Prupe.7G262000_v2.0.a1

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0015261
Physical Location & Seq
Reverse (-)
21758784 .. 21761076
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G262000.1

Sequence Viewer

Length: 1326 bp
ATGGGAATTCAGAAAGACAGGGTGAGGTTCAATGTTGGAGGCAGAATCTTTGAAACAACCGCCACAACTCTCGCCAATGCCGGCCGTAATTCCATGTTTGGAGCGATGTTTGACGAGAACTGGAATCTGCAATCCGATAATTCCAATGAATACTTCATTGATCGCAACCCGGATTGCTTTGCGGTCCTCCTTGATCTTCTAAGAACCCAAGAGCTTCATATCCGAGCCAATATGTCTGAAAAGCTTCTTTATAGAGAGGCTTTGTATTATGGCCTTCTCGACCACGTTCGATCAGCCAAATGGGGTCCCTTTGATGGCAACAGGTTGTGGCTTTCGAAGACAGTAGCAGGCCAAGCTCCGGGTGATGGCACAGCAATTCGTGCTGGCCCCGATGGTGGTTGCTGCGTTGCTCATGGTTGCATGGTCCATGTCTACGACTGGATGCTAGATGAGCACCCTCCAATCAATCTTGATTATCAGAGAGTCAATGATGTTGGTTGGGTTGATTCGGAGAACATAGTGATCAGCGTTTGCGAGCGGTTAGGCCGAGGAGACGGAGGAATGGGGCTGTTCAGCTCATCAAATGGGGAGCTCAGGTACAAATTTCAAGTTAGTCATGAGAATCAAGTTAAGAGCTTTACTGCTGGAGCTTTGTGTTTTGGGTCAGATTACAAGATATTCTCTAGTTGCAAAGGTAGGAGCAATGAGTATGGCGTTGGTGTTTGGGACCAAATAACAGGAAAGCAGACTGATTTTTTCTATGAACCATCTGGTTGGTCACTTGGTGATGCTGACAAGCTGCAATGGTTGCAGGGGAGCAACTGTCTGTTAGTTGCAACCTTGTTCCCTAGGAAAGACAACTGTTACATCAGTTTGTTGGACTTGAGGGAGAAGAAAATGGTCTGGTCTTGGTCTGATATTGGAGCTCCTATAACTGTGGATGAGAAGAGGGTCAGAGATGCAATAGCAATGGAGGAGAGTAACTCCATTTGTGTGGTAAATGAGTATGAGGATTTGGGTTTTATTGATCTCAGGAGCTCTGGTGGAAGTGTTAGATGGAGCTCAAGGAGCAGGCTGATGAAGGGAAAAATGCCTGATGAGCCTTGCTACCCCAAACTGGCATTGCATGAGGGGCAACTCTTTTCATCCATGAATGATTCCATTTCAGTGTTCTGTGGTCCTGATTGGGTTTTAACGTCCAGGCTTCGACGAAGTTATGGAGGTTCAATCTGCGATTTTTCGATAGGTGGGGATCGGCTTTTTGCACTTCATAGCGAGGAAAATGTGTTTGATATATGGGAGACTCCACCTCCTCCAATTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB_2

Protein Analysis

442

Amino Acids

49.53

Weight (kDa)

5.18

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015261)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24240 AT4G30940
fragaria_vesca FvH4_1g01020
malus_domestica MD15G1152600.v1.1
prunus_persica Prupe.7G262000_v2.0.a1
pyrus_communis pycom15g13720
rosa_chinensis RchiOBHm_Chr2g0085761
rosa_laevigata RLG00000015717
rosa_multiflora Rmu_co8412055.1_g000001 Rmu_sc0009759.1_g000003
rosa_roxburghii Rroxscaffold_2G00155060
rosa_rugosa Rorug01G0463000 Rorug01G0463000
rosa_samantha Rh2BG012800 Rh2CG013500
rosa_wichuraiana Rw2G001080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 538
AccI GTMKAC 1 cut(s) 432
AciI CCGC 3 cut(s) 60, 182, 538
AclWI GGATC 1 cut(s) 1260
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 2 cut(s) 6, 602
AdeI CACNNNGTG 1 cut(s) 785
AfaI GTAC 1 cut(s) 599
AfiI CCNNNNNNNGG 5 cut(s) 314, 358, 365, 395, 1117
AgsI TTSAA 4 cut(s) 31, 53, 608, 1227
AjnI CCWGG 1 cut(s) 1199
AjuI GAANNNNNNNTTGG 2 cut(s) 137, 169
Alw21I GWGCWC 5 cut(s) 456, 594, 928, 1040, 1064
Alw26I GTCTC 2 cut(s) 546, 1295
AlwI GGATC 1 cut(s) 1260
AoxI GGCC 5 cut(s) 82, 271, 349, 385, 544
ApeKI GCWGC 2 cut(s) 402, 799
ApoI RAATTY 2 cut(s) 6, 602
Asp700I GAANNNNTTC 1 cut(s) 243
AspA2I CCTAGG 1 cut(s) 848
AspS9I GGNCC 6 cut(s) 184, 305, 386, 424, 727, 1178
AsuC2I CCSGG 2 cut(s) 170, 360
AsuHPI GGTGA 3 cut(s) 34, 374, 797
AsuII TTCGAA 1 cut(s) 335
AvaII GGWCC 5 cut(s) 184, 305, 424, 727, 1178
AvrII CCTAGG 1 cut(s) 848
BanII GRGCYC 4 cut(s) 594, 928, 1040, 1064
BbsI GAAGAC 1 cut(s) 344
Bbv12I GWGCWC 5 cut(s) 456, 594, 928, 1040, 1064
BbvI GCAGC 2 cut(s) 389, 786
BccI CCATC 5 cut(s) 308, 359, 386, 775, 1050
BceAI ACGGC 1 cut(s) 69
BciT130I CCWGG 1 cut(s) 1201
BclI TGATCA 1 cut(s) 522
BcnI CCSGG 2 cut(s) 170, 360
BcoDI GTCTC 2 cut(s) 546, 1295
BfaI CTAG 3 cut(s) 446, 684, 849
BisI GCNGC 2 cut(s) 403, 800
BlnI CCTAGG 1 cut(s) 848
BlsI GCNGC 2 cut(s) 404, 801
Bme1390I CCNGG 3 cut(s) 170, 360, 1201
Bme18I GGWCC 5 cut(s) 184, 305, 424, 727, 1178
BmgT120I GGNCC 6 cut(s) 184, 305, 386, 424, 727, 1178
BmiI GGNNCC 4 cut(s) 306, 307, 388, 728
BmrFI CCNGG 3 cut(s) 170, 360, 1201
BmsI GCATC 3 cut(s) 432, 778, 949
BpiI GAAGAC 1 cut(s) 344
BplI GAGNNNNNCTC 2 cut(s) 968, 1000
BpmI CTGGAG 1 cut(s) 666
Bpu10I CCTNAGC 1 cut(s) 593
Bpu14I TTCGAA 1 cut(s) 335
BpuEI CTTGAG 2 cut(s) 904, 1048
BpuMI CCSGG 2 cut(s) 170, 360
BsaJI CCNNGG 2 cut(s) 547, 848
BsaXI ACNNNNNCTCC 8 cut(s) 581, 611, 808, 838, 1027, 1057, 1294, 1324
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 358, 365, 395, 1117
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 3 cut(s) 125, 443, 1122
Bse3DI GCAATG 4 cut(s) 709, 809, 975, 1121
BseBI CCWGG 1 cut(s) 1201
BseDI CCNNGG 2 cut(s) 547, 848
BseGI GGATG 3 cut(s) 447, 946, 1145
BseLI CCNNNNNNNGG 5 cut(s) 314, 358, 365, 395, 1117
BseMI GCAATG 4 cut(s) 709, 809, 975, 1121
BseMII CTCAG 2 cut(s) 607, 1045
BseNI ACTGG 3 cut(s) 125, 443, 1122
BseRI GAGGAG 3 cut(s) 564, 989, 1302
BseX3I CGGCCG 1 cut(s) 82
BseXI GCAGC 2 cut(s) 389, 786
Bsh1285I CGRYCG 1 cut(s) 85
BshFI GGCC 5 cut(s) 84, 273, 351, 387, 546
BsiEI CGRYCG 1 cut(s) 85
BsiHKAI GWGCWC 5 cut(s) 456, 594, 928, 1040, 1064
BsiSI CCGG 3 cut(s) 81, 170, 359
BslFI GGGAC 2 cut(s) 291, 740
BslI CCNNNNNNNGG 5 cut(s) 314, 358, 365, 395, 1117
BsmAI GTCTC 2 cut(s) 546, 1295
BsmBI CGTCTC 1 cut(s) 546
BsmFI GGGAC 2 cut(s) 291, 740
BsnI GGCC 5 cut(s) 84, 273, 351, 387, 546
Bsp119I TTCGAA 1 cut(s) 335
Bsp1286I GDGCHC 5 cut(s) 456, 594, 928, 1040, 1064
Bsp143I GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
BspACI CCGC 3 cut(s) 60, 182, 538
BspANI GGCC 5 cut(s) 84, 273, 351, 387, 546
BspCNI CTCAG 2 cut(s) 606, 1044
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 4 cut(s) 306, 307, 388, 728
BspPI GGATC 1 cut(s) 1260
BspT104I TTCGAA 1 cut(s) 335
BsrBI CCGCTC 1 cut(s) 538
BsrDI GCAATG 4 cut(s) 709, 809, 975, 1121
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 3 cut(s) 125, 443, 1122
BssAI RCCGGY 1 cut(s) 80
BssECI CCNNGG 2 cut(s) 547, 848
BssMI GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
BssT1I CCWWGG 1 cut(s) 848
Bst2UI CCWGG 1 cut(s) 1201
Bst4CI ACNGT 4 cut(s) 343, 824, 863, 937
Bst6I CTCTTC 1 cut(s) 941
BstAPI GCANNNNNTGC 2 cut(s) 380, 808
BstBI TTCGAA 1 cut(s) 335
BstC8I GCNNGC 5 cut(s) 82, 349, 385, 536, 1073
BstDEI CTNAG 3 cut(s) 200, 593, 1031
BstF5I GGATG 3 cut(s) 447, 946, 1145
BstKTI GATC 6 cut(s) 163, 196, 293, 525, 1030, 1255
BstMAI GTCTC 2 cut(s) 546, 1295
BstMBI GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
BstMCI CGRYCG 1 cut(s) 85
BstMWI GCNNNNNNNGC 7 cut(s) 353, 380, 451, 808, 1068, 1099, 1132
BstNI CCWGG 1 cut(s) 1201
BstSCI CCNGG 3 cut(s) 168, 358, 1199
BstV1I GCAGC 2 cut(s) 389, 786
BstV2I GAAGAC 1 cut(s) 344
BstXI CCANNNNNNTGG 2 cut(s) 774, 994
BstZI CGGCCG 1 cut(s) 82
BsuRI GGCC 5 cut(s) 84, 273, 351, 387, 546
BtgZI GCGATG 1 cut(s) 119
BtsCI GGATG 3 cut(s) 447, 946, 1145
BtsIMutI CAGTG 1 cut(s) 1173
Cac8I GCNNGC 5 cut(s) 82, 349, 385, 536, 1073
CciI TCATGA 1 cut(s) 616
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 6 cut(s) 184, 305, 386, 424, 727, 1178
Csp6I GTAC 1 cut(s) 598
CviAII CATG 7 cut(s) 94, 413, 421, 428, 617, 1127, 1150
CviQI GTAC 1 cut(s) 598
DdeI CTNAG 3 cut(s) 200, 593, 1031
DpnI GATC 6 cut(s) 162, 195, 292, 524, 1029, 1254
DpnII GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
DraIII CACNNNGTG 1 cut(s) 785
EaeI YGGCCR 1 cut(s) 82
EagI CGGCCG 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 941
EarI CTCTTC 1 cut(s) 941
Ecl136II GAGCTC 4 cut(s) 592, 926, 1038, 1062
EclXI CGGCCG 1 cut(s) 82
Eco130I CCWWGG 1 cut(s) 848
Eco24I GRGCYC 4 cut(s) 594, 928, 1040, 1064
Eco47I GGWCC 5 cut(s) 184, 305, 424, 727, 1178
Eco52I CGGCCG 1 cut(s) 82
Eco53kI GAGCTC 4 cut(s) 592, 926, 1038, 1062
EcoICRI GAGCTC 4 cut(s) 592, 926, 1038, 1062
EcoO109I RGGNCCY 1 cut(s) 305
EcoRI GAATTC 1 cut(s) 6
EcoRII CCWGG 1 cut(s) 1199
EcoT14I CCWWGG 1 cut(s) 848
EcoT38I GRGCYC 4 cut(s) 594, 928, 1040, 1064
ErhI CCWWGG 1 cut(s) 848
Esp3I CGTCTC 1 cut(s) 546
FaeI CATG 7 cut(s) 97, 416, 424, 431, 620, 1130, 1153
FaqI GGGAC 2 cut(s) 291, 740
FatI CATG 7 cut(s) 93, 412, 420, 427, 616, 1126, 1149
FbaI TGATCA 1 cut(s) 522
FblI GTMKAC 1 cut(s) 432
Fnu4HI GCNGC 2 cut(s) 403, 800
FokI GGATG 3 cut(s) 454, 953, 1132
FriOI GRGCYC 4 cut(s) 594, 928, 1040, 1064
Fsp4HI GCNGC 2 cut(s) 403, 800
FspBI CTAG 3 cut(s) 446, 684, 849
GluI GCNGC 2 cut(s) 403, 800
GsuI CTGGAG 1 cut(s) 666
HaeIII GGCC 5 cut(s) 84, 273, 351, 387, 546
HapII CCGG 3 cut(s) 81, 170, 359
Hin1II CATG 7 cut(s) 97, 416, 424, 431, 620, 1130, 1153
HindIII AAGCTT 1 cut(s) 242
HinfI GANTC 7 cut(s) 45, 124, 483, 506, 622, 1157, 1303
HpaII CCGG 3 cut(s) 81, 170, 359
HphI GGTGA 3 cut(s) 34, 374, 797
Hpy166II GTNNAC 1 cut(s) 433
Hpy188I TCNGA 9 cut(s) 12, 136, 224, 238, 480, 511, 667, 916, 956
Hpy188III TCNNGA 5 cut(s) 278, 470, 617, 1033, 1181
Hpy8I GTNNAC 1 cut(s) 433
Hpy99I CGWCG 1 cut(s) 1212
HpyAV CCTTC 2 cut(s) 284, 1075
HpyCH4III ACNGT 4 cut(s) 343, 824, 863, 937
HpyCH4IV ACGT 2 cut(s) 285, 1196
HpyCH4V TGCA 9 cut(s) 130, 420, 690, 802, 811, 836, 962, 1126, 1265
HpyF10VI GCNNNNNNNGC 7 cut(s) 353, 380, 451, 808, 1068, 1099, 1132
HpyF3I CTNAG 3 cut(s) 200, 593, 1031
HpySE526I ACGT 2 cut(s) 285, 1196
Hsp92II CATG 7 cut(s) 97, 416, 424, 431, 620, 1130, 1153
KflI GGGWCCC 1 cut(s) 305
KroI GCCGGC 1 cut(s) 80
KroNI GCCGGC 1 cut(s) 82
Ksp22I TGATCA 1 cut(s) 522
Kzo9I GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
Lsp1109I GCAGC 2 cut(s) 389, 786
LweI GCATC 3 cut(s) 432, 778, 949
MaeI CTAG 3 cut(s) 446, 684, 849
MaeII ACGT 2 cut(s) 285, 1196
MaeIII GTNAC 3 cut(s) 777, 863, 980
MalI GATC 6 cut(s) 162, 195, 292, 524, 1029, 1254
MbiI CCGCTC 1 cut(s) 538
MboI GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
MboII GAAGA 4 cut(s) 188, 349, 904, 958
MhlI GDGCHC 5 cut(s) 456, 594, 928, 1040, 1064
MluCI AATT 6 cut(s) 6, 88, 139, 375, 602, 1317
MlyI GAGTC 2 cut(s) 492, 1297
MmeI TCCRAC 2 cut(s) 16, 858
MroNI GCCGGC 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 243
MseI TTAA 2 cut(s) 630, 1193
MslI CAYNNNNRTG 2 cut(s) 992, 1166
MspI CCGG 3 cut(s) 81, 170, 359
MspR9I CCNGG 3 cut(s) 170, 360, 1201
MvaI CCWGG 1 cut(s) 1201
MwoI GCNNNNNNNGC 7 cut(s) 353, 380, 451, 808, 1068, 1099, 1132
NaeI GCCGGC 1 cut(s) 82
NciI CCSGG 2 cut(s) 170, 360
NdeII GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
NgoMIV GCCGGC 1 cut(s) 80
NlaIII CATG 7 cut(s) 97, 416, 424, 431, 620, 1130, 1153
NlaIV GGNNCC 4 cut(s) 306, 307, 388, 728
NmeAIII GCCGAG 1 cut(s) 572
NmuCI GTSAC 1 cut(s) 777
NspV TTCGAA 1 cut(s) 335
PagI TCATGA 1 cut(s) 616
PdiI GCCGGC 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 243
PfeI GAWTC 5 cut(s) 45, 124, 506, 622, 1157
PkrI GCNGC 2 cut(s) 404, 801
PleI GAGTC 2 cut(s) 491, 1297
PpsI GAGTC 2 cut(s) 491, 1297
PpuMI RGGWCCY 1 cut(s) 305
Psp124BI GAGCTC 4 cut(s) 594, 928, 1040, 1064
Psp5II RGGWCCY 1 cut(s) 305
Psp6I CCWGG 1 cut(s) 1199
PspGI CCWGG 1 cut(s) 1199
PspN4I GGNNCC 4 cut(s) 306, 307, 388, 728
PspPI GGNCC 6 cut(s) 184, 305, 386, 424, 727, 1178
PspPPI RGGWCCY 1 cut(s) 305
RsaI GTAC 1 cut(s) 599
RsaNI GTAC 1 cut(s) 598
RseI CAYNNNNRTG 2 cut(s) 992, 1166
SacI GAGCTC 4 cut(s) 594, 928, 1040, 1064
SaqAI TTAA 2 cut(s) 630, 1193
SatI GCNGC 2 cut(s) 403, 800
Sau3AI GATC 6 cut(s) 160, 193, 290, 522, 1027, 1252
Sau96I GGNCC 6 cut(s) 184, 305, 386, 424, 727, 1178
SchI GAGTC 2 cut(s) 492, 1297
ScrFI CCNGG 3 cut(s) 170, 360, 1201
SduI GDGCHC 5 cut(s) 456, 594, 928, 1040, 1064
SfaNI GCATC 3 cut(s) 432, 778, 949
SfuI TTCGAA 1 cut(s) 335
SinI GGWCC 5 cut(s) 184, 305, 424, 727, 1178
SmiMI CAYNNNNRTG 2 cut(s) 992, 1166
SmlI CTYRAG 2 cut(s) 883, 1063
SmoI CTYRAG 2 cut(s) 883, 1063
Sse9I AATT 6 cut(s) 6, 88, 139, 375, 602, 1317
SsiI CCGC 3 cut(s) 60, 182, 538
SspMI CTAG 3 cut(s) 446, 684, 849
SstI GAGCTC 4 cut(s) 594, 928, 1040, 1064
StyD4I CCNGG 3 cut(s) 168, 358, 1199
StyI CCWWGG 1 cut(s) 848
TaaI ACNGT 4 cut(s) 343, 824, 863, 937
TaiI ACGT 2 cut(s) 288, 1199
TaqI TCGA 5 cut(s) 279, 289, 335, 1207, 1241
TasI AATT 6 cut(s) 6, 88, 139, 375, 602, 1317
TfiI GAWTC 5 cut(s) 45, 124, 506, 622, 1157
Tru1I TTAA 2 cut(s) 630, 1193
Tru9I TTAA 2 cut(s) 630, 1193
TscAI CASTG 1 cut(s) 1173
TseFI GTSAC 1 cut(s) 777
TseI GCWGC 2 cut(s) 402, 799
Tsp45I GTSAC 1 cut(s) 777
TspDTI ATGAA 8 cut(s) 145, 162, 206, 777, 1094, 1134, 1166, 1259
TspGWI ACGGA 1 cut(s) 570
TspRI CASTG 1 cut(s) 1173
VpaK11BI GGWCC 5 cut(s) 184, 305, 424, 727, 1178
XapI RAATTY 2 cut(s) 6, 602
XmaJI CCTAGG 1 cut(s) 848
XmiI GTMKAC 1 cut(s) 432
XmnI GAANNNNTTC 1 cut(s) 243
XspI CTAG 3 cut(s) 446, 684, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.