Prupe.7G239100_v2.0.a1

Protein kinase PINOID

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20635951 .. 20637885
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G239100.1

Sequence Viewer

Length: 1482 bp
ATGGCAGCCATAACAACCAGAGATGAATCTGACTATGATAGCAGCTGCTCATCCATAACGGTGCCGGACTCGAGCCGGAGCTGGATGAGCAACCTGAGCTTCAGCAGCCGCCGCCGGAGCTCAGTCTCCGTCTGTTCCTCTGCCACTGAAGCATCTCTGATTTCCTCTGCTCACAAGCCCCACAAGGCTAACCAAGCTGCATGGGAAGCCATGAGGCGGCTCAGGAGCACCAAGGGCCGAGTTGGGCTCGACCATTTTCGGCTCCTGCGCCGTCTCGGCAGCGGTGACATAGGCAACGTTTACCTTTGCCAGATAAGGAACCCTGTGGTGGGTTTGCCTCAGTGCTTTTATGCCATGAAAGTGGTGGACAGAGAAGCACTTGCTATAAGGAAGAAACTGCATAGAGCTGAAATGGAGAAGGAGATTTTGGACATGCTTGATCACCCTTTTCTGCCTACTCTCTATGCTGAGTTTGATGCTTCTCACTATTCTTGCTTGGTTATGGAGTTTTGCCCTGGCGGTGACTTGTATGCCGCTCGACAACGCCTGCCCGGAAAATGCTTTAGCATCTCATCTGCTAGGTTTTACGCGGCAGAGACGCTGTTAGCTCTAGAGTATCTACACATGATGGGGATTGTTTACAGAGACTTGAAGCCTGAAAATGTGCTGGTTAGAGAGGATGGTCACATTATGCTTTCAGATTTTGATCTGTCACTCAAATGCGACGTCGTTCCGAAGTTGCTAAGGCGCAAAATGGACTTAGAATCCAACCAAAAGAATGTAAAGAGCTCCTCAATGCCATACTGTGTTGCAGCCCCCATGCAGCCTGTGCTCTCTTGTTTCTCTGCCTCAAACAAGAAAAAGAAAGGCACAGTCACAACCATAACAGAACAAGTTGGTGCTGATAATAATCATGATAATAATGATGATGATCATCATCAAGAACTTGACCCGGAAATGGTAGCCGAACCGATCGAAGCCCGGTCCAAGTCATTTGTGGGGACACATGAGTACTTAGCACCAGAGGTGATCTCAGGGCAAGGCCATGGAAGTGCAGTGGATTGGTGGACATTTGGGGTGTTCTTGTATGAAATGTTATATGGGAGAACACCTTTCAAAGGTGAAAACAATGAGAAAACCCTCATTAACATTCTTAAGCAGCCATTAAGGTTTCCAAGAGTTGGGGTTAGCAACAGCAAGGAGTTTGAAGAGATGGTCAAAGTTCAAGATCTTATAAGCAAGCTTTTGGTGAAGAATCCCAAGAAGAGAATTGGCAGCTTAAAAGGGTCAGTCGAGATCAAAAGGCATGATTTCTTTAAGGGTGTGAATTGGGCTTTGATTAGGTCTGTTAGGCCTCCTCATGTCCCTGCTGCTAATAGTGATTTGCATAATAAGATTAGAAATAGAGCTTACTTGCCTAAGTTAAGCAAGAAGGAGAGAGATGAACCATTTCAGATCCCTCATCATGTTGATTATTTCTAA

Protein Analysis

494

Amino Acids

55.87

Weight (kDa)

8.96

Isoelectric Point (pI)

50.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014314)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26700
fragaria_vesca FvH4_1g03770
malus_domestica MD02G1036300.v1.1 MD15G1176500.v1.1
prunus_persica Prupe.7G239100_v2.0.a1
pyrus_communis pycom02g02990 pycom15g15810
rosa_chinensis RchiOBHm_Chr2g0089181
rosa_laevigata RLG00000016001
rosa_multiflora Rmu_sc0008909.1_g000007
rosa_roxburghii Rroxscaffold_2G00152180
rosa_rugosa Rorug01G0488100
rosa_samantha Rh2AG043800 Rh2BG042500 Rh2CG043800 Rh2DG042800
rosa_wichuraiana Rw2G003940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1235
AatII GACGTC 1 cut(s) 729
AccB1I GGYRCC 1 cut(s) 61
AccB7I CCANNNNNTGG 1 cut(s) 1181
AccBSI CCGCTC 1 cut(s) 536
AccII CGCG 1 cut(s) 590
AciI CCGC 7 cut(s) 109, 112, 217, 282, 519, 534, 590
AclI AACGTT 1 cut(s) 297
AclWI GGATC 1 cut(s) 1450
AcuI CTGAAG 2 cut(s) 85, 168
AcyI GRCGYC 1 cut(s) 726
AfaI GTAC 1 cut(s) 1013
AfiI CCNNNNNNNGG 6 cut(s) 216, 328, 329, 958, 1118, 1181
AflII CTTAAG 1 cut(s) 1154
AgsI TTSAA 4 cut(s) 652, 1117, 1208, 1226
AjnI CCWGG 1 cut(s) 514
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
Alw21I GWGCWC 4 cut(s) 122, 230, 791, 834
Alw26I GTCTC 4 cut(s) 130, 278, 590, 639
AlwI GGATC 1 cut(s) 1450
Ama87I CYCGRG 1 cut(s) 70
AoxI GGCC 3 cut(s) 235, 1042, 1352
ArsI GACNNNNNNTTYG 2 cut(s) 711, 743
Asp700I GAANNNNTTC 1 cut(s) 1449
AspLEI GCGC 2 cut(s) 270, 750
AspS9I GGNCC 2 cut(s) 235, 984
AsuC2I CCSGG 3 cut(s) 552, 953, 982
AsuHPI GGTGA 6 cut(s) 296, 434, 533, 1039, 1133, 1261
AvaI CYCGRG 1 cut(s) 70
AvaII GGWCC 1 cut(s) 984
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 3 cut(s) 122, 249, 791
Bbv12I GWGCWC 4 cut(s) 122, 230, 791, 834
BccI CCATC 3 cut(s) 622, 674, 1207
BceAI ACGGC 1 cut(s) 255
BciT130I CCWGG 1 cut(s) 516
BclI TGATCA 2 cut(s) 439, 931
BcnI CCSGG 3 cut(s) 552, 953, 982
BcoDI GTCTC 4 cut(s) 130, 278, 590, 639
BfaI CTAG 2 cut(s) 579, 611
BfrI CTTAAG 1 cut(s) 1154
BglI GCCNNNNNGGC 1 cut(s) 276
BglII AGATCT 1 cut(s) 1228
BmcAI AGTACT 1 cut(s) 1013
Bme1390I CCNGG 4 cut(s) 516, 552, 953, 982
Bme18I GGWCC 1 cut(s) 984
BmeT110I CYCGRG 1 cut(s) 70
BmgT120I GGNCC 2 cut(s) 235, 984
BmiI GGNNCC 3 cut(s) 63, 263, 320
BmrFI CCNGG 4 cut(s) 516, 552, 953, 982
BmsI GCATC 3 cut(s) 161, 466, 576
BplI GAGNNNNNCTC 4 cut(s) 231, 263, 1016, 1048
Bpu10I CCTNAGC 3 cut(s) 95, 221, 743
BpuMI CCSGG 3 cut(s) 552, 953, 982
BsaBI GATNNNNATC 5 cut(s) 705, 909, 930, 933, 936
BsaHI GRCGYC 1 cut(s) 726
BsaJI CCNNGG 3 cut(s) 231, 514, 1045
Bsc4I CCNNNNNNNGG 6 cut(s) 216, 328, 329, 958, 1118, 1181
Bse8I GATNNNNATC 5 cut(s) 705, 909, 930, 933, 936
BseBI CCWGG 1 cut(s) 516
BseDI CCNNGG 3 cut(s) 231, 514, 1045
BseGI GGATG 3 cut(s) 50, 90, 685
BseJI GATNNNNATC 5 cut(s) 705, 909, 930, 933, 936
BseLI CCNNNNNNNGG 6 cut(s) 216, 328, 329, 958, 1118, 1181
BseMII CTCAG 6 cut(s) 86, 135, 235, 353, 459, 1047
BseRI GAGGAG 2 cut(s) 781, 1347
BsgI GTGCAG 1 cut(s) 1074
Bsh1236I CGCG 1 cut(s) 590
Bsh1285I CGRYCG 1 cut(s) 975
BshFI GGCC 3 cut(s) 237, 1044, 1354
BshNI GGYRCC 1 cut(s) 61
BsiEI CGRYCG 1 cut(s) 975
BsiHKAI GWGCWC 4 cut(s) 122, 230, 791, 834
BsiHKCI CYCGRG 1 cut(s) 70
BsiSI CCGG 6 cut(s) 65, 76, 115, 552, 953, 982
BslFI GGGAC 2 cut(s) 1015, 1349
BslI CCNNNNNNNGG 6 cut(s) 216, 328, 329, 958, 1118, 1181
BsmAI GTCTC 4 cut(s) 130, 278, 590, 639
BsmBI CGTCTC 2 cut(s) 278, 590
BsmFI GGGAC 2 cut(s) 1015, 1349
BsnI GGCC 3 cut(s) 237, 1044, 1354
BsoBI CYCGRG 1 cut(s) 70
Bsp1286I GDGCHC 5 cut(s) 122, 230, 249, 791, 834
Bsp143I GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
Bsp19I CCATGG 1 cut(s) 1045
BspACI CCGC 7 cut(s) 109, 112, 217, 282, 519, 534, 590
BspANI GGCC 3 cut(s) 237, 1044, 1354
BspCNI CTCAG 6 cut(s) 87, 134, 234, 352, 460, 1046
BspFNI CGCG 1 cut(s) 590
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 3 cut(s) 63, 263, 320
BspPI GGATC 1 cut(s) 1450
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 1154
BsrBI CCGCTC 1 cut(s) 536
BssECI CCNNGG 3 cut(s) 231, 514, 1045
BssMI GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
BssNI GRCGYC 1 cut(s) 726
BssT1I CCWWGG 2 cut(s) 231, 1045
Bst2UI CCWGG 1 cut(s) 516
Bst4CI ACNGT 3 cut(s) 61, 806, 874
Bst6I CTCTTC 2 cut(s) 1203, 1259
BstACI GRCGYC 1 cut(s) 726
BstAFI CTTAAG 1 cut(s) 1154
BstAPI GCANNNNNTGC 1 cut(s) 829
BstC8I GCNNGC 2 cut(s) 548, 1241
BstDSI CCRYGG 1 cut(s) 1045
BstENI CCTNNNNNAGG 1 cut(s) 1116
BstF5I GGATG 3 cut(s) 50, 90, 685
BstFNI CGCG 1 cut(s) 590
BstHHI GCGC 2 cut(s) 270, 750
BstKTI GATC 8 cut(s) 442, 709, 934, 975, 1032, 1231, 1299, 1458
BstMAI GTCTC 4 cut(s) 130, 278, 590, 639
BstMBI GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
BstMCI CGRYCG 1 cut(s) 975
BstNI CCWGG 1 cut(s) 516
BstNSI RCATGY 1 cut(s) 436
BstSCI CCNGG 4 cut(s) 514, 550, 951, 980
BstUI CGCG 1 cut(s) 590
BstX2I RGATCY 2 cut(s) 1228, 1455
BstXI CCANNNNNNTGG 1 cut(s) 361
BstYI RGATCY 2 cut(s) 1228, 1455
BsuRI GGCC 3 cut(s) 237, 1044, 1354
BtgI CCRYGG 1 cut(s) 1045
BtsCI GGATG 3 cut(s) 50, 90, 685
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 3 cut(s) 144, 347, 1062
Cac8I GCNNGC 2 cut(s) 548, 1241
CciI TCATGA 1 cut(s) 913
CfoI GCGC 2 cut(s) 270, 750
Cfr13I GGNCC 2 cut(s) 235, 984
CseI GACGC 1 cut(s) 607
Csp6I GTAC 1 cut(s) 1012
CviQI GTAC 1 cut(s) 1012
DpnI GATC 8 cut(s) 441, 708, 933, 974, 1031, 1230, 1298, 1457
DpnII GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
Eam1104I CTCTTC 2 cut(s) 1203, 1259
EarI CTCTTC 2 cut(s) 1203, 1259
Ecl136II GAGCTC 2 cut(s) 120, 789
Eco130I CCWWGG 2 cut(s) 231, 1045
Eco147I AGGCCT 1 cut(s) 1354
Eco24I GRGCYC 3 cut(s) 122, 249, 791
Eco47I GGWCC 1 cut(s) 984
Eco53kI GAGCTC 2 cut(s) 120, 789
Eco57I CTGAAG 2 cut(s) 85, 168
Eco88I CYCGRG 1 cut(s) 70
EcoICRI GAGCTC 2 cut(s) 120, 789
EcoNI CCTNNNNNAGG 1 cut(s) 1116
EcoRII CCWGG 1 cut(s) 514
EcoT14I CCWWGG 2 cut(s) 231, 1045
EcoT38I GRGCYC 3 cut(s) 122, 249, 791
ErhI CCWWGG 2 cut(s) 231, 1045
Esp3I CGTCTC 2 cut(s) 278, 590
FaqI GGGAC 2 cut(s) 1015, 1349
FbaI TGATCA 2 cut(s) 439, 931
FokI GGATG 3 cut(s) 37, 97, 692
FriOI GRGCYC 3 cut(s) 122, 249, 791
FspBI CTAG 2 cut(s) 579, 611
GlaI GCGC 2 cut(s) 269, 749
HaeIII GGCC 3 cut(s) 237, 1044, 1354
HapII CCGG 6 cut(s) 65, 76, 115, 552, 953, 982
HgaI GACGC 1 cut(s) 607
HhaI GCGC 2 cut(s) 270, 750
Hin1I GRCGYC 1 cut(s) 726
Hin6I GCGC 2 cut(s) 268, 748
HinP1I GCGC 2 cut(s) 268, 748
HindIII AAGCTT 1 cut(s) 1241
HinfI GANTC 4 cut(s) 26, 68, 764, 1255
HpaII CCGG 6 cut(s) 65, 76, 115, 552, 953, 982
HphI GGTGA 6 cut(s) 296, 434, 533, 1039, 1133, 1261
Hpy166II GTNNAC 4 cut(s) 301, 367, 640, 1068
Hpy188I TCNGA 5 cut(s) 31, 159, 700, 735, 1455
Hpy188III TCNNGA 6 cut(s) 223, 611, 914, 941, 1226, 1294
Hpy8I GTNNAC 4 cut(s) 301, 367, 640, 1068
Hpy99I CGWCG 2 cut(s) 728, 731
HpyAV CCTTC 2 cut(s) 412, 1426
HpyCH4III ACNGT 3 cut(s) 61, 806, 874
HpyCH4IV ACGT 2 cut(s) 297, 726
HpyCH4V TGCA 6 cut(s) 200, 400, 812, 823, 1055, 1387
HpySE526I ACGT 2 cut(s) 297, 726
Hsp92I GRCGYC 1 cut(s) 726
HspAI GCGC 2 cut(s) 268, 748
Ksp22I TGATCA 2 cut(s) 439, 931
Kzo9I GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
LmnI GCTCC 5 cut(s) 78, 117, 225, 267, 794
LweI GCATC 3 cut(s) 161, 466, 576
MaeI CTAG 2 cut(s) 579, 611
MaeII ACGT 2 cut(s) 297, 726
MaeIII GTNAC 5 cut(s) 284, 521, 683, 711, 874
MalI GATC 8 cut(s) 441, 708, 933, 974, 1031, 1230, 1298, 1457
MbiI CCGCTC 1 cut(s) 536
MboI GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
MboII GAAGA 4 cut(s) 403, 1220, 1264, 1276
MflI RGATCY 2 cut(s) 1228, 1455
MhlI GDGCHC 5 cut(s) 122, 230, 249, 791, 834
MluCI AATT 2 cut(s) 1269, 1327
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 792
MroXI GAANNNNTTC 1 cut(s) 1449
MseI TTAA 6 cut(s) 1146, 1155, 1166, 1280, 1317, 1424
MslI CAYNNNNRTG 4 cut(s) 59, 359, 718, 1050
MspA1I CMGCKG 2 cut(s) 45, 282
MspCI CTTAAG 1 cut(s) 1154
MspI CCGG 6 cut(s) 65, 76, 115, 552, 953, 982
MspR9I CCNGG 4 cut(s) 516, 552, 953, 982
MvaI CCWGG 1 cut(s) 516
MvnI CGCG 1 cut(s) 590
NciI CCSGG 3 cut(s) 552, 953, 982
NcoI CCATGG 1 cut(s) 1045
NdeII GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
NlaIV GGNNCC 3 cut(s) 63, 263, 320
NmeAIII GCCGAG 2 cut(s) 255, 263
NmuCI GTSAC 5 cut(s) 284, 521, 683, 711, 874
NspI RCATGY 1 cut(s) 436
PaeR7I CTCGAG 1 cut(s) 70
PagI TCATGA 1 cut(s) 913
PceI AGGCCT 1 cut(s) 1354
PdmI GAANNNNTTC 1 cut(s) 1449
PfeI GAWTC 3 cut(s) 26, 764, 1255
PflMI CCANNNNNTGG 1 cut(s) 1181
Ple19I CGATCG 1 cut(s) 975
PleI GAGTC 1 cut(s) 62
PpsI GAGTC 1 cut(s) 62
PsiI TTATAA 1 cut(s) 1235
Psp124BI GAGCTC 2 cut(s) 122, 791
Psp1406I AACGTT 1 cut(s) 297
Psp6I CCWGG 1 cut(s) 514
PspGI CCWGG 1 cut(s) 514
PspN4I GGNNCC 3 cut(s) 63, 263, 320
PspPI GGNCC 2 cut(s) 235, 984
PspXI VCTCGAGB 1 cut(s) 70
PsuI RGATCY 2 cut(s) 1228, 1455
PvuI CGATCG 1 cut(s) 975
PvuII CAGCTG 1 cut(s) 45
RsaI GTAC 1 cut(s) 1013
RsaNI GTAC 1 cut(s) 1012
RseI CAYNNNNRTG 4 cut(s) 59, 359, 718, 1050
SacI GAGCTC 2 cut(s) 122, 791
SaqAI TTAA 6 cut(s) 1146, 1155, 1166, 1280, 1317, 1424
Sau3AI GATC 8 cut(s) 439, 706, 931, 972, 1029, 1228, 1296, 1455
Sau96I GGNCC 2 cut(s) 235, 984
ScaI AGTACT 1 cut(s) 1013
SchI GAGTC 1 cut(s) 62
ScrFI CCNGG 4 cut(s) 516, 552, 953, 982
SduI GDGCHC 5 cut(s) 122, 230, 249, 791, 834
SfaNI GCATC 3 cut(s) 161, 466, 576
Sfr274I CTCGAG 1 cut(s) 70
SinI GGWCC 1 cut(s) 984
SlaI CTCGAG 1 cut(s) 70
SmiMI CAYNNNNRTG 4 cut(s) 59, 359, 718, 1050
SmlI CTYRAG 2 cut(s) 70, 1154
SmoI CTYRAG 2 cut(s) 70, 1154
Sse9I AATT 2 cut(s) 1269, 1327
SseBI AGGCCT 1 cut(s) 1354
SsiI CCGC 7 cut(s) 109, 112, 217, 282, 519, 534, 590
SspMI CTAG 2 cut(s) 579, 611
SstI GAGCTC 2 cut(s) 122, 791
StuI AGGCCT 1 cut(s) 1354
StyD4I CCNGG 4 cut(s) 514, 550, 951, 980
StyI CCWWGG 2 cut(s) 231, 1045
TaaI ACNGT 3 cut(s) 61, 806, 874
TaiI ACGT 2 cut(s) 300, 729
TaqI TCGA 5 cut(s) 71, 249, 538, 975, 1293
TasI AATT 2 cut(s) 1269, 1327
TatI WGTACW 1 cut(s) 1011
TauI GCSGC 5 cut(s) 111, 114, 220, 536, 593
TfiI GAWTC 3 cut(s) 26, 764, 1255
Tru1I TTAA 6 cut(s) 1146, 1155, 1166, 1280, 1317, 1424
Tru9I TTAA 6 cut(s) 1146, 1155, 1166, 1280, 1317, 1424
TscAI CASTG 3 cut(s) 151, 347, 1062
TseFI GTSAC 5 cut(s) 284, 521, 683, 711, 874
Tsp45I GTSAC 5 cut(s) 284, 521, 683, 711, 874
TspDTI ATGAA 4 cut(s) 39, 371, 1104, 1458
TspGWI ACGGA 1 cut(s) 118
TspRI CASTG 3 cut(s) 151, 347, 1062
Van91I CCANNNNNTGG 1 cut(s) 1181
Vha464I CTTAAG 1 cut(s) 1154
VpaK11BI GGWCC 1 cut(s) 984
XagI CCTNNNNNAGG 1 cut(s) 1116
XbaI TCTAGA 1 cut(s) 610
XceI RCATGY 1 cut(s) 436
XcmI CCANNNNNNNNNTGG 2 cut(s) 361, 994
XhoI CTCGAG 1 cut(s) 70
XmnI GAANNNNTTC 1 cut(s) 1449
XspI CTAG 2 cut(s) 579, 611
ZraI GACGTC 1 cut(s) 727
ZrmI AGTACT 1 cut(s) 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.