AtCASP,CASP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18480 |
| fragaria_vesca | FvH4_5g12492 FvH4_5g12492 FvH4_5g12492 |
| malus_domestica | MD10G1081900.v1.1 |
| prunus_persica | Prupe.8G104400_v2.0.a1 |
| pyrus_communis | pycom05g06100 |
| rosa_chinensis | RchiOBHm_Chr7g0184861 |
| rosa_laevigata | RLG00000004948 |
| rosa_multiflora | Rmu_ssc0000289.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00269320 |
| rosa_rugosa | Rorug06G0465500 |
| rosa_samantha | Rh7AG077400 Rh7BG069900 Rh7CG070700 Rh7DG070100 |
| rosa_wichuraiana | Rw7G005800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1146 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 78, 1363 |
| AciI | CCGC | 5 cut(s) | 11, 18, 172, 1185, 1875 |
| AclWI | GGATC | 7 cut(s) | 15, 28, 341, 1437, 1714, 1734, 1833 |
| AcsI | RAATTY | 4 cut(s) | 86, 440, 907, 1125 |
| AcuI | CTGAAG | 3 cut(s) | 867, 1058, 1400 |
| AfaI | GTAC | 2 cut(s) | 114, 1835 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 17, 78, 792, 1167, 1185, 1237, 1363 |
| AflII | CTTAAG | 1 cut(s) | 1514 |
| AleI | CACNNNNGTG | 1 cut(s) | 1454 |
| Alw21I | GWGCWC | 4 cut(s) | 44, 191, 718, 1451 |
| Alw26I | GTCTC | 4 cut(s) | 24, 73, 1556, 1964 |
| AlwI | GGATC | 7 cut(s) | 15, 28, 341, 1437, 1714, 1734, 1833 |
| AoxI | GGCC | 3 cut(s) | 783, 1082, 1158 |
| ApaI | GGGCCC | 1 cut(s) | 787 |
| ApeKI | GCWGC | 3 cut(s) | 1046, 1802, 1872 |
| ApoI | RAATTY | 4 cut(s) | 86, 440, 907, 1125 |
| AspLEI | GCGC | 3 cut(s) | 504, 831, 2047 |
| AspS9I | GGNCC | 3 cut(s) | 601, 783, 784 |
| AsuHPI | GGTGA | 2 cut(s) | 1132, 1945 |
| AvaII | GGWCC | 1 cut(s) | 601 |
| BaeGI | GKGCMC | 1 cut(s) | 787 |
| BamHI | GGATCC | 1 cut(s) | 20 |
| BanII | GRGCYC | 3 cut(s) | 44, 132, 787 |
| BbsI | GAAGAC | 2 cut(s) | 496, 861 |
| Bbv12I | GWGCWC | 4 cut(s) | 44, 191, 718, 1451 |
| BbvI | GCAGC | 3 cut(s) | 1033, 1814, 1884 |
| BccI | CCATC | 3 cut(s) | 520, 760, 1298 |
| BceAI | ACGGC | 1 cut(s) | 809 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 695, 729, 1791, 1825 |
| BcoDI | GTCTC | 4 cut(s) | 24, 73, 1556, 1964 |
| BfaI | CTAG | 4 cut(s) | 192, 1443, 1701, 2050 |
| BfmI | CTRYAG | 2 cut(s) | 1387, 1719 |
| BfrI | CTTAAG | 1 cut(s) | 1514 |
| BglII | AGATCT | 1 cut(s) | 382 |
| BisI | GCNGC | 3 cut(s) | 1047, 1803, 1873 |
| BlpI | GCTNAGC | 1 cut(s) | 375 |
| BlsI | GCNGC | 3 cut(s) | 1048, 1804, 1874 |
| Bme18I | GGWCC | 1 cut(s) | 601 |
| BmgT120I | GGNCC | 3 cut(s) | 601, 783, 784 |
| BmiI | GGNNCC | 4 cut(s) | 9, 22, 342, 785 |
| BmrI | ACTGGG | 1 cut(s) | 1435 |
| BmsI | GCATC | 1 cut(s) | 906 |
| BmuI | ACTGGG | 1 cut(s) | 1435 |
| BpiI | GAAGAC | 2 cut(s) | 496, 861 |
| BpmI | CTGGAG | 2 cut(s) | 327, 1073 |
| Bpu10I | CCTNAGC | 2 cut(s) | 131, 1979 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 375 |
| BpuEI | CTTGAG | 4 cut(s) | 617, 827, 923, 1576 |
| Bsa29I | ATCGAT | 1 cut(s) | 1540 |
| BsaBI | GATNNNNATC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 2 cut(s) | 750, 1395 |
| BsaWI | WCCGGW | 1 cut(s) | 1230 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2019, 2049 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 17, 78, 792, 1167, 1185, 1237, 1363 |
| Bse1I | ACTGG | 5 cut(s) | 120, 1101, 1430, 1623, 1950 |
| Bse3DI | GCAATG | 2 cut(s) | 1025, 1999 |
| Bse8I | GATNNNNATC | 1 cut(s) | 351 |
| BseCI | ATCGAT | 1 cut(s) | 1540 |
| BseDI | CCNNGG | 2 cut(s) | 750, 1395 |
| BseGI | GGATG | 6 cut(s) | 124, 775, 897, 1375, 1789, 2011 |
| BseJI | GATNNNNATC | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 17, 78, 792, 1167, 1185, 1237, 1363 |
| BseMI | GCAATG | 2 cut(s) | 1025, 1999 |
| BseMII | CTCAG | 8 cut(s) | 145, 366, 399, 1443, 1452, 1503, 1761, 1970 |
| BseNI | ACTGG | 5 cut(s) | 120, 1101, 1430, 1623, 1950 |
| BseRI | GAGGAG | 4 cut(s) | 34, 37, 1070, 1735 |
| BseSI | GKGCMC | 1 cut(s) | 787 |
| BseXI | GCAGC | 3 cut(s) | 1033, 1814, 1884 |
| BsgI | GTGCAG | 1 cut(s) | 941 |
| Bsh1285I | CGRYCG | 1 cut(s) | 28 |
| BshFI | GGCC | 3 cut(s) | 785, 1084, 1160 |
| BshVI | ATCGAT | 1 cut(s) | 1540 |
| BsiEI | CGRYCG | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 4 cut(s) | 44, 191, 718, 1451 |
| BsiSI | CCGG | 1 cut(s) | 1231 |
| BslFI | GGGAC | 1 cut(s) | 834 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 17, 78, 792, 1167, 1185, 1237, 1363 |
| BsmAI | GTCTC | 4 cut(s) | 24, 73, 1556, 1964 |
| BsmBI | CGTCTC | 1 cut(s) | 73 |
| BsmFI | GGGAC | 1 cut(s) | 834 |
| BsmI | GAATGC | 2 cut(s) | 310, 1471 |
| BsnI | GGCC | 3 cut(s) | 785, 1084, 1160 |
| Bsp120I | GGGCCC | 1 cut(s) | 783 |
| Bsp1286I | GDGCHC | 6 cut(s) | 44, 132, 191, 718, 787, 1451 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 375 |
| BspACI | CCGC | 5 cut(s) | 11, 18, 172, 1185, 1875 |
| BspANI | GGCC | 3 cut(s) | 785, 1084, 1160 |
| BspCNI | CTCAG | 8 cut(s) | 144, 367, 400, 1444, 1453, 1502, 1760, 1971 |
| BspDI | ATCGAT | 1 cut(s) | 1540 |
| BspLI | GGNNCC | 4 cut(s) | 9, 22, 342, 785 |
| BspMAI | CTGCAG | 1 cut(s) | 1723 |
| BspPI | GGATC | 7 cut(s) | 15, 28, 341, 1437, 1714, 1734, 1833 |
| BspQI | GCTCTTC | 1 cut(s) | 492 |
| BspTI | CTTAAG | 1 cut(s) | 1514 |
| BsrDI | GCAATG | 2 cut(s) | 1025, 1999 |
| BsrI | ACTGG | 5 cut(s) | 120, 1101, 1430, 1623, 1950 |
| BssECI | CCNNGG | 2 cut(s) | 750, 1395 |
| BssT1I | CCWWGG | 1 cut(s) | 1395 |
| Bst4CI | ACNGT | 5 cut(s) | 509, 656, 875, 1257, 1682 |
| Bst6I | CTCTTC | 5 cut(s) | 55, 492, 573, 723, 1185 |
| BstAFI | CTTAAG | 1 cut(s) | 1514 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 4 cut(s) | 180, 687, 1134, 1719 |
| BstEII | GGTNACC | 1 cut(s) | 254 |
| BstF5I | GGATG | 6 cut(s) | 124, 775, 897, 1375, 1789, 2011 |
| BstHHI | GCGC | 3 cut(s) | 504, 831, 2047 |
| BstMAI | GTCTC | 4 cut(s) | 24, 73, 1556, 1964 |
| BstMCI | CGRYCG | 1 cut(s) | 28 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1610, 1989 |
| BstNSI | RCATGY | 1 cut(s) | 2045 |
| BstPI | GGTNACC | 1 cut(s) | 254 |
| BstSFI | CTRYAG | 2 cut(s) | 1387, 1719 |
| BstSLI | GKGCMC | 1 cut(s) | 787 |
| BstV1I | GCAGC | 3 cut(s) | 1033, 1814, 1884 |
| BstV2I | GAAGAC | 2 cut(s) | 496, 861 |
| BstX2I | RGATCY | 5 cut(s) | 20, 346, 382, 1429, 1726 |
| BstYI | RGATCY | 5 cut(s) | 20, 346, 382, 1429, 1726 |
| Bsu15I | ATCGAT | 1 cut(s) | 1540 |
| BsuRI | GGCC | 3 cut(s) | 785, 1084, 1160 |
| BsuTUI | ATCGAT | 1 cut(s) | 1540 |
| BtgZI | GCGATG | 1 cut(s) | 919 |
| BtsCI | GGATG | 6 cut(s) | 124, 775, 897, 1375, 1789, 2011 |
| BtsI | GCAGTG | 1 cut(s) | 1143 |
| BtsIMutI | CAGTG | 5 cut(s) | 661, 858, 880, 1143, 1449 |
| Cac8I | GCNNGC | 4 cut(s) | 180, 687, 1134, 1719 |
| CfoI | GCGC | 3 cut(s) | 504, 831, 2047 |
| Cfr13I | GGNCC | 3 cut(s) | 601, 783, 784 |
| ClaI | ATCGAT | 1 cut(s) | 1540 |
| Csp6I | GTAC | 2 cut(s) | 113, 1834 |
| CviAII | CATG | 4 cut(s) | 680, 949, 1244, 2042 |
| CviQI | GTAC | 2 cut(s) | 113, 1834 |
| DraI | TTTAAA | 1 cut(s) | 465 |
| Eam1104I | CTCTTC | 5 cut(s) | 55, 492, 573, 723, 1185 |
| EarI | CTCTTC | 5 cut(s) | 55, 492, 573, 723, 1185 |
| EciI | GGCGGA | 2 cut(s) | 33, 187 |
| Ecl136II | GAGCTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 1 cut(s) | 1395 |
| Eco24I | GRGCYC | 3 cut(s) | 44, 132, 787 |
| Eco47I | GGWCC | 1 cut(s) | 601 |
| Eco53kI | GAGCTC | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 3 cut(s) | 867, 1058, 1400 |
| Eco91I | GGTNACC | 1 cut(s) | 254 |
| EcoICRI | GAGCTC | 1 cut(s) | 42 |
| EcoO109I | RGGNCCY | 1 cut(s) | 601 |
| EcoO65I | GGTNACC | 1 cut(s) | 254 |
| EcoRI | GAATTC | 2 cut(s) | 440, 907 |
| EcoT14I | CCWWGG | 1 cut(s) | 1395 |
| EcoT38I | GRGCYC | 3 cut(s) | 44, 132, 787 |
| ErhI | CCWWGG | 1 cut(s) | 1395 |
| Esp3I | CGTCTC | 1 cut(s) | 73 |
| FaeI | CATG | 4 cut(s) | 683, 952, 1247, 2045 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 417, 449, 1254, 1286 |
| FaqI | GGGAC | 1 cut(s) | 834 |
| FatI | CATG | 4 cut(s) | 679, 948, 1243, 2041 |
| FauI | CCCGC | 1 cut(s) | 1178 |
| Fnu4HI | GCNGC | 3 cut(s) | 1047, 1803, 1873 |
| FokI | GGATG | 6 cut(s) | 131, 782, 884, 1382, 1796, 2018 |
| FriOI | GRGCYC | 3 cut(s) | 44, 132, 787 |
| Fsp4HI | GCNGC | 3 cut(s) | 1047, 1803, 1873 |
| FspBI | CTAG | 4 cut(s) | 192, 1443, 1701, 2050 |
| GlaI | GCGC | 3 cut(s) | 503, 830, 2046 |
| GluI | GCNGC | 3 cut(s) | 1047, 1803, 1873 |
| GsuI | CTGGAG | 2 cut(s) | 327, 1073 |
| HaeIII | GGCC | 3 cut(s) | 785, 1084, 1160 |
| HapII | CCGG | 1 cut(s) | 1231 |
| HhaI | GCGC | 3 cut(s) | 504, 831, 2047 |
| Hin1II | CATG | 4 cut(s) | 683, 952, 1247, 2045 |
| Hin6I | GCGC | 3 cut(s) | 502, 829, 2045 |
| HinP1I | GCGC | 3 cut(s) | 502, 829, 2045 |
| HincII | GTYRAC | 1 cut(s) | 1608 |
| HindII | GTYRAC | 1 cut(s) | 1608 |
| HindIII | AAGCTT | 2 cut(s) | 176, 207 |
| HinfI | GANTC | 7 cut(s) | 404, 469, 887, 1208, 1542, 1660, 1757 |
| HpaI | GTTAAC | 1 cut(s) | 1608 |
| HpaII | CCGG | 1 cut(s) | 1231 |
| HphI | GGTGA | 2 cut(s) | 1132, 1945 |
| Hpy166II | GTNNAC | 3 cut(s) | 113, 1608, 1953 |
| Hpy8I | GTNNAC | 3 cut(s) | 113, 1608, 1953 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 5 cut(s) | 94, 811, 1375, 1582, 1816 |
| HpyCH4III | ACNGT | 5 cut(s) | 509, 656, 875, 1257, 1682 |
| HpyCH4IV | ACGT | 2 cut(s) | 1482, 1879 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1610, 1989 |
| HpySE526I | ACGT | 2 cut(s) | 1482, 1879 |
| Hsp92II | CATG | 4 cut(s) | 683, 952, 1247, 2045 |
| HspAI | GCGC | 3 cut(s) | 502, 829, 2045 |
| KspAI | GTTAAC | 1 cut(s) | 1608 |
| LguI | GCTCTTC | 1 cut(s) | 492 |
| LmnI | GCTCC | 7 cut(s) | 13, 47, 346, 836, 1240, 1446, 1601 |
| Lsp1109I | GCAGC | 3 cut(s) | 1033, 1814, 1884 |
| LweI | GCATC | 1 cut(s) | 906 |
| MaeI | CTAG | 4 cut(s) | 192, 1443, 1701, 2050 |
| MaeII | ACGT | 2 cut(s) | 1482, 1879 |
| MaeIII | GTNAC | 2 cut(s) | 254, 1526 |
| MfeI | CAATTG | 2 cut(s) | 620, 698 |
| MflI | RGATCY | 5 cut(s) | 20, 346, 382, 1429, 1726 |
| MhlI | GDGCHC | 6 cut(s) | 44, 132, 191, 718, 787, 1451 |
| MlyI | GAGTC | 1 cut(s) | 1217 |
| MmeI | TCCRAC | 2 cut(s) | 48, 1344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1454 |
| MspA1I | CMGCKG | 1 cut(s) | 1875 |
| MspCI | CTTAAG | 1 cut(s) | 1514 |
| MspI | CCGG | 1 cut(s) | 1231 |
| MunI | CAATTG | 2 cut(s) | 620, 698 |
| Mva1269I | GAATGC | 2 cut(s) | 310, 1471 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1610, 1989 |
| NlaIII | CATG | 4 cut(s) | 683, 952, 1247, 2045 |
| NlaIV | GGNNCC | 4 cut(s) | 9, 22, 342, 785 |
| NspI | RCATGY | 1 cut(s) | 2045 |
| OliI | CACNNNNGTG | 1 cut(s) | 1454 |
| PciSI | GCTCTTC | 1 cut(s) | 492 |
| PctI | GAATGC | 2 cut(s) | 310, 1471 |
| PfeI | GAWTC | 6 cut(s) | 404, 469, 887, 1542, 1660, 1757 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 78, 1363 |
| PkrI | GCNGC | 3 cut(s) | 1048, 1804, 1874 |
| PleI | GAGTC | 1 cut(s) | 1216 |
| PpsI | GAGTC | 1 cut(s) | 1216 |
| PpuMI | RGGWCCY | 1 cut(s) | 601 |
| PsiI | TTATAA | 1 cut(s) | 1146 |
| Psp124BI | GAGCTC | 1 cut(s) | 44 |
| Psp5II | RGGWCCY | 1 cut(s) | 601 |
| PspEI | GGTNACC | 1 cut(s) | 254 |
| PspN4I | GGNNCC | 4 cut(s) | 9, 22, 342, 785 |
| PspOMI | GGGCCC | 1 cut(s) | 783 |
| PspPI | GGNCC | 3 cut(s) | 601, 783, 784 |
| PspPPI | RGGWCCY | 1 cut(s) | 601 |
| PstI | CTGCAG | 1 cut(s) | 1723 |
| PsuI | RGATCY | 5 cut(s) | 20, 346, 382, 1429, 1726 |
| RsaI | GTAC | 2 cut(s) | 114, 1835 |
| RsaNI | GTAC | 2 cut(s) | 113, 1834 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1454 |
| SacI | GAGCTC | 1 cut(s) | 44 |
| SapI | GCTCTTC | 1 cut(s) | 492 |
| SatI | GCNGC | 3 cut(s) | 1047, 1803, 1873 |
| Sau96I | GGNCC | 3 cut(s) | 601, 783, 784 |
| SchI | GAGTC | 1 cut(s) | 1217 |
| SduI | GDGCHC | 6 cut(s) | 44, 132, 191, 718, 787, 1451 |
| SfaNI | GCATC | 1 cut(s) | 906 |
| SfcI | CTRYAG | 2 cut(s) | 1387, 1719 |
| SinI | GGWCC | 1 cut(s) | 601 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1454 |
| SmlI | CTYRAG | 5 cut(s) | 596, 806, 902, 1514, 1555 |
| SmoI | CTYRAG | 5 cut(s) | 596, 806, 902, 1514, 1555 |
| SsiI | CCGC | 5 cut(s) | 11, 18, 172, 1185, 1875 |
| SspI | AATATT | 1 cut(s) | 964 |
| SspMI | CTAG | 4 cut(s) | 192, 1443, 1701, 2050 |
| SstI | GAGCTC | 1 cut(s) | 44 |
| StyI | CCWWGG | 1 cut(s) | 1395 |
| TaaI | ACNGT | 5 cut(s) | 509, 656, 875, 1257, 1682 |
| TaiI | ACGT | 2 cut(s) | 1485, 1882 |
| TaqI | TCGA | 4 cut(s) | 38, 705, 1540, 1811 |
| TaqII | GACCGA | 1 cut(s) | 42 |
| TatI | WGTACW | 1 cut(s) | 112 |
| TfiI | GAWTC | 6 cut(s) | 404, 469, 887, 1542, 1660, 1757 |
| TscAI | CASTG | 5 cut(s) | 661, 865, 880, 1143, 1456 |
| TseI | GCWGC | 3 cut(s) | 1046, 1802, 1872 |
| TspDTI | ATGAA | 8 cut(s) | 437, 741, 786, 867, 999, 1076, 1260, 1353 |
| TspGWI | ACGGA | 1 cut(s) | 52 |
| TspRI | CASTG | 5 cut(s) | 661, 865, 880, 1143, 1456 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 78, 1363 |
| Vha464I | CTTAAG | 1 cut(s) | 1514 |
| VpaK11BI | GGWCC | 1 cut(s) | 601 |
| XapI | RAATTY | 4 cut(s) | 86, 440, 907, 1125 |
| XbaI | TCTAGA | 1 cut(s) | 1700 |
| XceI | RCATGY | 1 cut(s) | 2045 |
| XspI | CTAG | 4 cut(s) | 192, 1443, 1701, 2050 |