAGGCTTGCTAGAGCTGCACCTCCACACTTTGCTCTAGGAAGGAGTAAAGAACTGCAAGGTCTGGCTACGGCTATGGTGAAGCTGTGGGAGAAATGTGCTATTGCAAAGATAGCCATCAAACGCGGAGTACAGAATACACGTAATGAAAGAATGGCAGAGGAACTCAAGAAATTGACTGGGGGTACACTTCTCTCTAGAAACAAAGATTATATTGTCTTTTACAGGGGCAATGACTTCTTGCCATCTGTTGTTACTGGAGTACTGAAAGAGAGGAGAAAATTGAGAGATCTCCAACAAGATGAGGAGGAACAAGCACGACAAATGACCTCTGACTACATTGAGTCAAGATCAAAAGCTTCTAATGGCCAACTGGTTGCTGGAACCCTTGCCGAGACCAAGGCAGCGACCACTCGCTGGAAAAACCAGCTGACGATTGAAGATGTCAATAAAATGACGAGAGATTCAACTTTGGTTAAAGGTGCATCGCTAGTCAGACACCTCGAGAAGAAACTGGCTTTTGCAAAAGGGAAGCTCAAAAAGGCTGAGAAGGCTTTAGCAAAAGTGCAGGAAAAGTTGGACCCAGCAGATCTGCCGGATGATCTGGAAATCCTAACGGATGAGGACAGGTTCTTGTTTCGTAAGATTGGTCTCAGTATGAAACCCTTCCTACTTTTAGGGAGGCGAGAGGTTTACTCTGGTACCATAGAGAACATGCACTTGCACTGGAAACATAGAGAGTTGGTGAAGATAATAGTGAGAGGAAAAAGTTTTCAGCAAGTCAAGCATATAGCAATCTCCTTGGAAGCAGAGAGTGGCGGGCTGCTAGTATCTCTAGATAAAACTACCAAAGGGTATGCAATTATTGTATATCGTGGGAAGAACTATCAATGTCCTCTTCCATTAAGGCCTAGGAATCTATTGACAAGAAGACAGGCATTAGCTCGGTCAATTGAACTACAGAGACGCGAGGGATTGAAGCATCATCTCTCAGATTTACAGGAGAGAATTGAGTTGTTGAAATCTGAACTAGAGGAAATGGAAAATGAGAGGATGGTTGATGATGGAAGAACCTTGCGTTCAACATTAGATGATTCTCTTTTCTCCAGTGACAGTGAAGAGGACGAAGGGGAAGAAGCATATCTTGAAGTATATGATAGTGGCAATGAGGATAACTGTGATGAACATGAGGTTGTTGAACCAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

951

Amino Acids

107.79

Weight (kDa)

6.88

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRS1_YhbY PF01985 337 - 420 9.3e-19 CRS1 / YhbY (CRM) domain
CRS1_YhbY PF01985 541 - 625 4.8e-15 CRS1 / YhbY (CRM) domain
CRS1_YhbY PF01985 754 - 841 1.9e-16 CRS1 / YhbY (CRM) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010924)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 874, 2348
AccB1I GGYRCC 2 cut(s) 874, 2348
AccB7I CCANNNNNTGG 1 cut(s) 2064
AccII CGCG 2 cut(s) 1773, 2616
AccIII TCCGGA 2 cut(s) 89, 1012
AciI CCGC 3 cut(s) 872, 1773, 2466
AcoI YGGCCR 1 cut(s) 2014
AcsI RAATTY 9 cut(s) 225, 269, 403, 572, 765, 837, 1403, 1417, 1643
AcuI CTGAAG 1 cut(s) 1400
AfaI GTAC 8 cut(s) 26, 37, 876, 1396, 1779, 1834, 1911, 2350
AfiI CCNNNNNNNGG 2 cut(s) 1606, 2064
AflIII ACRYGT 1 cut(s) 1787
AgeI ACCGGT 1 cut(s) 1313
AhdI GACNNNNNGTC 1 cut(s) 238
AhlI ACTAGT 1 cut(s) 32
AjiI CACGTC 1 cut(s) 1616
AjnI CCWGG 2 cut(s) 453, 1570
AjuI GAANNNNNNNTTGG 2 cut(s) 603, 635
Alw21I GWGCWC 1 cut(s) 106
Alw26I GTCTC 6 cut(s) 137, 258, 1620, 2036, 2303, 2605
Ama87I CYCGRG 2 cut(s) 903, 2150
Aor13HI TCCGGA 2 cut(s) 89, 1012
AoxI GGCC 3 cut(s) 1522, 2014, 2555
ApeKI GCWGC 7 cut(s) 151, 154, 824, 1079, 1664, 2051, 2470
ApoI RAATTY 9 cut(s) 225, 269, 403, 572, 765, 837, 1403, 1417, 1643
AseI ATTAAT 1 cut(s) 468
AsiGI ACCGGT 1 cut(s) 1313
Asp700I GAANNNNTTC 1 cut(s) 2312
Asp718I GGTACC 2 cut(s) 874, 2348
AspA2I CCTAGG 1 cut(s) 2558
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 3 cut(s) 240, 1499, 2227
AsuHPI GGTGA 4 cut(s) 811, 950, 1738, 2404
AsuII TTCGAA 1 cut(s) 629
AvaI CYCGRG 2 cut(s) 903, 2150
AvaII GGWCC 3 cut(s) 240, 1499, 2227
AvrII CCTAGG 1 cut(s) 2558
BaeI ACNNNNGTAYC 2 cut(s) 2332, 2365
BalI TGGCCA 1 cut(s) 2016
BanI GGYRCC 2 cut(s) 874, 2348
BanII GRGCYC 2 cut(s) 106, 430
BauI CACGAG 1 cut(s) 1351
BbsI GAAGAC 3 cut(s) 651, 879, 2584
Bbv12I GWGCWC 1 cut(s) 106
BbvCI CCTCAGC 1 cut(s) 999
BbvI GCAGC 7 cut(s) 163, 166, 811, 1066, 1651, 2063, 2457
BccI CCATC 9 cut(s) 572, 677, 755, 790, 1352, 1772, 1900, 2695, 2705
BceAI ACGGC 3 cut(s) 1509, 1547, 1734
BciT130I CCWGG 2 cut(s) 455, 1572
BcoDI GTCTC 6 cut(s) 137, 258, 1620, 2036, 2303, 2605
BcuI ACTAGT 1 cut(s) 32
BfmI CTRYAG 2 cut(s) 1398, 2606
BfoI RGCGCY 1 cut(s) 8
BglII AGATCT 2 cut(s) 1936, 2236
BisI GCNGC 7 cut(s) 152, 155, 825, 1080, 1665, 2052, 2471
BlnI CCTAGG 1 cut(s) 2558
BlsI GCNGC 7 cut(s) 153, 156, 826, 1081, 1666, 2053, 2472
BmcAI AGTACT 3 cut(s) 37, 1396, 1911
Bme1390I CCNGG 2 cut(s) 455, 1572
Bme18I GGWCC 3 cut(s) 240, 1499, 2227
BmeRI GACNNNNNGTC 1 cut(s) 238
BmeT110I CYCGRG 2 cut(s) 903, 2150
BmgBI CACGTC 1 cut(s) 1616
BmgT120I GGNCC 3 cut(s) 240, 1499, 2227
BmiI GGNNCC 8 cut(s) 256, 876, 1161, 1500, 1569, 2032, 2229, 2350
BmrFI CCNGG 2 cut(s) 455, 1572
BmrI ACTGGG 1 cut(s) 1836
BmsI GCATC 6 cut(s) 1013, 1044, 1096, 1534, 2141, 2638
BmuI ACTGGG 1 cut(s) 1836
BoxI GACNNNNGTC 1 cut(s) 1070
BpiI GAAGAC 3 cut(s) 651, 879, 2584
BplI GAGNNNNNCTC 4 cut(s) 1151, 1183, 2327, 2359
BpmI CTGGAG 3 cut(s) 1233, 1926, 2737
Bpu10I CCTNAGC 2 cut(s) 999, 1034
Bpu14I TTCGAA 1 cut(s) 629
BpuEI CTTGAG 2 cut(s) 1486, 1799
BsaAI YACGTR 1 cut(s) 1790
BsaBI GATNNNNATC 1 cut(s) 1763
BsaI GGTCTC 2 cut(s) 2036, 2303
BsaWI WCCGGW 3 cut(s) 89, 1012, 1313
BsaXI ACNNNNNCTCC 4 cut(s) 1007, 1037, 1206, 1236
Bsc4I CCNNNNNNNGG 2 cut(s) 1606, 2064
Bse118I RCCGGY 2 cut(s) 1082, 1313
Bse1I ACTGG 9 cut(s) 371, 1216, 1831, 1909, 2025, 2166, 2378, 2754, 2849
Bse3DI GCAATG 3 cut(s) 1532, 1885, 2818
Bse8I GATNNNNATC 1 cut(s) 1763
BseAI TCCGGA 2 cut(s) 89, 1012
BseBI CCWGG 2 cut(s) 455, 1572
BseJI GATNNNNATC 1 cut(s) 1763
BseLI CCNNNNNNNGG 2 cut(s) 1606, 2064
BseMI GCAATG 3 cut(s) 1532, 1885, 2818
BseMII CTCAG 7 cut(s) 83, 161, 990, 1613, 2184, 2314, 2652
BseNI ACTGG 9 cut(s) 371, 1216, 1831, 1909, 2025, 2166, 2378, 2754, 2849
BseRI GAGGAG 5 cut(s) 57, 806, 1172, 1936, 1967
BseXI GCAGC 7 cut(s) 163, 166, 811, 1066, 1651, 2063, 2457
BseYI CCCAGC 1 cut(s) 2230
BsgI GTGCAG 2 cut(s) 1650, 2234
Bsh1236I CGCG 2 cut(s) 1773, 2616
BshFI GGCC 3 cut(s) 1524, 2016, 2557
BshNI GGYRCC 2 cut(s) 874, 2348
BshTI ACCGGT 1 cut(s) 1313
BsiHKAI GWGCWC 1 cut(s) 106
BsiHKCI CYCGRG 2 cut(s) 903, 2150
BsiSI CCGG 5 cut(s) 90, 1013, 1083, 1314, 2243
BslFI GGGAC 1 cut(s) 765
BslI CCNNNNNNNGG 2 cut(s) 1606, 2064
BsmAI GTCTC 6 cut(s) 137, 258, 1620, 2036, 2303, 2605
BsmBI CGTCTC 1 cut(s) 2605
BsmFI GGGAC 1 cut(s) 765
BsnI GGCC 3 cut(s) 1524, 2016, 2557
Bso31I GGTCTC 2 cut(s) 2036, 2303
BsoBI CYCGRG 2 cut(s) 903, 2150
Bsp119I TTCGAA 1 cut(s) 629
Bsp1286I GDGCHC 2 cut(s) 106, 430
Bsp13I TCCGGA 2 cut(s) 89, 1012
Bsp143I GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
Bsp19I CCATGG 2 cut(s) 275, 507
BspACI CCGC 3 cut(s) 872, 1773, 2466
BspANI GGCC 3 cut(s) 1524, 2016, 2557
BspCNI CTCAG 7 cut(s) 82, 160, 991, 1614, 2185, 2313, 2651
BspEI TCCGGA 2 cut(s) 89, 1012
BspFNI CGCG 2 cut(s) 1773, 2616
BspLI GGNNCC 8 cut(s) 256, 876, 1161, 1500, 1569, 2032, 2229, 2350
BspMAI CTGCAG 1 cut(s) 1402
BspT104I TTCGAA 1 cut(s) 629
BspT107I GGYRCC 2 cut(s) 874, 2348
BspTNI GGTCTC 2 cut(s) 2036, 2303
BsrDI GCAATG 3 cut(s) 1532, 1885, 2818
BsrFI RCCGGY 2 cut(s) 1082, 1313
BsrI ACTGG 9 cut(s) 371, 1216, 1831, 1909, 2025, 2166, 2378, 2754, 2849
BssAI RCCGGY 2 cut(s) 1082, 1313
BssMI GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
BssSI CACGAG 1 cut(s) 1351
BssT1I CCWWGG 7 cut(s) 275, 422, 507, 923, 2046, 2448, 2558
Bst2BI CACGAG 1 cut(s) 1351
Bst2UI CCWGG 2 cut(s) 455, 1572
Bst4CI ACNGT 5 cut(s) 133, 548, 1506, 2762, 2825
Bst6I CTCTTC 7 cut(s) 52, 91, 188, 306, 1022, 2550, 2760
BstBAI YACGTR 1 cut(s) 1790
BstBI TTCGAA 1 cut(s) 629
BstC8I GCNNGC 2 cut(s) 1656, 2468
BstDEI CTNAG 9 cut(s) 69, 147, 999, 1034, 1068, 1622, 2193, 2300, 2638
BstDSI CCRYGG 4 cut(s) 275, 507, 1502, 1563
BstFNI CGCG 2 cut(s) 1773, 2616
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 6 cut(s) 1235, 1474, 1939, 2000, 2239, 2251
BstMAI GTCTC 6 cut(s) 137, 258, 1620, 2036, 2303, 2605
BstMBI GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
BstMWI GCNNNNNNNGC 6 cut(s) 425, 1397, 1664, 1760, 2198, 2431
BstNI CCWGG 2 cut(s) 455, 1572
BstNSI RCATGY 2 cut(s) 99, 2365
BstPAI GACNNNNGTC 1 cut(s) 1070
BstSCI CCNGG 2 cut(s) 453, 1570
BstSFI CTRYAG 2 cut(s) 1398, 2606
BstUI CGCG 2 cut(s) 1773, 2616
BstV1I GCAGC 7 cut(s) 163, 166, 811, 1066, 1651, 2063, 2457
BstV2I GAAGAC 3 cut(s) 651, 879, 2584
BstX2I RGATCY 2 cut(s) 1936, 2236
BstXI CCANNNNNNTGG 1 cut(s) 250
BstYI RGATCY 2 cut(s) 1936, 2236
BsuRI GGCC 3 cut(s) 1524, 2016, 2557
BtgI CCRYGG 4 cut(s) 275, 507, 1502, 1563
BtgZI GCGATG 1 cut(s) 2118
BtrI CACGTC 1 cut(s) 1616
BtsIMutI CAGTG 5 cut(s) 27, 77, 2371, 2761, 2767
Cac8I GCNNGC 2 cut(s) 1656, 2468
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 2 cut(s) 1082, 1313
Cfr13I GGNCC 3 cut(s) 240, 1499, 2227
CseI GACGC 1 cut(s) 2622
Csp6I GTAC 8 cut(s) 25, 36, 875, 1395, 1778, 1833, 1910, 2349
CspAI ACCGGT 1 cut(s) 1313
CviQI GTAC 8 cut(s) 25, 36, 875, 1395, 1778, 1833, 1910, 2349
DdeI CTNAG 9 cut(s) 69, 147, 999, 1034, 1068, 1622, 2193, 2300, 2638
DpnI GATC 6 cut(s) 1234, 1473, 1938, 1999, 2238, 2250
DpnII GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
DriI GACNNNNNGTC 1 cut(s) 238
EaeI YGGCCR 1 cut(s) 2014
Eam1104I CTCTTC 7 cut(s) 52, 91, 188, 306, 1022, 2550, 2760
Eam1105I GACNNNNNGTC 1 cut(s) 238
EarI CTCTTC 7 cut(s) 52, 91, 188, 306, 1022, 2550, 2760
Ecl136II GAGCTC 1 cut(s) 104
Eco130I CCWWGG 7 cut(s) 275, 422, 507, 923, 2046, 2448, 2558
Eco147I AGGCCT 1 cut(s) 2557
Eco24I GRGCYC 2 cut(s) 106, 430
Eco31I GGTCTC 2 cut(s) 2036, 2303
Eco32I GATATC 1 cut(s) 1577
Eco47I GGWCC 3 cut(s) 240, 1499, 2227
Eco53kI GAGCTC 1 cut(s) 104
Eco57I CTGAAG 1 cut(s) 1400
Eco88I CYCGRG 2 cut(s) 903, 2150
EcoICRI GAGCTC 1 cut(s) 104
EcoRII CCWGG 2 cut(s) 453, 1570
EcoRV GATATC 1 cut(s) 1577
EcoT14I CCWWGG 7 cut(s) 275, 422, 507, 923, 2046, 2448, 2558
EcoT38I GRGCYC 2 cut(s) 106, 430
ErhI CCWWGG 7 cut(s) 275, 422, 507, 923, 2046, 2448, 2558
Esp3I CGTCTC 1 cut(s) 2605
FalI AAGNNNNNCTT 4 cut(s) 197, 229, 2775, 2807
FaqI GGGAC 1 cut(s) 765
FauI CCCGC 1 cut(s) 2459
FauNDI CATATG 1 cut(s) 1323
Fnu4HI GCNGC 7 cut(s) 152, 155, 825, 1080, 1665, 2052, 2471
FriOI GRGCYC 2 cut(s) 106, 430
Fsp4HI GCNGC 7 cut(s) 152, 155, 825, 1080, 1665, 2052, 2471
GlaI GCGC 1 cut(s) 6
GluI GCNGC 7 cut(s) 152, 155, 825, 1080, 1665, 2052, 2471
GsaI CCCAGC 1 cut(s) 2234
GsuI CTGGAG 3 cut(s) 1233, 1926, 2737
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 1524, 2016, 2557
HapII CCGG 5 cut(s) 90, 1013, 1083, 1314, 2243
HgaI GACGC 1 cut(s) 2622
HhaI GCGC 1 cut(s) 7
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 3 cut(s) 211, 721, 2004
HpaII CCGG 5 cut(s) 90, 1013, 1083, 1314, 2243
HphI GGTGA 4 cut(s) 811, 950, 1738, 2404
Hpy166II GTNNAC 5 cut(s) 25, 1319, 1502, 1835, 2341
Hpy188I TCNGA 9 cut(s) 116, 352, 1076, 1339, 1623, 1981, 2144, 2641, 2674
Hpy8I GTNNAC 5 cut(s) 25, 1319, 1502, 1835, 2341
HpyCH4III ACNGT 5 cut(s) 133, 548, 1506, 2762, 2825
HpyCH4IV ACGT 4 cut(s) 648, 1347, 1615, 1789
HpyF10VI GCNNNNNNNGC 6 cut(s) 425, 1397, 1664, 1760, 2198, 2431
HpyF3I CTNAG 9 cut(s) 69, 147, 999, 1034, 1068, 1622, 2193, 2300, 2638
HpySE526I ACGT 4 cut(s) 648, 1347, 1615, 1789
HspAI GCGC 1 cut(s) 5
Kpn2I TCCGGA 2 cut(s) 89, 1012
KpnI GGTACC 2 cut(s) 878, 2352
Kzo9I GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
LmnI GCTCC 5 cut(s) 70, 424, 1015, 1076, 1159
Lsp1109I GCAGC 7 cut(s) 163, 166, 811, 1066, 1651, 2063, 2457
LweI GCATC 6 cut(s) 1013, 1044, 1096, 1534, 2141, 2638
MaeII ACGT 4 cut(s) 648, 1347, 1615, 1789
MaeIII GTNAC 5 cut(s) 542, 1326, 1348, 1900, 2756
MalI GATC 6 cut(s) 1234, 1473, 1938, 1999, 2238, 2250
MboI GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
MfeI CAATTG 2 cut(s) 678, 2598
MflI RGATCY 2 cut(s) 1936, 2236
MhlI GDGCHC 2 cut(s) 106, 430
MlsI TGGCCA 1 cut(s) 2016
MluNI TGGCCA 1 cut(s) 2016
MlyI GAGTC 3 cut(s) 139, 1328, 2000
MmeI TCCRAC 3 cut(s) 1054, 1966, 2205
Mox20I TGGCCA 1 cut(s) 2016
MroI TCCGGA 2 cut(s) 89, 1012
MroXI GAANNNNTTC 1 cut(s) 2312
MscI TGGCCA 1 cut(s) 2016
MseI TTAA 7 cut(s) 447, 468, 815, 1173, 1509, 2124, 2552
MslI CAYNNNNRTG 2 cut(s) 248, 735
Msp20I TGGCCA 1 cut(s) 2016
MspA1I CMGCKG 1 cut(s) 2077
MspI CCGG 5 cut(s) 90, 1013, 1083, 1314, 2243
MspR9I CCNGG 2 cut(s) 455, 1572
MunI CAATTG 2 cut(s) 678, 2598
MvaI CCWGG 2 cut(s) 455, 1572
MvnI CGCG 2 cut(s) 1773, 2616
MwoI GCNNNNNNNGC 6 cut(s) 425, 1397, 1664, 1760, 2198, 2431
NcoI CCATGG 2 cut(s) 275, 507
NdeI CATATG 1 cut(s) 1323
NdeII GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
NlaIV GGNNCC 8 cut(s) 256, 876, 1161, 1500, 1569, 2032, 2229, 2350
NmeAIII GCCGAG 1 cut(s) 2065
NmuCI GTSAC 2 cut(s) 1348, 2756
NspI RCATGY 2 cut(s) 99, 2365
NspV TTCGAA 1 cut(s) 629
PaeR7I CTCGAG 2 cut(s) 903, 2150
PceI AGGCCT 1 cut(s) 2557
PcsI WCGNNNNNNNCGW 1 cut(s) 901
PdmI GAANNNNTTC 1 cut(s) 2312
PfeI GAWTC 8 cut(s) 168, 347, 461, 530, 899, 2111, 2563, 2741
PflFI GACNNNGTC 1 cut(s) 1617
PflMI CCANNNNNTGG 1 cut(s) 2064
PfoI TCCNGGA 1 cut(s) 1570
PinAI ACCGGT 1 cut(s) 1313
PkrI GCNGC 7 cut(s) 153, 156, 826, 1081, 1666, 2053, 2472
PleI GAGTC 3 cut(s) 139, 1328, 1999
PpsI GAGTC 3 cut(s) 139, 1328, 1999
Ppu21I YACGTR 1 cut(s) 1790
PshAI GACNNNNGTC 1 cut(s) 1070
PshBI ATTAAT 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 106
Psp6I CCWGG 2 cut(s) 453, 1570
PspFI CCCAGC 1 cut(s) 2230
PspGI CCWGG 2 cut(s) 453, 1570
PspN4I GGNNCC 8 cut(s) 256, 876, 1161, 1500, 1569, 2032, 2229, 2350
PspPI GGNCC 3 cut(s) 240, 1499, 2227
PstI CTGCAG 1 cut(s) 1402
PsuI RGATCY 2 cut(s) 1936, 2236
PsyI GACNNNGTC 1 cut(s) 1617
PvuII CAGCTG 1 cut(s) 2077
RsaI GTAC 8 cut(s) 26, 37, 876, 1396, 1779, 1834, 1911, 2350
RsaNI GTAC 8 cut(s) 25, 36, 875, 1395, 1778, 1833, 1910, 2349
RseI CAYNNNNRTG 2 cut(s) 248, 735
SacI GAGCTC 1 cut(s) 106
SaqAI TTAA 7 cut(s) 447, 468, 815, 1173, 1509, 2124, 2552
SatI GCNGC 7 cut(s) 152, 155, 825, 1080, 1665, 2052, 2471
Sau3AI GATC 6 cut(s) 1232, 1471, 1936, 1997, 2236, 2248
Sau96I GGNCC 3 cut(s) 240, 1499, 2227
ScaI AGTACT 3 cut(s) 37, 1396, 1911
SchI GAGTC 3 cut(s) 139, 1328, 2000
ScrFI CCNGG 2 cut(s) 455, 1572
SduI GDGCHC 2 cut(s) 106, 430
SfaNI GCATC 6 cut(s) 1013, 1044, 1096, 1534, 2141, 2638
SfcI CTRYAG 2 cut(s) 1398, 2606
Sfr274I CTCGAG 2 cut(s) 903, 2150
SfuI TTCGAA 1 cut(s) 629
SinI GGWCC 3 cut(s) 240, 1499, 2227
SlaI CTCGAG 2 cut(s) 903, 2150
SmiMI CAYNNNNRTG 2 cut(s) 248, 735
SmlI CTYRAG 4 cut(s) 903, 1465, 1814, 2150
SmoI CTYRAG 4 cut(s) 903, 1465, 1814, 2150
SpeI ACTAGT 1 cut(s) 32
SseBI AGGCCT 1 cut(s) 2557
SsiI CCGC 3 cut(s) 872, 1773, 2466
SstI GAGCTC 1 cut(s) 106
StuI AGGCCT 1 cut(s) 2557
StyD4I CCNGG 2 cut(s) 453, 1570
StyI CCWWGG 7 cut(s) 275, 422, 507, 923, 2046, 2448, 2558
TaaI ACNGT 5 cut(s) 133, 548, 1506, 2762, 2825
TaiI ACGT 4 cut(s) 651, 1350, 1618, 1792
TaqI TCGA 3 cut(s) 629, 904, 2151
TaqII GACCGA 1 cut(s) 2583
TatI WGTACW 4 cut(s) 35, 1394, 1777, 1909
TfiI GAWTC 8 cut(s) 168, 347, 461, 530, 899, 2111, 2563, 2741
Tru1I TTAA 7 cut(s) 447, 468, 815, 1173, 1509, 2124, 2552
Tru9I TTAA 7 cut(s) 447, 468, 815, 1173, 1509, 2124, 2552
TscAI CASTG 5 cut(s) 27, 77, 2378, 2761, 2767
TseFI GTSAC 2 cut(s) 1348, 2756
TseI GCWGC 7 cut(s) 151, 154, 824, 1079, 1664, 2051, 2470
Tsp45I GTSAC 2 cut(s) 1348, 2756
TspGWI ACGGA 3 cut(s) 1269, 1637, 2279
TspRI CASTG 5 cut(s) 27, 77, 2378, 2761, 2767
Tth111I GACNNNGTC 1 cut(s) 1617
Van91I CCANNNNNTGG 1 cut(s) 2064
VpaK11BI GGWCC 3 cut(s) 240, 1499, 2227
VspI ATTAAT 1 cut(s) 468
XapI RAATTY 9 cut(s) 225, 269, 403, 572, 765, 837, 1403, 1417, 1643
XbaI TCTAGA 2 cut(s) 1844, 2482
XceI RCATGY 2 cut(s) 99, 2365
XcmI CCANNNNNNNNNTGG 1 cut(s) 2024
XhoI CTCGAG 2 cut(s) 903, 2150
XmaJI CCTAGG 1 cut(s) 2558
XmnI GAANNNNTTC 1 cut(s) 2312
ZrmI AGTACT 3 cut(s) 37, 1396, 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.