Prupe.8G051600_v2.0.a1

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0022454
Physical Location & Seq
Reverse (-)
5649604 .. 5650986
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G051600.1

Sequence Viewer

Length: 1383 bp
ATGGCTTCTTCGTCATCATCATCTTCATCTTCTTTGCTGCTCTTTCTCTCTCTACTTCTCCATCTACCTTATATAACTTCTTCCAATATTATCACCATACCCATCTCACATTTACCTAAAAACCCACATCCAGATCCTTACCAGCACCTCAGCTACTTAGCAAATTCCTCTTTAAAAAGAGCCCACCACCTCAAAAATCCCCAAACTACCCCTCCCCATACCAACACCAAAACCCCACTCTTCTCCAACAGCTATGGAGGCTACTCTATACCCCTGAGCTTTGGCACCCCTCCCCAAACCCTCCCCTTCATCATGGACACTGGCAGTGATTTAATTTGGTTCCCTTGCAGCAAAAACTACCAGTGCATCAATTGCTCCACTTACTACAACACCGCCAAAATCAAATCTTTTATTCCCAACTTCTCCTCATCTTCCAAACTCCTTGCCTGCTTGAACCCCAAATGCGCTCTGCTTCACCAAAAAATTCAGTGCCCAGATTGCAAACTTGGTTCGAAAAACTGTACCCGGGGCTGCCCTTTGTACAAAATCGTCTACGGCTCTGGCACAACAATTGGAATTCCACTCTCTGAAACGCTGCACCTCCCGACCCGACGCGTACCTGATTTCCTTGTGGGCTGCTCCATTCGCTCTACCCACCAACCCGCCGCTGGCATTGCTGGGTTGGGCCGCGGCCCAACTTCTCTCTCTTCCCAATTAGCCGTCAAAAAATTCTCCTACTGCCTTCTCTCTCGCCTCTTCGACGACACTAACAAAAGCAGCTCATTGGTCCTCGTCGGCGGCAAAGACTCCGTCAAGAAAACTAAAGGCGTCAGCTACACGCCGTTTGTGAAAAACCCAGAAGTCCCCAAGAAGCCTTTCTCCACCTATTACTACGTCGGCCTCCGCCGCATCAATGTGGGAGGGCGGCGCGTGAAGATTCCGTACAGATACCTGAGGCCTGACAAGAACGGCTCCGGCGGGACCATGGTCGATTCCGGGACCACATTCACGCTGATGGCGCATGAAGTGTTCGAGCGCGTGACGGGAGAGTTGGAGAAGCAGATGAAGGGCTACAAGAGGGCGGAGGAAGCGGAGACTTTGACTACGTTAAGGCCGTGCTATAATTTTTCTGGGATCGAAACGCCGGAGTTTCCAAGCGTGACGTTTCACTTCAAGGGAAGGGCTGAGATGGTGCTGCCGTTGGAGAATTATGTGGCCCCGGTCGGTGGGAAGGTGCTGTGCTTCACGATTCTGAGTGATAATGGGCCTATAATCTCGTCTGGGCCTTCTATTGTTCTGGGGAGTTTCCAAATGCAGAATTATCATGTGGAGTATGATTTGCAGAATGAGAGGTTTGGGTTCAAGCAACAGGAATGCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

461

Amino Acids

50.79

Weight (kDa)

9.37

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0022454)

Species Orthologous Gene IDs
prunus_persica Prupe.6G136800_v2.0.a1 Prupe.6G140800_v2.0.a1 Prupe.8G051600_v2.0.a1
pyrus_communis pycom03g10710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 284
AccI GTMKAC 1 cut(s) 552
AccII CGCG 4 cut(s) 615, 690, 930, 1038
AclWI GGATC 2 cut(s) 128, 1142
AcsI RAATTY 4 cut(s) 163, 483, 576, 728
AcyI GRCGYC 1 cut(s) 828
AfaI GTAC 4 cut(s) 523, 542, 618, 944
AfiI CCNNNNNNNGG 2 cut(s) 668, 1226
AflIII ACRYGT 1 cut(s) 613
AgsI TTSAA 3 cut(s) 454, 1174, 1363
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
AluBI AGCT 5 cut(s) 153, 252, 279, 780, 834
AluI AGCT 5 cut(s) 153, 252, 279, 780, 834
Alw26I GTCTC 1 cut(s) 1088
AlwI GGATC 2 cut(s) 128, 1142
Ama87I CYCGRG 1 cut(s) 525
AoxI GGCC 8 cut(s) 685, 691, 898, 956, 1112, 1215, 1265, 1283
ApeKI GCWGC 7 cut(s) 37, 348, 531, 595, 636, 777, 1195
ApoI RAATTY 4 cut(s) 163, 483, 576, 728
ArsI GACNNNNNNTTYG 2 cut(s) 795, 827
Asp700I GAANNNNTTC 1 cut(s) 875
AspLEI GCGC 4 cut(s) 467, 930, 1021, 1038
AspS9I GGNCC 8 cut(s) 685, 692, 787, 981, 999, 1216, 1265, 1283
AsuC2I CCSGG 4 cut(s) 526, 527, 997, 1220
AsuHPI GGTGA 2 cut(s) 85, 467
AsuII TTCGAA 1 cut(s) 512
AvaI CYCGRG 1 cut(s) 525
AvaII GGWCC 3 cut(s) 787, 981, 999
AxyI CCTNAGG 1 cut(s) 953
BaeGI GKGCMC 1 cut(s) 494
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 1 cut(s) 184
BarI GAAGNNNNNNTAC 2 cut(s) 926, 958
BbvCI CCTCAGC 1 cut(s) 149
BbvI GCAGC 7 cut(s) 24, 360, 518, 582, 623, 789, 1182
BccI CCATC 4 cut(s) 69, 110, 1009, 1183
BceAI ACGGC 6 cut(s) 571, 704, 826, 985, 1099, 1183
BcnI CCSGG 4 cut(s) 526, 527, 997, 1220
BcoDI GTCTC 1 cut(s) 1088
Bme1390I CCNGG 4 cut(s) 526, 527, 997, 1220
Bme18I GGWCC 3 cut(s) 787, 981, 999
BmeT110I CYCGRG 1 cut(s) 525
BmgT120I GGNCC 8 cut(s) 685, 692, 787, 981, 999, 1216, 1265, 1283
BmiI GGNNCC 6 cut(s) 286, 341, 973, 982, 1000, 1218
BmrFI CCNGG 4 cut(s) 526, 527, 997, 1220
BmsI GCATC 2 cut(s) 375, 918
BoxI GACNNNNGTC 1 cut(s) 986
Bpu10I CCTNAGC 2 cut(s) 149, 275
Bpu14I TTCGAA 1 cut(s) 512
BpuMI CCSGG 4 cut(s) 526, 527, 997, 1220
BsaHI GRCGYC 1 cut(s) 828
BsaJI CCNNGG 5 cut(s) 525, 526, 688, 984, 1218
BsaXI ACNNNNNCTCC 2 cut(s) 196, 226
Bsc4I CCNNNNNNNGG 2 cut(s) 668, 1226
Bse1I ACTGG 2 cut(s) 325, 361
Bse21I CCTNAGG 1 cut(s) 953
Bse3DI GCAATG 1 cut(s) 672
BseDI CCNNGG 5 cut(s) 525, 526, 688, 984, 1218
BseGI GGATG 1 cut(s) 127
BseLI CCNNNNNNNGG 2 cut(s) 668, 1226
BseMI GCAATG 1 cut(s) 672
BseMII CTCAG 5 cut(s) 163, 266, 944, 1176, 1244
BseNI ACTGG 2 cut(s) 325, 361
BseRI GAGGAG 1 cut(s) 415
BseSI GKGCMC 1 cut(s) 494
BseXI GCAGC 7 cut(s) 24, 360, 518, 582, 623, 789, 1182
BseYI CCCAGC 1 cut(s) 677
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 4 cut(s) 615, 690, 930, 1038
Bsh1285I CGRYCG 1 cut(s) 1224
BshFI GGCC 8 cut(s) 687, 693, 900, 958, 1114, 1217, 1267, 1285
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 1224
BsiHKCI CYCGRG 1 cut(s) 525
BsiSI CCGG 5 cut(s) 526, 975, 996, 1145, 1220
BslFI GGGAC 3 cut(s) 848, 994, 1012
BslI CCNNNNNNNGG 2 cut(s) 668, 1226
BsmAI GTCTC 1 cut(s) 1088
BsmFI GGGAC 3 cut(s) 848, 994, 1012
BsmI GAATGC 1 cut(s) 1379
BsnI GGCC 8 cut(s) 687, 693, 900, 958, 1114, 1217, 1267, 1285
BsoBI CYCGRG 1 cut(s) 525
Bsp119I TTCGAA 1 cut(s) 512
Bsp1286I GDGCHC 2 cut(s) 184, 494
Bsp1407I TGTACA 1 cut(s) 540
Bsp143I GATC 2 cut(s) 133, 1134
Bsp19I CCATGG 1 cut(s) 984
BspANI GGCC 8 cut(s) 687, 693, 900, 958, 1114, 1217, 1267, 1285
BspCNI CTCAG 5 cut(s) 162, 267, 945, 1177, 1245
BspFNI CGCG 4 cut(s) 615, 690, 930, 1038
BspLI GGNNCC 6 cut(s) 286, 341, 973, 982, 1000, 1218
BspPI GGATC 2 cut(s) 128, 1142
BspT104I TTCGAA 1 cut(s) 512
BspT107I GGYRCC 1 cut(s) 284
BsrDI GCAATG 1 cut(s) 672
BsrGI TGTACA 1 cut(s) 540
BsrI ACTGG 2 cut(s) 325, 361
BssECI CCNNGG 5 cut(s) 525, 526, 688, 984, 1218
BssMI GATC 2 cut(s) 133, 1134
BssNI GRCGYC 1 cut(s) 828
BssT1I CCWWGG 1 cut(s) 984
Bst4CI ACNGT 1 cut(s) 521
Bst6I CTCTTC 3 cut(s) 245, 712, 761
BstACI GRCGYC 1 cut(s) 828
BstAPI GCANNNNNTGC 1 cut(s) 372
BstAUI TGTACA 1 cut(s) 540
BstBI TTCGAA 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 448, 670
BstDEI CTNAG 6 cut(s) 149, 157, 275, 953, 1185, 1253
BstDSI CCRYGG 2 cut(s) 688, 984
BstF5I GGATG 1 cut(s) 127
BstFNI CGCG 4 cut(s) 615, 690, 930, 1038
BstHHI GCGC 4 cut(s) 467, 930, 1021, 1038
BstKTI GATC 2 cut(s) 136, 1137
BstMAI GTCTC 1 cut(s) 1088
BstMBI GATC 2 cut(s) 133, 1134
BstMCI CGRYCG 1 cut(s) 1224
BstMWI GCNNNNNNNGC 8 cut(s) 258, 372, 498, 645, 674, 906, 1018, 1088
BstPAI GACNNNNGTC 1 cut(s) 986
BstSCI CCNGG 4 cut(s) 524, 525, 995, 1218
BstSLI GKGCMC 1 cut(s) 494
BstUI CGCG 4 cut(s) 615, 690, 930, 1038
BstV1I GCAGC 7 cut(s) 24, 360, 518, 582, 623, 789, 1182
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
Bsu36I CCTNAGG 1 cut(s) 953
BsuRI GGCC 8 cut(s) 687, 693, 900, 958, 1114, 1217, 1267, 1285
BtgI CCRYGG 2 cut(s) 688, 984
BtsCI GGATG 1 cut(s) 127
BtsI GCAGTG 1 cut(s) 331
BtsIMutI CAGTG 4 cut(s) 318, 331, 368, 494
Cac8I GCNNGC 2 cut(s) 448, 670
CfoI GCGC 4 cut(s) 467, 930, 1021, 1038
Cfr13I GGNCC 8 cut(s) 685, 692, 787, 981, 999, 1216, 1265, 1283
Cfr42I CCGCGG 1 cut(s) 691
Cfr9I CCCGGG 1 cut(s) 525
CseI GACGC 2 cut(s) 621, 817
Csp6I GTAC 4 cut(s) 522, 541, 617, 943
CviAII CATG 4 cut(s) 313, 985, 1022, 1325
CviQI GTAC 4 cut(s) 522, 541, 617, 943
DdeI CTNAG 6 cut(s) 149, 157, 275, 953, 1185, 1253
DpnI GATC 2 cut(s) 135, 1136
DpnII GATC 2 cut(s) 133, 1134
DraI TTTAAA 1 cut(s) 174
Eam1104I CTCTTC 3 cut(s) 245, 712, 761
EarI CTCTTC 3 cut(s) 245, 712, 761
EciI GGCGGA 2 cut(s) 893, 1097
Eco130I CCWWGG 1 cut(s) 984
Eco147I AGGCCT 1 cut(s) 958
Eco24I GRGCYC 1 cut(s) 184
Eco47I GGWCC 3 cut(s) 787, 981, 999
Eco81I CCTNAGG 1 cut(s) 953
Eco88I CYCGRG 1 cut(s) 525
EcoRI GAATTC 1 cut(s) 576
EcoT14I CCWWGG 1 cut(s) 984
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 1 cut(s) 984
FaeI CATG 4 cut(s) 316, 988, 1025, 1328
FaqI GGGAC 3 cut(s) 848, 994, 1012
FatI CATG 4 cut(s) 312, 984, 1021, 1324
FauI CCCGC 2 cut(s) 670, 971
FblI GTMKAC 1 cut(s) 552
FokI GGATG 1 cut(s) 114
FriOI GRGCYC 1 cut(s) 184
GlaI GCGC 4 cut(s) 466, 929, 1020, 1037
GsaI CCCAGC 1 cut(s) 681
HaeIII GGCC 8 cut(s) 687, 693, 900, 958, 1114, 1217, 1267, 1285
HapII CCGG 5 cut(s) 526, 975, 996, 1145, 1220
HgaI GACGC 2 cut(s) 621, 817
HhaI GCGC 4 cut(s) 467, 930, 1021, 1038
Hin1I GRCGYC 1 cut(s) 828
Hin1II CATG 4 cut(s) 316, 988, 1025, 1328
Hin6I GCGC 4 cut(s) 465, 928, 1019, 1036
HinP1I GCGC 4 cut(s) 465, 928, 1019, 1036
HinfI GANTC 4 cut(s) 806, 937, 992, 1249
HpaII CCGG 5 cut(s) 526, 975, 996, 1145, 1220
HphI GGTGA 2 cut(s) 85, 467
Hpy166II GTNNAC 1 cut(s) 553
Hpy188I TCNGA 2 cut(s) 589, 1254
Hpy188III TCNNGA 4 cut(s) 131, 604, 814, 1246
Hpy8I GTNNAC 1 cut(s) 553
Hpy99I CGWCG 4 cut(s) 615, 764, 797, 899
HpyAV CCTTC 6 cut(s) 316, 752, 1060, 1173, 1225, 1296
HpyCH4III ACNGT 1 cut(s) 521
HpyCH4IV ACGT 3 cut(s) 894, 1106, 1163
HpyCH4V TGCA 7 cut(s) 348, 366, 501, 598, 1315, 1342, 1377
HpyF10VI GCNNNNNNNGC 8 cut(s) 258, 372, 498, 645, 674, 906, 1018, 1088
HpyF3I CTNAG 6 cut(s) 149, 157, 275, 953, 1185, 1253
HpySE526I ACGT 3 cut(s) 894, 1106, 1163
Hsp92I GRCGYC 1 cut(s) 828
Hsp92II CATG 4 cut(s) 316, 988, 1025, 1328
HspAI GCGC 4 cut(s) 465, 928, 1019, 1036
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 2 cut(s) 133, 1134
LmnI GCTCC 3 cut(s) 380, 644, 977
Lsp1109I GCAGC 7 cut(s) 24, 360, 518, 582, 623, 789, 1182
LweI GCATC 2 cut(s) 375, 918
MaeII ACGT 3 cut(s) 894, 1106, 1163
MaeIII GTNAC 2 cut(s) 1039, 1159
MalI GATC 2 cut(s) 135, 1136
MboI GATC 2 cut(s) 133, 1134
MboII GAAGA 8 cut(s) 15, 21, 72, 232, 423, 699, 748, 946
MfeI CAATTG 2 cut(s) 370, 570
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 2 cut(s) 184, 494
MluI ACGCGT 1 cut(s) 613
MlyI GAGTC 1 cut(s) 800
MmeI TCCRAC 3 cut(s) 270, 1032, 1182
MroXI GAANNNNTTC 1 cut(s) 875
MseI TTAA 3 cut(s) 173, 332, 1109
MslI CAYNNNNRTG 2 cut(s) 914, 1013
MspA1I CMGCKG 2 cut(s) 668, 690
MspI CCGG 5 cut(s) 526, 975, 996, 1145, 1220
MspR9I CCNGG 4 cut(s) 526, 527, 997, 1220
MunI CAATTG 2 cut(s) 370, 570
Mva1269I GAATGC 1 cut(s) 1379
MvnI CGCG 4 cut(s) 615, 690, 930, 1038
MwoI GCNNNNNNNGC 8 cut(s) 258, 372, 498, 645, 674, 906, 1018, 1088
NciI CCSGG 4 cut(s) 526, 527, 997, 1220
NcoI CCATGG 1 cut(s) 984
NdeII GATC 2 cut(s) 133, 1134
NlaIII CATG 4 cut(s) 316, 988, 1025, 1328
NlaIV GGNNCC 6 cut(s) 286, 341, 973, 982, 1000, 1218
NmuCI GTSAC 2 cut(s) 1039, 1159
NspV TTCGAA 1 cut(s) 512
PceI AGGCCT 1 cut(s) 958
PcsI WCGNNNNNNNCGW 1 cut(s) 1112
PctI GAATGC 1 cut(s) 1379
PdmI GAANNNNTTC 1 cut(s) 875
PfeI GAWTC 3 cut(s) 937, 992, 1249
PflFI GACNNNGTC 1 cut(s) 809
PfoI TCCNGGA 1 cut(s) 995
PleI GAGTC 1 cut(s) 800
PpsI GAGTC 1 cut(s) 800
PshAI GACNNNNGTC 1 cut(s) 986
PspFI CCCAGC 1 cut(s) 677
PspN4I GGNNCC 6 cut(s) 286, 341, 973, 982, 1000, 1218
PspPI GGNCC 8 cut(s) 685, 692, 787, 981, 999, 1216, 1265, 1283
PsuI RGATCY 1 cut(s) 133
PsyI GACNNNGTC 1 cut(s) 809
RsaI GTAC 4 cut(s) 523, 542, 618, 944
RsaNI GTAC 4 cut(s) 522, 541, 617, 943
RseI CAYNNNNRTG 2 cut(s) 914, 1013
SacII CCGCGG 1 cut(s) 691
SaqAI TTAA 3 cut(s) 173, 332, 1109
Sau3AI GATC 2 cut(s) 133, 1134
Sau96I GGNCC 8 cut(s) 685, 692, 787, 981, 999, 1216, 1265, 1283
SchI GAGTC 1 cut(s) 800
ScrFI CCNGG 4 cut(s) 526, 527, 997, 1220
SduI GDGCHC 2 cut(s) 184, 494
SfaNI GCATC 2 cut(s) 375, 918
Sfr303I CCGCGG 1 cut(s) 691
SfuI TTCGAA 1 cut(s) 512
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 3 cut(s) 787, 981, 999
SmaI CCCGGG 1 cut(s) 527
SmiMI CAYNNNNRTG 2 cut(s) 914, 1013
SseBI AGGCCT 1 cut(s) 958
SspI AATATT 1 cut(s) 88
StuI AGGCCT 1 cut(s) 958
StyD4I CCNGG 4 cut(s) 524, 525, 995, 1218
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 1 cut(s) 521
TaiI ACGT 3 cut(s) 897, 1109, 1166
TaqI TCGA 5 cut(s) 512, 759, 990, 1032, 1137
TatI WGTACW 1 cut(s) 540
TauI GCSGC 6 cut(s) 668, 690, 693, 801, 909, 928
TfiI GAWTC 3 cut(s) 937, 992, 1249
Tru1I TTAA 3 cut(s) 173, 332, 1109
Tru9I TTAA 3 cut(s) 173, 332, 1109
TscAI CASTG 4 cut(s) 325, 331, 368, 494
TseFI GTSAC 2 cut(s) 1039, 1159
TseI GCWGC 7 cut(s) 37, 348, 531, 595, 636, 777, 1195
Tsp45I GTSAC 2 cut(s) 1039, 1159
TspDTI ATGAA 4 cut(s) 15, 298, 1038, 1079
TspGWI ACGGA 2 cut(s) 799, 930
TspMI CCCGGG 1 cut(s) 525
TspRI CASTG 4 cut(s) 325, 331, 368, 494
Tth111I GACNNNGTC 1 cut(s) 809
VpaK11BI GGWCC 3 cut(s) 787, 981, 999
XapI RAATTY 4 cut(s) 163, 483, 576, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 665
XmaI CCCGGG 1 cut(s) 525
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.