Prupe.8G214500_v2.0.a1

Tyrosine decarboxylase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
19722714 .. 19727410
4697 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G214500.2

Sequence Viewer

Length: 1464 bp
ATGGAGAGTGGGCTGAAGCCAATGGATGCTGAGCAGCTCAGAGAGAATGCCCACAAGATGGTAGATTTCATTGCTGATTACTACAAAACCATAGAGAATTTCCCTGTTCTCAGCCAAGTGCAGCCGGGATATCTCCGGGAACTTTTACCGGATTCTGCACCTACCCATCCCGAGCCTTTGCAACATATTTTTGATGACATTCAGGCTAAGATATTACCAGGGGTTACCCATTGGCAGAGCCCAAATTTCTTTGGGTACTACCCTTCCAACAGCAGCATTGCTGGATTTTTAGGTGAAATGATGAGCGCAGGCTTAAACATTGTTGGGTTCAGCTGGATAACTTCTCCTGCTGCAACTGAACTTGAAATGATCGTATTGGATTGGTTTGGTAAAATGCTTAAACTACCTGAAGAATTTCTTTCAGCAGGAAAAGGTGGTGGAGTGATACAAGGCACAGCAAGTGAAGCTGTTCTCGTTGTTCTGTTGGCAGCTCGTGACAAGATTTTGAGGCGAGTAGGAAAAAATTCCCTTGAGAAGCTTGTTGTCTATGCATCTGATCAAACACATTCAGCTTTGCAAAAAGCTTGTCAGATAGGGGGAATCCATCCTGAGAATTGCAGGCTGCTGAGGACTGATTCTTCTACTAATTATGCCCTTTCTCCCAATGTACTTAATGAAGCGATTTCAAACGACGTCACCAGTGGTTTAATTCCATTTTTCCTATGTGCGACAGTCGGTACTACTTCATCAACGGCTGTTGACCCCTTGCTAGAACTGGGAAAGATTGCAAAGAGCAATGACATGTGGTTCCATGTGGATGCTGCATATGCTGGTAGTGCTTGTATATGTCCAGAGTACCGCCATTACATTGATGGTGTTGAAGAGGCAGACTCATTTAACACAAATGCACATAAATGGTTTCTCACGAACTTTGACTGTTCAGTGCTCTGGATCAAGGATAGAAATGCTTTGATCCAGGCTCTGTCTACAAATCCTGAGTTCCTAAAAAACAAGGCCTCTCAAGCAAACTTGGTTGTGGATTACAAAGACTGGCAAATCCCACTTGGACGTCGGTTTAGATCATTAAAGCTATGGATGGTGCTGAGACTTTATGGTCTGGAAAACCTACAATCATATATAAGAAACCATATTAATTTAGCTAAACACTTCAAAGAGCTTGTTGCTCAAGACCCCAGATTTGAGATTGTTACTCCGCGGCTATTTTCATTAGTTTGTTTCCGTCTTCTGCCCCCTCATAACGACGAAACATGTGCTACTAAACTGAATCATGGCCTATTAGATGCTGTGAACGCAACCGGGAAGATTTTTATTTCTCACACAGTCCTGTCAGGGAAATACTTGTTACGTCTTGCAGTAGGAGCTCCATTGACTGAGGAGAGGCATGTGAATGCAGCATGGAAGCTTTTGCAAGATGAGGCTTCTGCCCTGCTTGCAACTCTTTAG

Protein Analysis

488

Amino Acids

54.2

Weight (kDa)

6.11

Isoelectric Point (pI)

41.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1113
AatII GACGTC 2 cut(s) 696, 1072
AccB7I CCANNNNNTGG 1 cut(s) 58
AccI GTMKAC 1 cut(s) 986
AccII CGCG 1 cut(s) 1216
AciI CCGC 3 cut(s) 859, 1214, 1216
AclWI GGATC 2 cut(s) 959, 967
AcsI RAATTY 4 cut(s) 97, 244, 413, 523
AcuI CTGAAG 2 cut(s) 35, 429
AcyI GRCGYC 2 cut(s) 693, 1069
AfaI GTAC 4 cut(s) 257, 669, 739, 857
AfiI CCNNNNNNNGG 1 cut(s) 58
AflIII ACRYGT 2 cut(s) 801, 1268
AgsI TTSAA 4 cut(s) 365, 687, 881, 1171
AjnI CCWGG 2 cut(s) 217, 975
Alw21I GWGCWC 2 cut(s) 948, 1384
Alw26I GTCTC 1 cut(s) 1099
AlwI GGATC 2 cut(s) 959, 967
AlwNI CAGNNNCTG 1 cut(s) 982
Ama87I CYCGRG 1 cut(s) 170
AoxI GGCC 2 cut(s) 1014, 1291
ApeKI GCWGC 8 cut(s) 34, 121, 273, 350, 488, 622, 821, 1412
ApoI RAATTY 4 cut(s) 97, 244, 413, 523
ArsI GACNNNNNNTTYG 4 cut(s) 571, 603, 1181, 1213
AseI ATTAAT 1 cut(s) 1152
Asp700I GAANNNNTTC 3 cut(s) 414, 468, 523
AspLEI GCGC 1 cut(s) 308
AsuC2I CCSGG 3 cut(s) 126, 137, 1318
AsuHPI GGTGA 2 cut(s) 305, 688
AvaI CYCGRG 1 cut(s) 170
BanII GRGCYC 2 cut(s) 242, 1384
BauI CACGAG 1 cut(s) 492
BbsI GAAGAC 1 cut(s) 1235
Bbv12I GWGCWC 2 cut(s) 948, 1384
BbvCI CCTCAGC 1 cut(s) 626
BbvI GCAGC 8 cut(s) 46, 133, 285, 337, 500, 609, 808, 1424
BccI CCATC 5 cut(s) 52, 174, 612, 866, 1090
BceAI ACGGC 1 cut(s) 768
BcgI CGANNNNNNTGC 2 cut(s) 1253, 1287
BciT130I CCWGG 2 cut(s) 219, 977
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 3 cut(s) 126, 137, 1318
BcoDI GTCTC 1 cut(s) 1099
BfaI CTAG 1 cut(s) 770
BisI GCNGC 9 cut(s) 35, 122, 274, 351, 489, 623, 822, 1217, 1413
BlpI GCTNAGC 1 cut(s) 30
BlsI GCNGC 9 cut(s) 36, 123, 275, 352, 490, 624, 823, 1218, 1414
Bme1390I CCNGG 5 cut(s) 126, 137, 219, 977, 1318
BmeT110I CYCGRG 1 cut(s) 170
BmiI GGNNCC 1 cut(s) 809
BmrFI CCNGG 5 cut(s) 126, 137, 219, 977, 1318
BmrI ACTGGG 1 cut(s) 785
BmsI GCATC 4 cut(s) 16, 560, 808, 1291
BmuI ACTGGG 1 cut(s) 785
BpiI GAAGAC 1 cut(s) 1235
BplI GAGNNNNNCTC 2 cut(s) 875, 907
Bpu10I CCTNAGC 1 cut(s) 626
Bpu1102I GCTNAGC 1 cut(s) 30
BpuEI CTTGAG 3 cut(s) 551, 1005, 1170
BpuMI CCSGG 3 cut(s) 126, 137, 1318
BsaHI GRCGYC 2 cut(s) 693, 1069
BsaJI CCNNGG 2 cut(s) 218, 1214
BsaWI WCCGGW 1 cut(s) 148
Bsc4I CCNNNNNNNGG 1 cut(s) 58
Bse1I ACTGG 3 cut(s) 699, 780, 1055
Bse3DI GCAATG 3 cut(s) 69, 276, 802
BseBI CCWGG 2 cut(s) 219, 977
BseDI CCNNGG 2 cut(s) 218, 1214
BseGI GGATG 5 cut(s) 31, 166, 604, 823, 1101
BseLI CCNNNNNNNGG 1 cut(s) 58
BseMI GCAATG 3 cut(s) 69, 276, 802
BseMII CTCAG 8 cut(s) 21, 52, 124, 600, 617, 987, 1094, 1383
BseNI ACTGG 3 cut(s) 699, 780, 1055
BseRI GAGGAG 1 cut(s) 1409
BseXI GCAGC 8 cut(s) 46, 133, 285, 337, 500, 609, 808, 1424
BsgI GTGCAG 2 cut(s) 140, 141
Bsh1236I CGCG 1 cut(s) 1216
BshFI GGCC 2 cut(s) 1016, 1293
BsiHKAI GWGCWC 2 cut(s) 948, 1384
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 4 cut(s) 125, 136, 149, 1317
BslI CCNNNNNNNGG 1 cut(s) 58
BsmAI GTCTC 1 cut(s) 1099
BsmI GAATGC 2 cut(s) 52, 1414
BsnI GGCC 2 cut(s) 1016, 1293
BsoBI CYCGRG 1 cut(s) 170
Bsp1286I GDGCHC 3 cut(s) 242, 948, 1384
Bsp143I GATC 5 cut(s) 369, 556, 951, 972, 1079
Bsp1720I GCTNAGC 1 cut(s) 30
BspACI CCGC 3 cut(s) 859, 1214, 1216
BspANI GGCC 2 cut(s) 1016, 1293
BspCNI CTCAG 8 cut(s) 22, 51, 123, 601, 618, 988, 1095, 1384
BspFNI CGCG 1 cut(s) 1216
BspLI GGNNCC 1 cut(s) 809
BspPI GGATC 2 cut(s) 959, 967
BsrDI GCAATG 3 cut(s) 69, 276, 802
BsrI ACTGG 3 cut(s) 699, 780, 1055
BssECI CCNNGG 2 cut(s) 218, 1214
BssMI GATC 5 cut(s) 369, 556, 951, 972, 1079
BssNI GRCGYC 2 cut(s) 693, 1069
BssSI CACGAG 1 cut(s) 492
Bst2BI CACGAG 1 cut(s) 492
Bst2UI CCWGG 2 cut(s) 219, 977
Bst4CI ACNGT 3 cut(s) 733, 938, 1342
Bst6I CTCTTC 1 cut(s) 876
BstACI GRCGYC 2 cut(s) 693, 1069
BstC8I GCNNGC 3 cut(s) 310, 620, 1452
BstDEI CTNAG 9 cut(s) 30, 38, 110, 207, 609, 626, 996, 1103, 1392
BstDSI CCRYGG 1 cut(s) 1214
BstEII GGTNACC 1 cut(s) 223
BstF5I GGATG 5 cut(s) 31, 166, 604, 823, 1101
BstFNI CGCG 1 cut(s) 1216
BstHHI GCGC 1 cut(s) 308
BstKTI GATC 5 cut(s) 372, 559, 954, 975, 1082
BstMAI GTCTC 1 cut(s) 1099
BstMBI GATC 5 cut(s) 369, 556, 951, 972, 1079
BstMWI GCNNNNNNNGC 7 cut(s) 464, 827, 836, 1022, 1310, 1379, 1451
BstNI CCWGG 2 cut(s) 219, 977
BstNSI RCATGY 3 cut(s) 805, 1272, 1406
BstPI GGTNACC 1 cut(s) 223
BstSCI CCNGG 5 cut(s) 124, 135, 217, 975, 1316
BstUI CGCG 1 cut(s) 1216
BstV1I GCAGC 8 cut(s) 46, 133, 285, 337, 500, 609, 808, 1424
BstV2I GAAGAC 1 cut(s) 1235
BsuRI GGCC 2 cut(s) 1016, 1293
BtgI CCRYGG 1 cut(s) 1214
BtsCI GGATG 5 cut(s) 31, 166, 604, 823, 1101
BtsIMutI CAGTG 2 cut(s) 706, 948
Cac8I GCNNGC 3 cut(s) 310, 620, 1452
CaiI CAGNNNCTG 1 cut(s) 982
CfoI GCGC 1 cut(s) 308
Cfr42I CCGCGG 1 cut(s) 1217
Csp6I GTAC 4 cut(s) 256, 668, 738, 856
CviAII CATG 6 cut(s) 802, 812, 1269, 1289, 1403, 1416
CviQI GTAC 4 cut(s) 256, 668, 738, 856
DdeI CTNAG 9 cut(s) 30, 38, 110, 207, 609, 626, 996, 1103, 1392
DpnI GATC 5 cut(s) 371, 558, 953, 974, 1081
DpnII GATC 5 cut(s) 369, 556, 951, 972, 1079
DrdI GACNNNNNNGTC 1 cut(s) 1113
DseDI GACNNNNNNGTC 1 cut(s) 1113
Eam1104I CTCTTC 1 cut(s) 876
EarI CTCTTC 1 cut(s) 876
Ecl136II GAGCTC 1 cut(s) 1382
Eco147I AGGCCT 1 cut(s) 1016
Eco24I GRGCYC 2 cut(s) 242, 1384
Eco32I GATATC 1 cut(s) 131
Eco53kI GAGCTC 1 cut(s) 1382
Eco57I CTGAAG 2 cut(s) 35, 429
Eco88I CYCGRG 1 cut(s) 170
Eco91I GGTNACC 1 cut(s) 223
EcoICRI GAGCTC 1 cut(s) 1382
EcoO65I GGTNACC 1 cut(s) 223
EcoRII CCWGG 2 cut(s) 217, 975
EcoRV GATATC 1 cut(s) 131
EcoT22I ATGCAT 1 cut(s) 553
EcoT38I GRGCYC 2 cut(s) 242, 1384
FaeI CATG 6 cut(s) 805, 815, 1272, 1292, 1406, 1419
FalI AAGNNNNNCTT 2 cut(s) 402, 434
FatI CATG 6 cut(s) 801, 811, 1268, 1288, 1402, 1415
FauNDI CATATG 1 cut(s) 826
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 1 cut(s) 986
Fnu4HI GCNGC 9 cut(s) 35, 122, 274, 351, 489, 623, 822, 1217, 1413
FokI GGATG 5 cut(s) 38, 153, 591, 830, 1108
FriOI GRGCYC 2 cut(s) 242, 1384
Fsp4HI GCNGC 9 cut(s) 35, 122, 274, 351, 489, 623, 822, 1217, 1413
FspBI CTAG 1 cut(s) 770
GlaI GCGC 1 cut(s) 307
GluI GCNGC 9 cut(s) 35, 122, 274, 351, 489, 623, 822, 1217, 1413
HaeIII GGCC 2 cut(s) 1016, 1293
HapII CCGG 4 cut(s) 125, 136, 149, 1317
HhaI GCGC 1 cut(s) 308
Hin1I GRCGYC 2 cut(s) 693, 1069
Hin1II CATG 6 cut(s) 805, 815, 1272, 1292, 1406, 1419
Hin6I GCGC 1 cut(s) 306
HinP1I GCGC 1 cut(s) 306
HincII GTYRAC 1 cut(s) 760
HindII GTYRAC 1 cut(s) 760
HindIII AAGCTT 3 cut(s) 536, 582, 1421
HinfI GANTC 5 cut(s) 152, 600, 635, 890, 1285
HpaII CCGG 4 cut(s) 125, 136, 149, 1317
HphI GGTGA 2 cut(s) 305, 688
Hpy166II GTNNAC 3 cut(s) 760, 987, 1309
Hpy188I TCNGA 3 cut(s) 41, 556, 591
Hpy188III TCNNGA 9 cut(s) 170, 494, 608, 851, 925, 949, 995, 1118, 1187
Hpy8I GTNNAC 3 cut(s) 760, 987, 1309
Hpy99I CGWCG 3 cut(s) 695, 1074, 1265
HpyAV CCTTC 1 cut(s) 273
HpyCH4III ACNGT 3 cut(s) 733, 938, 1342
HpyCH4IV ACGT 3 cut(s) 693, 1069, 1366
HpyF10VI GCNNNNNNNGC 7 cut(s) 464, 827, 836, 1022, 1310, 1379, 1451
HpyF3I CTNAG 9 cut(s) 30, 38, 110, 207, 609, 626, 996, 1103, 1392
HpySE526I ACGT 3 cut(s) 693, 1069, 1366
Hsp92I GRCGYC 2 cut(s) 693, 1069
Hsp92II CATG 6 cut(s) 805, 815, 1272, 1292, 1406, 1419
HspAI GCGC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 556
KspI CCGCGG 1 cut(s) 1217
Kzo9I GATC 5 cut(s) 369, 556, 951, 972, 1079
LmnI GCTCC 2 cut(s) 1379, 1387
Lsp1109I GCAGC 8 cut(s) 46, 133, 285, 337, 500, 609, 808, 1424
LweI GCATC 4 cut(s) 16, 560, 808, 1291
MaeI CTAG 1 cut(s) 770
MaeII ACGT 3 cut(s) 693, 1069, 1366
MaeIII GTNAC 5 cut(s) 223, 494, 694, 1207, 1362
MalI GATC 5 cut(s) 371, 558, 953, 974, 1081
MboI GATC 5 cut(s) 369, 556, 951, 972, 1079
MboII GAAGA 5 cut(s) 422, 630, 893, 1235, 1333
MhlI GDGCHC 3 cut(s) 242, 948, 1384
MluCI AATT 8 cut(s) 97, 244, 413, 523, 613, 646, 708, 1153
MlyI GAGTC 1 cut(s) 884
MmeI TCCRAC 1 cut(s) 291
MnlI CCTC 8 cut(s) 501, 621, 877, 1027, 1263, 1387, 1392, 1429
Mph1103I ATGCAT 1 cut(s) 553
MroXI GAANNNNTTC 3 cut(s) 414, 468, 523
MseI TTAA 7 cut(s) 314, 399, 672, 707, 897, 1085, 1152
MslI CAYNNNNRTG 3 cut(s) 816, 913, 1407
MspA1I CMGCKG 2 cut(s) 333, 1216
MspI CCGG 4 cut(s) 125, 136, 149, 1317
MspR9I CCNGG 5 cut(s) 126, 137, 219, 977, 1318
Mva1269I GAATGC 2 cut(s) 52, 1414
MvaI CCWGG 2 cut(s) 219, 977
MvnI CGCG 1 cut(s) 1216
MwoI GCNNNNNNNGC 7 cut(s) 464, 827, 836, 1022, 1310, 1379, 1451
NciI CCSGG 3 cut(s) 126, 137, 1318
NdeI CATATG 1 cut(s) 826
NdeII GATC 5 cut(s) 369, 556, 951, 972, 1079
NlaIII CATG 6 cut(s) 805, 815, 1272, 1292, 1406, 1419
NlaIV GGNNCC 1 cut(s) 809
NmuCI GTSAC 2 cut(s) 494, 694
NsiI ATGCAT 1 cut(s) 553
NspI RCATGY 3 cut(s) 805, 1272, 1406
PceI AGGCCT 1 cut(s) 1016
PciI ACATGT 2 cut(s) 801, 1268
PctI GAATGC 2 cut(s) 52, 1414
PdmI GAANNNNTTC 3 cut(s) 414, 468, 523
PfeI GAWTC 4 cut(s) 152, 600, 635, 1285
PflMI CCANNNNNTGG 1 cut(s) 58
PfoI TCCNGGA 1 cut(s) 135
PkrI GCNGC 9 cut(s) 36, 123, 275, 352, 490, 624, 823, 1218, 1414
PleI GAGTC 1 cut(s) 884
PpsI GAGTC 1 cut(s) 884
PscI ACATGT 2 cut(s) 801, 1268
PshBI ATTAAT 1 cut(s) 1152
Psp124BI GAGCTC 1 cut(s) 1384
Psp6I CCWGG 2 cut(s) 217, 975
PspEI GGTNACC 1 cut(s) 223
PspGI CCWGG 2 cut(s) 217, 975
PspN4I GGNNCC 1 cut(s) 809
PstNI CAGNNNCTG 1 cut(s) 982
PvuII CAGCTG 1 cut(s) 333
RsaI GTAC 4 cut(s) 257, 669, 739, 857
RsaNI GTAC 4 cut(s) 256, 668, 738, 856
RseI CAYNNNNRTG 3 cut(s) 816, 913, 1407
SacI GAGCTC 1 cut(s) 1384
SacII CCGCGG 1 cut(s) 1217
SaqAI TTAA 7 cut(s) 314, 399, 672, 707, 897, 1085, 1152
SatI GCNGC 9 cut(s) 35, 122, 274, 351, 489, 623, 822, 1217, 1413
Sau3AI GATC 5 cut(s) 369, 556, 951, 972, 1079
SchI GAGTC 1 cut(s) 884
ScrFI CCNGG 5 cut(s) 126, 137, 219, 977, 1318
SduI GDGCHC 3 cut(s) 242, 948, 1384
SfaNI GCATC 4 cut(s) 16, 560, 808, 1291
Sfr303I CCGCGG 1 cut(s) 1217
SgrBI CCGCGG 1 cut(s) 1217
SmiMI CAYNNNNRTG 3 cut(s) 816, 913, 1407
SmlI CTYRAG 3 cut(s) 530, 1020, 1185
SmoI CTYRAG 3 cut(s) 530, 1020, 1185
Sse9I AATT 8 cut(s) 97, 244, 413, 523, 613, 646, 708, 1153
SseBI AGGCCT 1 cut(s) 1016
SsiI CCGC 3 cut(s) 859, 1214, 1216
SspMI CTAG 1 cut(s) 770
SstI GAGCTC 1 cut(s) 1384
StuI AGGCCT 1 cut(s) 1016
StyD4I CCNGG 5 cut(s) 124, 135, 217, 975, 1316
TaaI ACNGT 3 cut(s) 733, 938, 1342
TaiI ACGT 3 cut(s) 696, 1072, 1369
TasI AATT 8 cut(s) 97, 244, 413, 523, 613, 646, 708, 1153
TatI WGTACW 1 cut(s) 667
TauI GCSGC 1 cut(s) 1219
TfiI GAWTC 4 cut(s) 152, 600, 635, 1285
Tru1I TTAA 7 cut(s) 314, 399, 672, 707, 897, 1085, 1152
Tru9I TTAA 7 cut(s) 314, 399, 672, 707, 897, 1085, 1152
TscAI CASTG 2 cut(s) 706, 948
TseFI GTSAC 2 cut(s) 494, 694
TseI GCWGC 8 cut(s) 34, 121, 273, 350, 488, 622, 821, 1412
Tsp45I GTSAC 2 cut(s) 494, 694
TspDTI ATGAA 4 cut(s) 58, 690, 735, 1215
TspGWI ACGGA 1 cut(s) 1229
TspRI CASTG 2 cut(s) 706, 948
Van91I CCANNNNNTGG 1 cut(s) 58
VspI ATTAAT 1 cut(s) 1152
XapI RAATTY 4 cut(s) 97, 244, 413, 523
XceI RCATGY 3 cut(s) 805, 1272, 1406
XcmI CCANNNNNNNNNTGG 1 cut(s) 869
XmiI GTMKAC 1 cut(s) 986
XmnI GAANNNNTTC 3 cut(s) 414, 468, 523
XspI CTAG 1 cut(s) 770
ZraI GACGTC 2 cut(s) 694, 1070
Zsp2I ATGCAT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.