Protein kinase PINOID
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26700 |
| fragaria_vesca | FvH4_1g03770 |
| malus_domestica | MD02G1036300.v1.1 MD15G1176500.v1.1 |
| prunus_persica | Prupe.7G239100_v2.0.a1 |
| pyrus_communis | pycom02g02990 pycom15g15810 |
| rosa_chinensis | RchiOBHm_Chr2g0089181 |
| rosa_laevigata | RLG00000016001 |
| rosa_multiflora | Rmu_sc0008909.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00152180 |
| rosa_rugosa | Rorug01G0488100 |
| rosa_samantha | Rh2AG043800 Rh2BG042500 Rh2CG043800 Rh2DG042800 |
| rosa_wichuraiana | Rw2G003940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1286 |
| AatII | GACGTC | 1 cut(s) | 750 |
| AccB1I | GGYRCC | 1 cut(s) | 111 |
| AccIII | TCCGGA | 2 cut(s) | 225, 976 |
| AclWI | GGATC | 2 cut(s) | 968, 1510 |
| AcoI | YGGCCR | 1 cut(s) | 1266 |
| AcsI | RAATTY | 1 cut(s) | 527 |
| AcuI | CTGAAG | 2 cut(s) | 85, 568 |
| AcyI | GRCGYC | 2 cut(s) | 112, 747 |
| AfaI | GTAC | 4 cut(s) | 19, 305, 969, 1037 |
| AfeI | AGCGCT | 1 cut(s) | 581 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 219, 342, 1142 |
| AflII | CTTAAG | 1 cut(s) | 1178 |
| AflIII | ACRYGT | 1 cut(s) | 916 |
| AgsI | TTSAA | 4 cut(s) | 497, 673, 1141, 1333 |
| AhlI | ACTAGT | 1 cut(s) | 1451 |
| Alw21I | GWGCWC | 3 cut(s) | 122, 233, 815 |
| Alw26I | GTCTC | 4 cut(s) | 130, 254, 611, 738 |
| AlwI | GGATC | 2 cut(s) | 968, 1510 |
| Ama87I | CYCGRG | 1 cut(s) | 632 |
| Aor13HI | TCCGGA | 2 cut(s) | 225, 976 |
| Aor51HI | AGCGCT | 1 cut(s) | 581 |
| AoxI | GGCC | 5 cut(s) | 153, 238, 1066, 1266, 1403 |
| ApoI | RAATTY | 1 cut(s) | 527 |
| AspLEI | GCGC | 2 cut(s) | 114, 582 |
| AspS9I | GGNCC | 1 cut(s) | 1008 |
| AsuC2I | CCSGG | 3 cut(s) | 537, 573, 1006 |
| AsuHPI | GGTGA | 5 cut(s) | 554, 935, 1063, 1157, 1312 |
| AsuNHI | GCTAGC | 1 cut(s) | 1421 |
| AvaI | CYCGRG | 1 cut(s) | 632 |
| AvaII | GGWCC | 1 cut(s) | 1008 |
| BalI | TGGCCA | 1 cut(s) | 1268 |
| BanI | GGYRCC | 1 cut(s) | 111 |
| BanII | GRGCYC | 3 cut(s) | 122, 233, 815 |
| BauI | CACGAG | 1 cut(s) | 1031 |
| Bbv12I | GWGCWC | 3 cut(s) | 122, 233, 815 |
| BbvCI | CCTCAGC | 2 cut(s) | 95, 764 |
| BccI | CCATC | 2 cut(s) | 643, 832 |
| BceAI | ACGGC | 1 cut(s) | 60 |
| BclI | TGATCA | 3 cut(s) | 934, 946, 1429 |
| BcnI | CCSGG | 3 cut(s) | 537, 573, 1006 |
| BcoDI | GTCTC | 4 cut(s) | 130, 254, 611, 738 |
| BcuI | ACTAGT | 1 cut(s) | 1451 |
| BfaI | CTAG | 7 cut(s) | 72, 600, 626, 689, 1205, 1422, 1452 |
| BfmI | CTRYAG | 1 cut(s) | 612 |
| BfoI | RGCGCY | 2 cut(s) | 115, 583 |
| BfrI | CTTAAG | 1 cut(s) | 1178 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 279 |
| BlpI | GCTNAGC | 1 cut(s) | 169 |
| BmcAI | AGTACT | 3 cut(s) | 19, 969, 1037 |
| Bme1390I | CCNGG | 3 cut(s) | 537, 573, 1006 |
| Bme18I | GGWCC | 1 cut(s) | 1008 |
| BmeT110I | CYCGRG | 1 cut(s) | 632 |
| BmgT120I | GGNCC | 1 cut(s) | 1008 |
| BmiI | GGNNCC | 5 cut(s) | 113, 224, 266, 323, 993 |
| BmrFI | CCNGG | 3 cut(s) | 537, 573, 1006 |
| BmtI | GCTAGC | 1 cut(s) | 1425 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 234, 266, 1040, 1072 |
| Bpu10I | CCTNAGC | 3 cut(s) | 95, 351, 764 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 169 |
| BpuEI | CTTGAG | 1 cut(s) | 1395 |
| BpuMI | CCSGG | 3 cut(s) | 537, 573, 1006 |
| BsaBI | GATNNNNATC | 2 cut(s) | 726, 945 |
| BsaHI | GRCGYC | 2 cut(s) | 112, 747 |
| BsaI | GGTCTC | 1 cut(s) | 254 |
| BsaJI | CCNNGG | 4 cut(s) | 277, 336, 535, 1069 |
| BsaWI | WCCGGW | 3 cut(s) | 225, 976, 1045 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 219, 342, 1142 |
| Bse118I | RCCGGY | 1 cut(s) | 108 |
| Bse8I | GATNNNNATC | 2 cut(s) | 726, 945 |
| BseAI | TCCGGA | 2 cut(s) | 225, 976 |
| BseDI | CCNNGG | 4 cut(s) | 277, 336, 535, 1069 |
| BseGI | GGATG | 3 cut(s) | 26, 90, 1507 |
| BseJI | GATNNNNATC | 2 cut(s) | 726, 945 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 219, 342, 1142 |
| BseMII | CTCAG | 6 cut(s) | 109, 141, 178, 183, 755, 1071 |
| BseRI | GAGGAG | 2 cut(s) | 257, 1398 |
| BsgI | GTGCAG | 2 cut(s) | 852, 1098 |
| BshFI | GGCC | 5 cut(s) | 155, 240, 1068, 1268, 1405 |
| BshNI | GGYRCC | 1 cut(s) | 111 |
| BsiHKAI | GWGCWC | 3 cut(s) | 122, 233, 815 |
| BsiHKCI | CYCGRG | 1 cut(s) | 632 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 219, 342, 1142 |
| BsmAI | GTCTC | 4 cut(s) | 130, 254, 611, 738 |
| BsmBI | CGTCTC | 1 cut(s) | 130 |
| BsnI | GGCC | 5 cut(s) | 155, 240, 1068, 1268, 1405 |
| Bso31I | GGTCTC | 1 cut(s) | 254 |
| BsoBI | CYCGRG | 1 cut(s) | 632 |
| Bsp1286I | GDGCHC | 3 cut(s) | 122, 233, 815 |
| Bsp13I | TCCGGA | 2 cut(s) | 225, 976 |
| Bsp143I | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 169 |
| Bsp19I | CCATGG | 1 cut(s) | 1069 |
| BspANI | GGCC | 5 cut(s) | 155, 240, 1068, 1268, 1405 |
| BspCNI | CTCAG | 6 cut(s) | 108, 142, 177, 182, 756, 1070 |
| BspEI | TCCGGA | 2 cut(s) | 225, 976 |
| BspHI | TCATGA | 1 cut(s) | 937 |
| BspLI | GGNNCC | 5 cut(s) | 113, 224, 266, 323, 993 |
| BspMAI | CTGCAG | 1 cut(s) | 616 |
| BspOI | GCTAGC | 1 cut(s) | 1425 |
| BspPI | GGATC | 2 cut(s) | 968, 1510 |
| BspQI | GCTCTTC | 1 cut(s) | 52 |
| BspT107I | GGYRCC | 1 cut(s) | 111 |
| BspTI | CTTAAG | 1 cut(s) | 1178 |
| BspTNI | GGTCTC | 1 cut(s) | 254 |
| BsrFI | RCCGGY | 1 cut(s) | 108 |
| BssAI | RCCGGY | 1 cut(s) | 108 |
| BssECI | CCNNGG | 4 cut(s) | 277, 336, 535, 1069 |
| BssMI | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| BssNI | GRCGYC | 2 cut(s) | 112, 747 |
| BssSI | CACGAG | 1 cut(s) | 1031 |
| BssT1I | CCWWGG | 2 cut(s) | 336, 1069 |
| Bst2BI | CACGAG | 1 cut(s) | 1031 |
| Bst4CI | ACNGT | 3 cut(s) | 41, 704, 898 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 1310 |
| BstACI | GRCGYC | 2 cut(s) | 112, 747 |
| BstAFI | CTTAAG | 1 cut(s) | 1178 |
| BstC8I | GCNNGC | 4 cut(s) | 110, 569, 1292, 1423 |
| BstDSI | CCRYGG | 1 cut(s) | 1069 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| BstF5I | GGATG | 3 cut(s) | 26, 90, 1507 |
| BstH2I | RGCGCY | 2 cut(s) | 115, 583 |
| BstHHI | GCGC | 2 cut(s) | 114, 582 |
| BstKTI | GATC | 9 cut(s) | 730, 937, 949, 976, 1056, 1350, 1397, 1432, 1518 |
| BstMAI | GTCTC | 4 cut(s) | 130, 254, 611, 738 |
| BstMBI | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| BstNSI | RCATGY | 2 cut(s) | 457, 920 |
| BstSCI | CCNGG | 3 cut(s) | 535, 571, 1004 |
| BstSFI | CTRYAG | 1 cut(s) | 612 |
| BstX2I | RGATCY | 1 cut(s) | 1515 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 382 |
| BstYI | RGATCY | 1 cut(s) | 1515 |
| BsuRI | GGCC | 5 cut(s) | 155, 240, 1068, 1268, 1405 |
| BtgI | CCRYGG | 1 cut(s) | 1069 |
| BtsCI | GGATG | 3 cut(s) | 26, 90, 1507 |
| BtsI | GCAGTG | 1 cut(s) | 368 |
| BtsIMutI | CAGTG | 2 cut(s) | 368, 792 |
| Cac8I | GCNNGC | 4 cut(s) | 110, 569, 1292, 1423 |
| CciI | TCATGA | 1 cut(s) | 937 |
| CfoI | GCGC | 2 cut(s) | 114, 582 |
| Cfr10I | RCCGGY | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 1008 |
| Csp6I | GTAC | 4 cut(s) | 18, 304, 968, 1036 |
| CviQI | GTAC | 4 cut(s) | 18, 304, 968, 1036 |
| DinI | GGCGCC | 1 cut(s) | 113 |
| DpnI | GATC | 9 cut(s) | 729, 936, 948, 975, 1055, 1349, 1396, 1431, 1517 |
| DpnII | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| EaeI | YGGCCR | 1 cut(s) | 1266 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 1310 |
| EarI | CTCTTC | 2 cut(s) | 52, 1310 |
| EciI | GGCGGA | 2 cut(s) | 130, 260 |
| Ecl136II | GAGCTC | 3 cut(s) | 120, 231, 813 |
| Eco130I | CCWWGG | 2 cut(s) | 336, 1069 |
| Eco147I | AGGCCT | 2 cut(s) | 155, 1405 |
| Eco24I | GRGCYC | 3 cut(s) | 122, 233, 815 |
| Eco31I | GGTCTC | 1 cut(s) | 254 |
| Eco47I | GGWCC | 1 cut(s) | 1008 |
| Eco47III | AGCGCT | 1 cut(s) | 581 |
| Eco53kI | GAGCTC | 3 cut(s) | 120, 231, 813 |
| Eco57I | CTGAAG | 2 cut(s) | 85, 568 |
| Eco88I | CYCGRG | 1 cut(s) | 632 |
| EcoICRI | GAGCTC | 3 cut(s) | 120, 231, 813 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| EcoT14I | CCWWGG | 2 cut(s) | 336, 1069 |
| EcoT38I | GRGCYC | 3 cut(s) | 122, 233, 815 |
| EgeI | GGCGCC | 1 cut(s) | 113 |
| EheI | GGCGCC | 1 cut(s) | 113 |
| ErhI | CCWWGG | 2 cut(s) | 336, 1069 |
| Esp3I | CGTCTC | 1 cut(s) | 130 |
| FauI | CCCGC | 1 cut(s) | 334 |
| FauNDI | CATATG | 1 cut(s) | 645 |
| FbaI | TGATCA | 3 cut(s) | 934, 946, 1429 |
| FokI | GGATG | 3 cut(s) | 13, 97, 1514 |
| FriOI | GRGCYC | 3 cut(s) | 122, 233, 815 |
| FspBI | CTAG | 7 cut(s) | 72, 600, 626, 689, 1205, 1422, 1452 |
| GlaI | GCGC | 2 cut(s) | 113, 581 |
| HaeII | RGCGCY | 2 cut(s) | 115, 583 |
| HaeIII | GGCC | 5 cut(s) | 155, 240, 1068, 1268, 1405 |
| HhaI | GCGC | 2 cut(s) | 114, 582 |
| Hin1I | GRCGYC | 2 cut(s) | 112, 747 |
| Hin6I | GCGC | 2 cut(s) | 112, 580 |
| HinP1I | GCGC | 2 cut(s) | 112, 580 |
| HincII | GTYRAC | 1 cut(s) | 563 |
| HindII | GTYRAC | 1 cut(s) | 563 |
| HindIII | AAGCTT | 3 cut(s) | 498, 1292, 1327 |
| HinfI | GANTC | 4 cut(s) | 23, 68, 785, 1306 |
| HphI | GGTGA | 5 cut(s) | 554, 935, 1063, 1157, 1312 |
| Hpy166II | GTNNAC | 5 cut(s) | 304, 388, 563, 661, 1092 |
| Hpy188I | TCNGA | 3 cut(s) | 31, 151, 721 |
| Hpy188III | TCNNGA | 6 cut(s) | 226, 251, 632, 938, 977, 1059 |
| Hpy8I | GTNNAC | 5 cut(s) | 304, 388, 563, 661, 1092 |
| Hpy99I | CGWCG | 2 cut(s) | 749, 752 |
| HpyAV | CCTTC | 2 cut(s) | 433, 1327 |
| HpyCH4III | ACNGT | 3 cut(s) | 41, 704, 898 |
| HpyCH4IV | ACGT | 1 cut(s) | 747 |
| HpySE526I | ACGT | 1 cut(s) | 747 |
| Hsp92I | GRCGYC | 2 cut(s) | 112, 747 |
| HspAI | GCGC | 2 cut(s) | 112, 580 |
| KasI | GGCGCC | 1 cut(s) | 111 |
| Kpn2I | TCCGGA | 2 cut(s) | 225, 976 |
| KroI | GCCGGC | 1 cut(s) | 108 |
| KroNI | GCCGGC | 1 cut(s) | 110 |
| Ksp22I | TGATCA | 3 cut(s) | 934, 946, 1429 |
| Kzo9I | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| LguI | GCTCTTC | 1 cut(s) | 52 |
| LmnI | GCTCC | 8 cut(s) | 117, 125, 228, 228, 236, 270, 841, 991 |
| MaeI | CTAG | 7 cut(s) | 72, 600, 626, 689, 1205, 1422, 1452 |
| MaeII | ACGT | 1 cut(s) | 747 |
| MaeIII | GTNAC | 4 cut(s) | 542, 704, 898, 1225 |
| MalI | GATC | 9 cut(s) | 729, 936, 948, 975, 1055, 1349, 1396, 1431, 1517 |
| MboI | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| MboII | GAAGA | 3 cut(s) | 39, 1315, 1327 |
| MflI | RGATCY | 1 cut(s) | 1515 |
| MhlI | GDGCHC | 3 cut(s) | 122, 233, 815 |
| MlsI | TGGCCA | 1 cut(s) | 1268 |
| MluCI | AATT | 7 cut(s) | 416, 527, 773, 962, 980, 1378, 1468 |
| MluNI | TGGCCA | 1 cut(s) | 1268 |
| Mly113I | GGCGCC | 1 cut(s) | 112 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MmeI | TCCRAC | 3 cut(s) | 54, 813, 1003 |
| Mox20I | TGGCCA | 1 cut(s) | 1268 |
| MroI | TCCGGA | 2 cut(s) | 225, 976 |
| MroNI | GCCGGC | 1 cut(s) | 108 |
| MscI | TGGCCA | 1 cut(s) | 1268 |
| MseI | TTAA | 5 cut(s) | 738, 957, 1179, 1212, 1368 |
| MslI | CAYNNNNRTG | 5 cut(s) | 59, 380, 921, 942, 1074 |
| Msp20I | TGGCCA | 1 cut(s) | 1268 |
| MspA1I | CMGCKG | 2 cut(s) | 285, 329 |
| MspCI | CTTAAG | 1 cut(s) | 1178 |
| MspR9I | CCNGG | 3 cut(s) | 537, 573, 1006 |
| NaeI | GCCGGC | 1 cut(s) | 110 |
| NarI | GGCGCC | 1 cut(s) | 112 |
| NciI | CCSGG | 3 cut(s) | 537, 573, 1006 |
| NcoI | CCATGG | 1 cut(s) | 1069 |
| NdeI | CATATG | 1 cut(s) | 645 |
| NdeII | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| NgoMIV | GCCGGC | 1 cut(s) | 108 |
| NheI | GCTAGC | 1 cut(s) | 1421 |
| NlaIV | GGNNCC | 5 cut(s) | 113, 224, 266, 323, 993 |
| NmeAIII | GCCGAG | 2 cut(s) | 258, 266 |
| NmuCI | GTSAC | 3 cut(s) | 542, 704, 898 |
| NspI | RCATGY | 2 cut(s) | 457, 920 |
| PaeR7I | CTCGAG | 1 cut(s) | 632 |
| PagI | TCATGA | 1 cut(s) | 937 |
| PceI | AGGCCT | 2 cut(s) | 155, 1405 |
| PciI | ACATGT | 1 cut(s) | 916 |
| PciSI | GCTCTTC | 1 cut(s) | 52 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 285 |
| PdiI | GCCGGC | 1 cut(s) | 110 |
| PfeI | GAWTC | 3 cut(s) | 23, 785, 1306 |
| PleI | GAGTC | 1 cut(s) | 62 |
| PluTI | GGCGCC | 1 cut(s) | 115 |
| PpsI | GAGTC | 1 cut(s) | 62 |
| PscI | ACATGT | 1 cut(s) | 916 |
| PsiI | TTATAA | 1 cut(s) | 1286 |
| Psp124BI | GAGCTC | 3 cut(s) | 122, 233, 815 |
| PspN4I | GGNNCC | 5 cut(s) | 113, 224, 266, 323, 993 |
| PspPI | GGNCC | 1 cut(s) | 1008 |
| PstI | CTGCAG | 1 cut(s) | 616 |
| PsuI | RGATCY | 1 cut(s) | 1515 |
| RsaI | GTAC | 4 cut(s) | 19, 305, 969, 1037 |
| RsaNI | GTAC | 4 cut(s) | 18, 304, 968, 1036 |
| RseI | CAYNNNNRTG | 5 cut(s) | 59, 380, 921, 942, 1074 |
| SacI | GAGCTC | 3 cut(s) | 122, 233, 815 |
| SapI | GCTCTTC | 1 cut(s) | 52 |
| SaqAI | TTAA | 5 cut(s) | 738, 957, 1179, 1212, 1368 |
| Sau3AI | GATC | 9 cut(s) | 727, 934, 946, 973, 1053, 1347, 1394, 1429, 1515 |
| Sau96I | GGNCC | 1 cut(s) | 1008 |
| ScaI | AGTACT | 3 cut(s) | 19, 969, 1037 |
| SchI | GAGTC | 1 cut(s) | 62 |
| ScrFI | CCNGG | 3 cut(s) | 537, 573, 1006 |
| SduI | GDGCHC | 3 cut(s) | 122, 233, 815 |
| SfcI | CTRYAG | 1 cut(s) | 612 |
| SfoI | GGCGCC | 1 cut(s) | 113 |
| Sfr274I | CTCGAG | 1 cut(s) | 632 |
| SinI | GGWCC | 1 cut(s) | 1008 |
| SlaI | CTCGAG | 1 cut(s) | 632 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 59, 380, 921, 942, 1074 |
| SmlI | CTYRAG | 3 cut(s) | 632, 1178, 1410 |
| SmoI | CTYRAG | 3 cut(s) | 632, 1178, 1410 |
| SpeI | ACTAGT | 1 cut(s) | 1451 |
| Sse9I | AATT | 7 cut(s) | 416, 527, 773, 962, 980, 1378, 1468 |
| SseBI | AGGCCT | 2 cut(s) | 155, 1405 |
| SspDI | GGCGCC | 1 cut(s) | 111 |
| SspI | AATATT | 1 cut(s) | 1174 |
| SspMI | CTAG | 7 cut(s) | 72, 600, 626, 689, 1205, 1422, 1452 |
| SstI | GAGCTC | 3 cut(s) | 122, 233, 815 |
| StuI | AGGCCT | 2 cut(s) | 155, 1405 |
| StyD4I | CCNGG | 3 cut(s) | 535, 571, 1004 |
| StyI | CCWWGG | 2 cut(s) | 336, 1069 |
| TaaI | ACNGT | 3 cut(s) | 41, 704, 898 |
| TaiI | ACGT | 1 cut(s) | 750 |
| TaqI | TCGA | 3 cut(s) | 252, 633, 726 |
| TasI | AATT | 7 cut(s) | 416, 527, 773, 962, 980, 1378, 1468 |
| TatI | WGTACW | 3 cut(s) | 17, 967, 1035 |
| TauI | GCSGC | 5 cut(s) | 223, 276, 288, 335, 361 |
| TfiI | GAWTC | 3 cut(s) | 23, 785, 1306 |
| Tru1I | TTAA | 5 cut(s) | 738, 957, 1179, 1212, 1368 |
| Tru9I | TTAA | 5 cut(s) | 738, 957, 1179, 1212, 1368 |
| TscAI | CASTG | 2 cut(s) | 368, 799 |
| TseFI | GTSAC | 3 cut(s) | 542, 704, 898 |
| Tsp45I | GTSAC | 3 cut(s) | 542, 704, 898 |
| TspDTI | ATGAA | 3 cut(s) | 392, 1128, 1518 |
| TspGWI | ACGGA | 2 cut(s) | 112, 118 |
| TspRI | CASTG | 2 cut(s) | 368, 799 |
| Vha464I | CTTAAG | 1 cut(s) | 1178 |
| VpaK11BI | GGWCC | 1 cut(s) | 1008 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1140 |
| XapI | RAATTY | 1 cut(s) | 527 |
| XceI | RCATGY | 2 cut(s) | 457, 920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 382 |
| XhoI | CTCGAG | 1 cut(s) | 632 |
| XspI | CTAG | 7 cut(s) | 72, 600, 626, 689, 1205, 1422, 1452 |
| ZraI | GACGTC | 1 cut(s) | 748 |
| ZrmI | AGTACT | 3 cut(s) | 19, 969, 1037 |