Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008766

Physical Location & Seq

Genomic Coordinates Reverse (-)

19958891 .. 19962669

Gene Structure 3779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012571

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGAGGGTGGATTGAAGCCAATGGATGCAGAGCAGCTCAGAGAGAATGCTCACAAGATGGTGGATTTCATAGCTGATTACTACAAGACCATTGAGGAATTCCCTGTTCTCAGCCAAGTTCAGCCTGGATATCTCCGTGAACTTCTACCTGATTCTGCGCCTACTCAACCCGAATCTTTGCAACATATTTTTGATGATATTCAGGCTAAGATACTACCAGGGGTGACCCACTGGCAGAGCCCAAACTTCTTTGCTTATTATCCTTCTAATAGCAGCATTGCCGGATTTTTGGGAGAGATGCTCAGTGCTGGTCTTAACATTGTGGGTTTTAGTTGGGTAACTTCTCCTGCAGCTACAGAACTCGAAATGATTGTTCTTGATTGGCTCGCCAAATTGATTAAACTTCCCGACGAGTTTCTTTCAGCAGGACAAGGTGGTGGTGTGATACAAGGCACTGCAAGTGAAGCTGTTCTAGTTGTGATCCTGGCTGCTCGTGATAAGATTTTGAGAAGGGTAGGGAAAAATGTCCTTGAGAAGCTTGTTGTTTATGCATCTGATCAAACACATTCAGCTTTGCAGAAAGCCTGTCAGATAGCGGGAATCCATCCTGAGAATTGCAGGACGCTGAGTACCGACTCAACTACTAATTATGCTCTTTCGCCCAGTGTACTTAATGAAGCAATTTCAAATGACATCACCAATGGTTTAATTCCTTTTTTCTTATGTGGAACAGTTGGTACTACTTCTTCAACAGCGGTTGATCCTTTGGGAGAACTGGGAAAGATTGCCAAGAGCAACGAAATGTGGTTCCATGTGGATGCTGCATATGCTGGTAGTGCCTGTATATGTCCAGAATACCGCCACTACATTGATGGTGTTGAGAAAGCAGACTCATTTAACATGAATGCACACAAATGGTTTCTCACAAACTTTGATTGTTCGGTGCTTTGGATCAAGGATAGAAATGCTTTGGTCCAGGCCCTGTCTACAAATCCTGAGTTCCTGAAAAACAAGTCATCTGAAGCAAACATGGTTGTGGATTACAAAGATTGGCAAGTTCCACTTGGACGTCGGTTTAGATCATTGAAGCTATGGATGGTGTTACGACTTTATGGTTTGGAGAACCTCCAGTCCTACATAAGAAACCATATCAATTTGGCCAAAAAATTTGAAGAGCTTGTTGCTCAAGACCCTAGGTTTGAGATTGTTACTCCAAGACTTTATTCGTTAGTTTGTTTCCGCCTTCTGCCCCCTCATGGAAATGAGGCCCGTGCGAGCAAAGTGAACCATGACCTATTAGATGCTGTAAATTCAACAGGGAAGATTTTCATTTCTCACACGGTCCTGTCTGGTATATACATATTACGTTTTGCAGTAGGAGCTCCATTGACTGAGGAGAAGCATGTGAATGCAGCATGGAAGGTTTTGCAAGATGAGGCCTCTGCACTGCTAGCAACCTCTTTAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006082 GO:0006520 GO:0006558 GO:0006559 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009611 GO:0009987 GO:0016054 GO:0017144 GO:0019439 GO:0019752 GO:0042737 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0046395 GO:0050896 GO:0071704 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1902221 GO:1902222 GO:1990055

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00380 ko00901 ko00950 ko00965 ko01100 ko01110 ko04726 ko04728 ko05030 ko05031 ko05034 map00350 map00360 map00380 map00901 map00950 map00965 map01100 map01110 map04726 map04728 map05030 map05031 map05034

Pfam Domains

Protein Families

Pyridoxal_deC

Protein Analysis

490

Amino Acids

54.19

Weight (kDa)

5.75

Isoelectric Point (pI)

40.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyridoxal_deC	PF00282	42 - 415	1.7e-125	Pyridoxal-dependent decarboxylase conserved domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20340 AT2G20340
fragaria_vesca	FvH4_2g20320 FvH4_2g20320 FvH4_2g20320 FvH4_2g20320 FvH4_2g20320 FvH4_2g20320
malus_domestica	MD10G1175100.v1.1
prunus_persica	Prupe.8G214500_v2.0.a1 Prupe.8G214500_v2.0.a1
pyrus_communis	pycom10g15090
rosa_chinensis	RchiOBHm_Chr6g0286451
rosa_laevigata	RLG00000012571
rosa_multiflora	Rmu_sc0019236.1_g000003 Rmu_ssc0000268.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182350
rosa_rugosa	Rorug06G0179400 Rorug06G0179600
rosa_samantha	Rh6BG295600 Rh6CG296300 Rh6DG288100
rosa_wichuraiana	Rw6G025180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1072
AccI	GTMKAC	1 cut(s)	986
AciI	CCGC	4 cut(s)	596, 755, 859, 1240
AclWI	GGATC	3 cut(s)	475, 755, 959
AcoI	YGGCCR	1 cut(s)	1158
AcsI	RAATTY	3 cut(s)	98, 1166, 1309
AcuI	CTGAAG	1 cut(s)	1041
AcyI	GRCGYC	1 cut(s)	1069
AfaI	GTAC	3 cut(s)	631, 669, 739
AfiI	CCNNNNNNNGG	1 cut(s)	1256
AgsI	TTSAA	6 cut(s)	16, 687, 750, 1087, 1172, 1314
AjnI	CCWGG	4 cut(s)	124, 217, 483, 975
AjuI	GAANNNNNNNTTGG	2 cut(s)	1207, 1239
AloI	GAACNNNNNNTCC	2 cut(s)	1115, 1147
AluBI	AGCT	9 cut(s)	37, 74, 353, 467, 538, 572, 1090, 1177, 1382
AluI	AGCT	9 cut(s)	37, 74, 353, 467, 538, 572, 1090, 1177, 1382
Alw21I	GWGCWC	1 cut(s)	1384
AlwI	GGATC	3 cut(s)	475, 755, 959
AlwNI	CAGNNNCTG	1 cut(s)	982
AoxI	GGCC	4 cut(s)	978, 1158, 1266, 1437
ApeKI	GCWGC	6 cut(s)	34, 273, 350, 488, 821, 1412
ApoI	RAATTY	3 cut(s)	98, 1166, 1309
ArsI	GACNNNNNNTTYG	2 cut(s)	1181, 1213
Asp700I	GAANNNNTTC	2 cut(s)	468, 1325
AspA2I	CCTAGG	1 cut(s)	1193
AspLEI	GCGC	1 cut(s)	160
AspS9I	GGNCC	4 cut(s)	973, 979, 1267, 1342
AsuHPI	GGTGA	2 cut(s)	235, 688
AsuNHI	GCTAGC	1 cut(s)	1450
AvaII	GGWCC	2 cut(s)	973, 1342
AvrII	CCTAGG	1 cut(s)	1193
BalI	TGGCCA	1 cut(s)	1160
BanII	GRGCYC	2 cut(s)	242, 1384
BarI	GAAGNNNNNNTAC	2 cut(s)	730, 762
BauI	CACGAG	1 cut(s)	492
Bbv12I	GWGCWC	1 cut(s)	1384
BbvI	GCAGC	6 cut(s)	46, 285, 362, 475, 808, 1424
BccI	CCATC	4 cut(s)	52, 612, 866, 1090
BciT130I	CCWGG	4 cut(s)	126, 219, 485, 977
BclI	TGATCA	1 cut(s)	556
BfaI	CTAG	3 cut(s)	473, 1194, 1451
BfmI	CTRYAG	2 cut(s)	348, 354
BisI	GCNGC	6 cut(s)	35, 274, 351, 489, 822, 1413
BlnI	CCTAGG	1 cut(s)	1193
BlsI	GCNGC	6 cut(s)	36, 275, 352, 490, 823, 1414
Bme1390I	CCNGG	4 cut(s)	126, 219, 485, 977
Bme18I	GGWCC	2 cut(s)	973, 1342
BmgT120I	GGNCC	4 cut(s)	973, 979, 1267, 1342
BmiI	GGNNCC	1 cut(s)	809
BmrFI	CCNGG	4 cut(s)	126, 219, 485, 977
BmrI	ACTGGG	2 cut(s)	657, 785
BmsI	GCATC	5 cut(s)	16, 288, 560, 808, 1291
BmtI	GCTAGC	1 cut(s)	1454
BmuI	ACTGGG	2 cut(s)	657, 785
BplI	GAGNNNNNCTC	2 cut(s)	285, 317
BpmI	CTGGAG	1 cut(s)	1112
BpuEI	CTTGAG	2 cut(s)	551, 1170
BsaHI	GRCGYC	1 cut(s)	1069
BsaJI	CCNNGG	2 cut(s)	218, 1193
Bsc4I	CCNNNNNNNGG	1 cut(s)	1256
Bse1I	ACTGG	4 cut(s)	236, 663, 780, 1129
Bse3DI	GCAATG	1 cut(s)	276
BseBI	CCWGG	4 cut(s)	126, 219, 485, 977
BseDI	CCNNGG	2 cut(s)	218, 1193
BseGI	GGATG	4 cut(s)	31, 604, 823, 1101
BseLI	CCNNNNNNNGG	1 cut(s)	1256
BseMI	GCAATG	1 cut(s)	276
BseMII	CTCAG	7 cut(s)	52, 124, 316, 600, 617, 987, 1383
BseNI	ACTGG	4 cut(s)	236, 663, 780, 1129
BseRI	GAGGAG	1 cut(s)	1409
BseXI	GCAGC	6 cut(s)	46, 285, 362, 475, 808, 1424
BsgI	GTGCAG	1 cut(s)	1428
BshFI	GGCC	4 cut(s)	980, 1160, 1268, 1439
BsiHKAI	GWGCWC	1 cut(s)	1384
BsiSI	CCGG	1 cut(s)	282
BslI	CCNNNNNNNGG	1 cut(s)	1256
BsmI	GAATGC	3 cut(s)	52, 910, 1414
BsnI	GGCC	4 cut(s)	980, 1160, 1268, 1439
Bsp1286I	GDGCHC	2 cut(s)	242, 1384
Bsp143I	GATC	5 cut(s)	480, 556, 760, 951, 1079
BspACI	CCGC	4 cut(s)	596, 755, 859, 1240
BspANI	GGCC	4 cut(s)	980, 1160, 1268, 1439
BspCNI	CTCAG	7 cut(s)	51, 123, 315, 601, 618, 988, 1384
BspLI	GGNNCC	1 cut(s)	809
BspMAI	CTGCAG	1 cut(s)	352
BspOI	GCTAGC	1 cut(s)	1454
BspPI	GGATC	3 cut(s)	475, 755, 959
BspQI	GCTCTTC	1 cut(s)	1167
BsrDI	GCAATG	1 cut(s)	276
BsrI	ACTGG	4 cut(s)	236, 663, 780, 1129
BssECI	CCNNGG	2 cut(s)	218, 1193
BssMI	GATC	5 cut(s)	480, 556, 760, 951, 1079
BssNI	GRCGYC	1 cut(s)	1069
BssSI	CACGAG	1 cut(s)	492
BssT1I	CCWWGG	1 cut(s)	1193
Bst2BI	CACGAG	1 cut(s)	492
Bst2UI	CCWGG	4 cut(s)	126, 219, 485, 977
Bst4CI	ACNGT	2 cut(s)	733, 1342
Bst6I	CTCTTC	1 cut(s)	1167
BstACI	GRCGYC	1 cut(s)	1069
BstC8I	GCNNGC	3 cut(s)	387, 1276, 1452
BstDEI	CTNAG	8 cut(s)	38, 110, 207, 302, 609, 626, 996, 1392
BstEII	GGTNACC	1 cut(s)	223
BstF5I	GGATG	4 cut(s)	31, 604, 823, 1101
BstHHI	GCGC	1 cut(s)	160
BstKTI	GATC	5 cut(s)	483, 559, 763, 954, 1082
BstMBI	GATC	5 cut(s)	480, 556, 760, 951, 1079
BstMWI	GCNNNNNNNGC	5 cut(s)	464, 827, 836, 1379, 1451
BstNI	CCWGG	4 cut(s)	126, 219, 485, 977
BstNSI	RCATGY	1 cut(s)	1406
BstPI	GGTNACC	1 cut(s)	223
BstSCI	CCNGG	4 cut(s)	124, 217, 483, 975
BstSFI	CTRYAG	2 cut(s)	348, 354
BstV1I	GCAGC	6 cut(s)	46, 285, 362, 475, 808, 1424
BsuRI	GGCC	4 cut(s)	980, 1160, 1268, 1439
BtsCI	GGATG	4 cut(s)	31, 604, 823, 1101
BtsI	GCAGTG	2 cut(s)	453, 1445
BtsIMutI	CAGTG	5 cut(s)	229, 310, 453, 670, 1445
Cac8I	GCNNGC	3 cut(s)	387, 1276, 1452
CaiI	CAGNNNCTG	1 cut(s)	982
CfoI	GCGC	1 cut(s)	160
Cfr13I	GGNCC	4 cut(s)	973, 979, 1267, 1342
CseI	GACGC	1 cut(s)	631
Csp6I	GTAC	3 cut(s)	630, 668, 738
CviAII	CATG	7 cut(s)	812, 901, 1030, 1256, 1289, 1403, 1416
CviQI	GTAC	3 cut(s)	630, 668, 738
DdeI	CTNAG	8 cut(s)	38, 110, 207, 302, 609, 626, 996, 1392
DpnI	GATC	5 cut(s)	482, 558, 762, 953, 1081
DpnII	GATC	5 cut(s)	480, 556, 760, 951, 1079
EaeI	YGGCCR	1 cut(s)	1158
Eam1104I	CTCTTC	1 cut(s)	1167
EarI	CTCTTC	1 cut(s)	1167
EciI	GGCGGA	1 cut(s)	1229
Ecl136II	GAGCTC	1 cut(s)	1382
Eco130I	CCWWGG	1 cut(s)	1193
Eco147I	AGGCCT	1 cut(s)	1439
Eco24I	GRGCYC	2 cut(s)	242, 1384
Eco32I	GATATC	1 cut(s)	131
Eco47I	GGWCC	2 cut(s)	973, 1342
Eco53kI	GAGCTC	1 cut(s)	1382
Eco57I	CTGAAG	1 cut(s)	1041
Eco91I	GGTNACC	1 cut(s)	223
EcoICRI	GAGCTC	1 cut(s)	1382
EcoO109I	RGGNCCY	1 cut(s)	979
EcoO65I	GGTNACC	1 cut(s)	223
EcoRI	GAATTC	1 cut(s)	98
EcoRII	CCWGG	4 cut(s)	124, 217, 483, 975
EcoRV	GATATC	1 cut(s)	131
EcoT14I	CCWWGG	1 cut(s)	1193
EcoT22I	ATGCAT	1 cut(s)	553
EcoT38I	GRGCYC	2 cut(s)	242, 1384
ErhI	CCWWGG	1 cut(s)	1193
FaeI	CATG	7 cut(s)	815, 904, 1033, 1259, 1292, 1406, 1419
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FatI	CATG	7 cut(s)	811, 900, 1029, 1255, 1288, 1402, 1415
FauI	CCCGC	1 cut(s)	589
FauNDI	CATATG	1 cut(s)	826
FbaI	TGATCA	1 cut(s)	556
FblI	GTMKAC	1 cut(s)	986
Fnu4HI	GCNGC	6 cut(s)	35, 274, 351, 489, 822, 1413
FokI	GGATG	4 cut(s)	38, 591, 830, 1108
FriOI	GRGCYC	2 cut(s)	242, 1384
Fsp4HI	GCNGC	6 cut(s)	35, 274, 351, 489, 822, 1413
FspBI	CTAG	3 cut(s)	473, 1194, 1451
GlaI	GCGC	1 cut(s)	159
GluI	GCNGC	6 cut(s)	35, 274, 351, 489, 822, 1413
GsuI	CTGGAG	1 cut(s)	1112
HaeIII	GGCC	4 cut(s)	980, 1160, 1268, 1439
HapII	CCGG	1 cut(s)	282
HgaI	GACGC	1 cut(s)	631
HhaI	GCGC	1 cut(s)	160
Hin1I	GRCGYC	1 cut(s)	1069
Hin1II	CATG	7 cut(s)	815, 904, 1033, 1259, 1292, 1406, 1419
Hin6I	GCGC	1 cut(s)	158
HinP1I	GCGC	1 cut(s)	158
HindIII	AAGCTT	1 cut(s)	536
HinfI	GANTC	5 cut(s)	152, 173, 600, 635, 890
HpaII	CCGG	1 cut(s)	282
HphI	GGTGA	2 cut(s)	235, 688
Hpy166II	GTNNAC	4 cut(s)	140, 668, 987, 1285
Hpy188I	TCNGA	4 cut(s)	41, 556, 591, 1021
Hpy188III	TCNNGA	8 cut(s)	377, 407, 494, 608, 851, 995, 1003, 1187
Hpy8I	GTNNAC	4 cut(s)	140, 668, 987, 1285
Hpy99I	CGWCG	2 cut(s)	413, 1074
HpyAV	CCTTC	4 cut(s)	273, 504, 1253, 1414
HpyCH4III	ACNGT	2 cut(s)	733, 1342
HpyCH4IV	ACGT	2 cut(s)	1069, 1366
HpyF10VI	GCNNNNNNNGC	5 cut(s)	464, 827, 836, 1379, 1451
HpyF3I	CTNAG	8 cut(s)	38, 110, 207, 302, 609, 626, 996, 1392
HpySE526I	ACGT	2 cut(s)	1069, 1366
Hsp92I	GRCGYC	1 cut(s)	1069
Hsp92II	CATG	7 cut(s)	815, 904, 1033, 1259, 1292, 1406, 1419
HspAI	GCGC	1 cut(s)	158
Ksp22I	TGATCA	1 cut(s)	556
Kzo9I	GATC	5 cut(s)	480, 556, 760, 951, 1079
LguI	GCTCTTC	1 cut(s)	1167
LmnI	GCTCC	2 cut(s)	1379, 1387
Lsp1109I	GCAGC	6 cut(s)	46, 285, 362, 475, 808, 1424
LweI	GCATC	5 cut(s)	16, 288, 560, 808, 1291
MaeI	CTAG	3 cut(s)	473, 1194, 1451
MaeII	ACGT	2 cut(s)	1069, 1366
MaeIII	GTNAC	4 cut(s)	223, 337, 1101, 1207
MalI	GATC	5 cut(s)	482, 558, 762, 953, 1081
MboI	GATC	5 cut(s)	480, 556, 760, 951, 1079
MboII	GAAGA	3 cut(s)	738, 1184, 1333
MhlI	GDGCHC	2 cut(s)	242, 1384
MlsI	TGGCCA	1 cut(s)	1160
MluCI	AATT	9 cut(s)	98, 392, 613, 646, 681, 708, 1153, 1166, 1309
MluNI	TGGCCA	1 cut(s)	1160
MlyI	GAGTC	2 cut(s)	629, 884
MnlI	CCTC	8 cut(s)	88, 1136, 1258, 1263, 1387, 1429, 1450, 1468
Mox20I	TGGCCA	1 cut(s)	1160
Mph1103I	ATGCAT	1 cut(s)	553
MroXI	GAANNNNTTC	2 cut(s)	468, 1325
MscI	TGGCCA	1 cut(s)	1160
MseI	TTAA	5 cut(s)	315, 399, 672, 707, 897
MslI	CAYNNNNRTG	5 cut(s)	816, 913, 1034, 1260, 1407
Msp20I	TGGCCA	1 cut(s)	1160
MspA1I	CMGCKG	1 cut(s)	755
MspI	CCGG	1 cut(s)	282
MspR9I	CCNGG	4 cut(s)	126, 219, 485, 977
Mva1269I	GAATGC	3 cut(s)	52, 910, 1414
MvaI	CCWGG	4 cut(s)	126, 219, 485, 977
MwoI	GCNNNNNNNGC	5 cut(s)	464, 827, 836, 1379, 1451
NdeI	CATATG	1 cut(s)	826
NdeII	GATC	5 cut(s)	480, 556, 760, 951, 1079
NheI	GCTAGC	1 cut(s)	1450
NlaIII	CATG	7 cut(s)	815, 904, 1033, 1259, 1292, 1406, 1419
NlaIV	GGNNCC	1 cut(s)	809
NmuCI	GTSAC	1 cut(s)	223
NsiI	ATGCAT	1 cut(s)	553
NspI	RCATGY	1 cut(s)	1406
PceI	AGGCCT	1 cut(s)	1439
PciSI	GCTCTTC	1 cut(s)	1167
PctI	GAATGC	3 cut(s)	52, 910, 1414
PdmI	GAANNNNTTC	2 cut(s)	468, 1325
PfeI	GAWTC	3 cut(s)	152, 173, 600
PkrI	GCNGC	6 cut(s)	36, 275, 352, 490, 823, 1414
PleI	GAGTC	2 cut(s)	629, 884
PpsI	GAGTC	2 cut(s)	629, 884
Psp124BI	GAGCTC	1 cut(s)	1384
Psp6I	CCWGG	4 cut(s)	124, 217, 483, 975
PspEI	GGTNACC	1 cut(s)	223
PspGI	CCWGG	4 cut(s)	124, 217, 483, 975
PspN4I	GGNNCC	1 cut(s)	809
PspPI	GGNCC	4 cut(s)	973, 979, 1267, 1342
PsrI	GAACNNNNNNTAC	2 cut(s)	721, 753
PstI	CTGCAG	1 cut(s)	352
PstNI	CAGNNNCTG	1 cut(s)	982
RsaI	GTAC	3 cut(s)	631, 669, 739
RsaNI	GTAC	3 cut(s)	630, 668, 738
RseI	CAYNNNNRTG	5 cut(s)	816, 913, 1034, 1260, 1407
SacI	GAGCTC	1 cut(s)	1384
SapI	GCTCTTC	1 cut(s)	1167
SaqAI	TTAA	5 cut(s)	315, 399, 672, 707, 897
SatI	GCNGC	6 cut(s)	35, 274, 351, 489, 822, 1413
Sau3AI	GATC	5 cut(s)	480, 556, 760, 951, 1079
Sau96I	GGNCC	4 cut(s)	973, 979, 1267, 1342
SchI	GAGTC	2 cut(s)	629, 884
ScrFI	CCNGG	4 cut(s)	126, 219, 485, 977
SduI	GDGCHC	2 cut(s)	242, 1384
SfaNI	GCATC	5 cut(s)	16, 288, 560, 808, 1291
SfcI	CTRYAG	2 cut(s)	348, 354
SinI	GGWCC	2 cut(s)	973, 1342
SmiMI	CAYNNNNRTG	5 cut(s)	816, 913, 1034, 1260, 1407
SmlI	CTYRAG	2 cut(s)	530, 1185
SmoI	CTYRAG	2 cut(s)	530, 1185
Sse9I	AATT	9 cut(s)	98, 392, 613, 646, 681, 708, 1153, 1166, 1309
SseBI	AGGCCT	1 cut(s)	1439
SsiI	CCGC	4 cut(s)	596, 755, 859, 1240
SspMI	CTAG	3 cut(s)	473, 1194, 1451
SstI	GAGCTC	1 cut(s)	1384
StuI	AGGCCT	1 cut(s)	1439
StyD4I	CCNGG	4 cut(s)	124, 217, 483, 975
StyI	CCWWGG	1 cut(s)	1193
TaaI	ACNGT	2 cut(s)	733, 1342
TaiI	ACGT	2 cut(s)	1072, 1369
TaqI	TCGA	1 cut(s)	363
TasI	AATT	9 cut(s)	98, 392, 613, 646, 681, 708, 1153, 1166, 1309
TatI	WGTACW	1 cut(s)	667
TfiI	GAWTC	3 cut(s)	152, 173, 600
Tru1I	TTAA	5 cut(s)	315, 399, 672, 707, 897
Tru9I	TTAA	5 cut(s)	315, 399, 672, 707, 897
TscAI	CASTG	5 cut(s)	236, 310, 460, 670, 1452
TseFI	GTSAC	1 cut(s)	223
TseI	GCWGC	6 cut(s)	34, 273, 350, 488, 821, 1412
Tsp45I	GTSAC	1 cut(s)	223
TspDTI	ATGAA	4 cut(s)	58, 690, 917, 1318
TspGWI	ACGGA	1 cut(s)	125
TspRI	CASTG	5 cut(s)	236, 310, 460, 670, 1452
VpaK11BI	GGWCC	2 cut(s)	973, 1342
XapI	RAATTY	3 cut(s)	98, 1166, 1309
XceI	RCATGY	1 cut(s)	1406
XcmI	CCANNNNNNNNNTGG	2 cut(s)	122, 869
XmaJI	CCTAGG	1 cut(s)	1193
XmiI	GTMKAC	1 cut(s)	986
XmnI	GAANNNNTTC	2 cut(s)	468, 1325
XspI	CTAG	3 cut(s)	473, 1194, 1451
ZraI	GACGTC	1 cut(s)	1070
Zsp2I	ATGCAT	1 cut(s)	553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.