Prupe.8G253700_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21709460 .. 21710879
1420 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G253700.1

Sequence Viewer

Length: 1332 bp
ATGGAACTCATCCATGTGGACTCGCCGGCATCACCTCTCTATCCGGGAAATATTTCTTATGAAGAAGAAATCCAAAGACTCATAGACCGATCCATTGCCCGAGCTCAACACCTTCATTACACCTTGGCATCCCTCGGTAACAATAATGTGTCACAAACTATAATCAACCCTCTTGACATTCGTCCGAAACTTGAATTTCACCCTTACGGCTCTTACCTTGTACAAGTTGGGATTGGGACTTTTGATGCAACTCTCCCGCCACGGTCATTAAATACATACTACTTGTACACCGACACTGGAAGCATCCTCACATGGGTGCTGTGCGAGGATTGTCTCAAGCCTGGAAACCAATGCTTTCAAACCAAAGAACCCCCTTTCCCTAACAGCAAGTCCAAATCTTATGTTGCTCTCTGTTGCAATCAAAACCCGTTTTGCAAGACAGGCCAATGCACCGGTCCTTACTGCTCCCAGCACGATGAGTACATGGACGGCACCGTTGTCAATTCTATTCTTTCAGCTGAAAATTTCAACTTTTTGTCAAGCAGTGGGCAGCCACTGATGATTCCAGGCGTAGTGTTTGGTTGTGCTTATGACACCAGGAAAATCAGTTTTGGAAGGCTGGAAGAGTTCAAGGTTGCAGGAATATTGGGTTTGGGATATGCTCCGATTTCCTTTCCACTGCAACAATCCTATCAAACTGGTAAAGTATTCTCAATGTGCCTAACACGCCAAAGAGGGATCCAAACATATCTCAGATTTGGTAAGGACGTCCCCACACCACCAGGTGGTCTGCGTGTCACCAAATTAGTGTTCTTCAAAGACGTACCATATTACTACGTCAATCTGTTGGCCATAAGTGTGCATGGACAAAAGCTTCTCATAGACCCAAATGTGTTTGCTGTACGAAATCAGGGCACAAGTGGCGGCTGCATCATGGACAATGGTAGCTCATTTACTTTTCTCATCAGGCCTGCTTTTAATGCTGTGGTTCAGTTTCTGGAGATGTATTTCATGCGCTTTCCTCGCCTTTTTAAGGGTGGTAGGCCTCTTGGGCTCCCTTTTGAACTTTGCTACAAATGGATGACGCCGCTGCCACCTCTGCCTACTTTGACATTTCACTTTGAAAATGCTGACCTTGTGATCAACCCACAGGAGTTATTCATAAAGGTGCATGCTGAGCAGCAGGGGAACTATCTCTTATGTTTGGCCTTCTTCGCCGACGATGCTCGTACTATTCTTGGATCAGTGCACCAATCCAATTACTTATTCATATATGATCTTAACCAGAAGCTGTTGAAGTTTGCTCCTGAGGATTGTTCTAAGAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

444

Amino Acids

49.82

Weight (kDa)

7.48

Isoelectric Point (pI)

36.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021208)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 771
AccB1I GGYRCC 1 cut(s) 491
AccB7I CCANNNNNTGG 1 cut(s) 785
AciI CCGC 3 cut(s) 257, 924, 1088
AclWI GGATC 4 cut(s) 84, 733, 746, 1249
AcoI YGGCCR 1 cut(s) 849
AcsI RAATTY 3 cut(s) 194, 523, 1324
AcyI GRCGYC 2 cut(s) 768, 1085
AdeI CACNNNGTG 1 cut(s) 785
AfaI GTAC 6 cut(s) 222, 287, 482, 825, 903, 1231
AfiI CCNNNNNNNGG 3 cut(s) 313, 785, 1033
AgeI ACCGGT 1 cut(s) 452
AgsI TTSAA 8 cut(s) 194, 359, 529, 631, 817, 1064, 1124, 1297
AjnI CCWGG 4 cut(s) 340, 565, 596, 781
AjuI GAANNNNNNNTTGG 4 cut(s) 794, 826, 1250, 1282
AleI CACNNNNGTG 1 cut(s) 314
AloI GAACNNNNNNTCC 2 cut(s) 360, 392
AluBI AGCT 5 cut(s) 104, 518, 874, 948, 1291
AluI AGCT 5 cut(s) 104, 518, 874, 948, 1291
Alw21I GWGCWC 2 cut(s) 106, 1251
Alw26I GTCTC 1 cut(s) 338
Alw44I GTGCAC 1 cut(s) 1247
AlwI GGATC 4 cut(s) 84, 733, 746, 1249
AlwNI CAGNNNCTG 3 cut(s) 556, 997, 1291
Ama87I CYCGRG 1 cut(s) 99
AoxI GGCC 5 cut(s) 442, 849, 968, 1043, 1206
ApaLI GTGCAC 1 cut(s) 1247
ApeKI GCWGC 4 cut(s) 550, 927, 1090, 1180
ApoI RAATTY 3 cut(s) 194, 523, 1324
AsiGI ACCGGT 1 cut(s) 452
Asp700I GAANNNNTTC 1 cut(s) 52
AspLEI GCGC 1 cut(s) 1017
AspS9I GGNCC 1 cut(s) 455
AsuC2I CCSGG 1 cut(s) 45
AsuHPI GGTGA 3 cut(s) 24, 191, 790
AvaI CYCGRG 1 cut(s) 99
AvaII GGWCC 1 cut(s) 455
AxyI CCTNAGG 1 cut(s) 1308
BaeGI GKGCMC 2 cut(s) 917, 1251
BalI TGGCCA 1 cut(s) 851
BamHI GGATCC 1 cut(s) 738
BanI GGYRCC 1 cut(s) 491
BanII GRGCYC 2 cut(s) 106, 1056
Bbv12I GWGCWC 2 cut(s) 106, 1251
BbvI GCAGC 4 cut(s) 562, 914, 1077, 1192
BceAI ACGGC 2 cut(s) 223, 505
BciT130I CCWGG 4 cut(s) 342, 567, 598, 783
BclI TGATCA 1 cut(s) 1140
BcnI CCSGG 1 cut(s) 45
BcoDI GTCTC 1 cut(s) 338
BglI GCCNNNNNGGC 1 cut(s) 1051
BisI GCNGC 6 cut(s) 551, 925, 928, 1088, 1091, 1181
BlpI GCTNAGC 1 cut(s) 1176
BlsI GCNGC 6 cut(s) 552, 926, 929, 1089, 1092, 1182
Bme1390I CCNGG 5 cut(s) 45, 342, 567, 598, 783
Bme18I GGWCC 1 cut(s) 455
BmeT110I CYCGRG 1 cut(s) 99
BmgT120I GGNCC 1 cut(s) 455
BmiI GGNNCC 3 cut(s) 493, 740, 1055
BmrFI CCNGG 5 cut(s) 45, 342, 567, 598, 783
BmsI GCATC 6 cut(s) 38, 137, 235, 312, 939, 1213
BoxI GACNNNNGTC 1 cut(s) 180
BpmI CTGGAG 1 cut(s) 1019
Bpu1102I GCTNAGC 1 cut(s) 1176
BpuEI CTTGAG 1 cut(s) 320
BpuMI CCSGG 1 cut(s) 45
BsaHI GRCGYC 2 cut(s) 768, 1085
BsaJI CCNNGG 3 cut(s) 123, 133, 260
BsaWI WCCGGW 1 cut(s) 452
Bsc4I CCNNNNNNNGG 3 cut(s) 313, 785, 1033
Bse118I RCCGGY 2 cut(s) 25, 452
Bse1I ACTGG 2 cut(s) 301, 703
Bse21I CCTNAGG 1 cut(s) 1308
Bse3DI GCAATG 1 cut(s) 93
BseBI CCWGG 4 cut(s) 342, 567, 598, 783
BseDI CCNNGG 3 cut(s) 123, 133, 260
BseGI GGATG 4 cut(s) 9, 128, 303, 1086
BseLI CCNNNNNNNGG 3 cut(s) 313, 785, 1033
BseMI GCAATG 1 cut(s) 93
BseMII CTCAG 3 cut(s) 766, 1167, 1299
BseNI ACTGG 2 cut(s) 301, 703
BseSI GKGCMC 2 cut(s) 917, 1251
BseXI GCAGC 4 cut(s) 562, 914, 1077, 1192
BseYI CCCAGC 1 cut(s) 468
BshFI GGCC 5 cut(s) 444, 851, 970, 1045, 1208
BshNI GGYRCC 1 cut(s) 491
BshTI ACCGGT 1 cut(s) 452
BsiHKAI GWGCWC 2 cut(s) 106, 1251
BsiHKCI CYCGRG 1 cut(s) 99
BsiSI CCGG 3 cut(s) 26, 44, 453
BslFI GGGAC 2 cut(s) 250, 755
BslI CCNNNNNNNGG 3 cut(s) 313, 785, 1033
BsmAI GTCTC 1 cut(s) 338
BsmFI GGGAC 2 cut(s) 250, 755
BsnI GGCC 5 cut(s) 444, 851, 970, 1045, 1208
BsoBI CYCGRG 1 cut(s) 99
Bsp1286I GDGCHC 4 cut(s) 106, 917, 1056, 1251
Bsp1407I TGTACA 2 cut(s) 220, 285
Bsp143I GATC 5 cut(s) 89, 738, 1140, 1241, 1276
Bsp1720I GCTNAGC 1 cut(s) 1176
BspACI CCGC 3 cut(s) 257, 924, 1088
BspANI GGCC 5 cut(s) 444, 851, 970, 1045, 1208
BspCNI CTCAG 3 cut(s) 765, 1168, 1300
BspLI GGNNCC 3 cut(s) 493, 740, 1055
BspPI GGATC 4 cut(s) 84, 733, 746, 1249
BspT107I GGYRCC 1 cut(s) 491
BsrDI GCAATG 1 cut(s) 93
BsrFI RCCGGY 2 cut(s) 25, 452
BsrGI TGTACA 2 cut(s) 220, 285
BsrI ACTGG 2 cut(s) 301, 703
BssAI RCCGGY 2 cut(s) 25, 452
BssECI CCNNGG 3 cut(s) 123, 133, 260
BssMI GATC 5 cut(s) 89, 738, 1140, 1241, 1276
BssNI GRCGYC 2 cut(s) 768, 1085
BssT1I CCWWGG 1 cut(s) 123
Bst2UI CCWGG 4 cut(s) 342, 567, 598, 783
Bst4CI ACNGT 2 cut(s) 264, 496
Bst6I CTCTTC 1 cut(s) 618
BstACI GRCGYC 2 cut(s) 768, 1085
BstAUI TGTACA 2 cut(s) 220, 285
BstC8I GCNNGC 3 cut(s) 27, 972, 1173
BstDEI CTNAG 4 cut(s) 752, 1176, 1308, 1320
BstDSI CCRYGG 1 cut(s) 260
BstENI CCTNNNNNAGG 1 cut(s) 1031
BstF5I GGATG 4 cut(s) 9, 128, 303, 1086
BstHHI GCGC 1 cut(s) 1017
BstKTI GATC 5 cut(s) 92, 741, 1143, 1244, 1279
BstMAI GTCTC 1 cut(s) 338
BstMBI GATC 5 cut(s) 89, 738, 1140, 1241, 1276
BstNI CCWGG 4 cut(s) 342, 567, 598, 783
BstNSI RCATGY 1 cut(s) 1175
BstPAI GACNNNNGTC 1 cut(s) 180
BstSCI CCNGG 5 cut(s) 43, 340, 565, 596, 781
BstSLI GKGCMC 2 cut(s) 917, 1251
BstV1I GCAGC 4 cut(s) 562, 914, 1077, 1192
BstX2I RGATCY 1 cut(s) 738
BstYI RGATCY 1 cut(s) 738
Bsu36I CCTNAGG 1 cut(s) 1308
BsuRI GGCC 5 cut(s) 444, 851, 970, 1045, 1208
BtgI CCRYGG 1 cut(s) 260
BtsCI GGATG 4 cut(s) 9, 128, 303, 1086
BtsI GCAGTG 2 cut(s) 550, 677
BtsIMutI CAGTG 5 cut(s) 294, 550, 554, 677, 1251
Cac8I GCNNGC 3 cut(s) 27, 972, 1173
CaiI CAGNNNCTG 3 cut(s) 556, 997, 1291
CfoI GCGC 1 cut(s) 1017
Cfr10I RCCGGY 2 cut(s) 25, 452
Cfr13I GGNCC 1 cut(s) 455
CseI GACGC 1 cut(s) 1093
CsiI ACCWGGT 1 cut(s) 781
Csp6I GTAC 6 cut(s) 221, 286, 481, 824, 902, 1230
CspAI ACCGGT 1 cut(s) 452
CviAII CATG 7 cut(s) 14, 312, 484, 863, 934, 1012, 1172
CviQI GTAC 6 cut(s) 221, 286, 481, 824, 902, 1230
DdeI CTNAG 4 cut(s) 752, 1176, 1308, 1320
DpnI GATC 5 cut(s) 91, 740, 1142, 1243, 1278
DpnII GATC 5 cut(s) 89, 738, 1140, 1241, 1276
DraIII CACNNNGTG 1 cut(s) 785
EaeI YGGCCR 1 cut(s) 849
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Ecl136II GAGCTC 1 cut(s) 104
Eco130I CCWWGG 1 cut(s) 123
Eco147I AGGCCT 2 cut(s) 970, 1045
Eco24I GRGCYC 2 cut(s) 106, 1056
Eco47I GGWCC 1 cut(s) 455
Eco53kI GAGCTC 1 cut(s) 104
Eco81I CCTNAGG 1 cut(s) 1308
Eco88I CYCGRG 1 cut(s) 99
EcoICRI GAGCTC 1 cut(s) 104
EcoNI CCTNNNNNAGG 1 cut(s) 1031
EcoRI GAATTC 1 cut(s) 1324
EcoRII CCWGG 4 cut(s) 340, 565, 596, 781
EcoT14I CCWWGG 1 cut(s) 123
EcoT38I GRGCYC 2 cut(s) 106, 1056
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 7 cut(s) 17, 315, 487, 866, 937, 1015, 1175
FaqI GGGAC 2 cut(s) 250, 755
FatI CATG 7 cut(s) 13, 311, 483, 862, 933, 1011, 1171
FauI CCCGC 1 cut(s) 264
FbaI TGATCA 1 cut(s) 1140
Fnu4HI GCNGC 6 cut(s) 551, 925, 928, 1088, 1091, 1181
FokI GGATG 3 cut(s) 115, 290, 1093
FriOI GRGCYC 2 cut(s) 106, 1056
Fsp4HI GCNGC 6 cut(s) 551, 925, 928, 1088, 1091, 1181
GlaI GCGC 1 cut(s) 1016
GluI GCNGC 6 cut(s) 551, 925, 928, 1088, 1091, 1181
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 1 cut(s) 1019
HaeIII GGCC 5 cut(s) 444, 851, 970, 1045, 1208
HapII CCGG 3 cut(s) 26, 44, 453
HgaI GACGC 1 cut(s) 1093
HhaI GCGC 1 cut(s) 1017
Hin1I GRCGYC 2 cut(s) 768, 1085
Hin1II CATG 7 cut(s) 17, 315, 487, 866, 937, 1015, 1175
Hin6I GCGC 1 cut(s) 1015
HinP1I GCGC 1 cut(s) 1015
HindIII AAGCTT 1 cut(s) 872
HinfI GANTC 3 cut(s) 20, 78, 562
HpaII CCGG 3 cut(s) 26, 44, 453
HphI GGTGA 3 cut(s) 24, 191, 790
Hpy166II GTNNAC 3 cut(s) 19, 288, 1249
Hpy188I TCNGA 3 cut(s) 186, 666, 755
Hpy188III TCNNGA 4 cut(s) 173, 998, 1307, 1329
Hpy8I GTNNAC 3 cut(s) 19, 288, 1249
Hpy99I CGWCG 1 cut(s) 1223
HpyAV CCTTC 3 cut(s) 122, 609, 1219
HpyCH4III ACNGT 2 cut(s) 264, 496
HpyCH4IV ACGT 3 cut(s) 768, 822, 837
HpyF3I CTNAG 4 cut(s) 752, 1176, 1308, 1320
HpySE526I ACGT 3 cut(s) 768, 822, 837
Hsp92I GRCGYC 2 cut(s) 768, 1085
Hsp92II CATG 7 cut(s) 17, 315, 487, 866, 937, 1015, 1175
HspAI GCGC 1 cut(s) 1015
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
Ksp22I TGATCA 1 cut(s) 1140
Kzo9I GATC 5 cut(s) 89, 738, 1140, 1241, 1276
LmnI GCTCC 4 cut(s) 470, 667, 1059, 1309
Lsp1109I GCAGC 4 cut(s) 562, 914, 1077, 1192
LweI GCATC 6 cut(s) 38, 137, 235, 312, 939, 1213
MabI ACCWGGT 1 cut(s) 781
MaeII ACGT 3 cut(s) 768, 822, 837
MaeIII GTNAC 3 cut(s) 137, 150, 796
MalI GATC 5 cut(s) 91, 740, 1142, 1243, 1278
MboI GATC 5 cut(s) 89, 738, 1140, 1241, 1276
MboII GAAGA 5 cut(s) 74, 77, 635, 805, 1204
MflI RGATCY 1 cut(s) 738
MhlI GDGCHC 4 cut(s) 106, 917, 1056, 1251
MlsI TGGCCA 1 cut(s) 851
MluCI AATT 6 cut(s) 194, 502, 523, 803, 1258, 1324
MluNI TGGCCA 1 cut(s) 851
MlyI GAGTC 2 cut(s) 14, 72
Mox20I TGGCCA 1 cut(s) 851
MroNI GCCGGC 1 cut(s) 25
MroXI GAANNNNTTC 1 cut(s) 52
MscI TGGCCA 1 cut(s) 851
MseI TTAA 4 cut(s) 269, 978, 1032, 1281
MslI CAYNNNNRTG 4 cut(s) 14, 314, 857, 1166
Msp20I TGGCCA 1 cut(s) 851
MspA1I CMGCKG 2 cut(s) 518, 1090
MspI CCGG 3 cut(s) 26, 44, 453
MspR9I CCNGG 5 cut(s) 45, 342, 567, 598, 783
MvaI CCWGG 4 cut(s) 342, 567, 598, 783
NaeI GCCGGC 1 cut(s) 27
NciI CCSGG 1 cut(s) 45
NdeII GATC 5 cut(s) 89, 738, 1140, 1241, 1276
NgoMIV GCCGGC 1 cut(s) 25
NlaIII CATG 7 cut(s) 17, 315, 487, 866, 937, 1015, 1175
NlaIV GGNNCC 3 cut(s) 493, 740, 1055
NmuCI GTSAC 2 cut(s) 150, 796
NspI RCATGY 1 cut(s) 1175
OliI CACNNNNGTG 1 cut(s) 314
PaeI GCATGC 1 cut(s) 1175
PceI AGGCCT 2 cut(s) 970, 1045
PdiI GCCGGC 1 cut(s) 27
PdmI GAANNNNTTC 1 cut(s) 52
PfeI GAWTC 1 cut(s) 562
PflMI CCANNNNNTGG 1 cut(s) 785
PfoI TCCNGGA 1 cut(s) 43
PinAI ACCGGT 1 cut(s) 452
PkrI GCNGC 6 cut(s) 552, 926, 929, 1089, 1092, 1182
PleI GAGTC 2 cut(s) 14, 72
PpsI GAGTC 2 cut(s) 14, 72
PshAI GACNNNNGTC 1 cut(s) 180
Psp124BI GAGCTC 1 cut(s) 106
Psp6I CCWGG 4 cut(s) 340, 565, 596, 781
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 4 cut(s) 340, 565, 596, 781
PspN4I GGNNCC 3 cut(s) 493, 740, 1055
PspPI GGNCC 1 cut(s) 455
PstNI CAGNNNCTG 3 cut(s) 556, 997, 1291
PsuI RGATCY 1 cut(s) 738
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 6 cut(s) 222, 287, 482, 825, 903, 1231
RsaNI GTAC 6 cut(s) 221, 286, 481, 824, 902, 1230
RseI CAYNNNNRTG 4 cut(s) 14, 314, 857, 1166
SacI GAGCTC 1 cut(s) 106
SaqAI TTAA 4 cut(s) 269, 978, 1032, 1281
SatI GCNGC 6 cut(s) 551, 925, 928, 1088, 1091, 1181
Sau3AI GATC 5 cut(s) 89, 738, 1140, 1241, 1276
Sau96I GGNCC 1 cut(s) 455
SchI GAGTC 2 cut(s) 14, 72
ScrFI CCNGG 5 cut(s) 45, 342, 567, 598, 783
SduI GDGCHC 4 cut(s) 106, 917, 1056, 1251
SexAI ACCWGGT 1 cut(s) 781
SfaNI GCATC 6 cut(s) 38, 137, 235, 312, 939, 1213
SinI GGWCC 1 cut(s) 455
SmiMI CAYNNNNRTG 4 cut(s) 14, 314, 857, 1166
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
SphI GCATGC 1 cut(s) 1175
Sse9I AATT 6 cut(s) 194, 502, 523, 803, 1258, 1324
SseBI AGGCCT 2 cut(s) 970, 1045
SsiI CCGC 3 cut(s) 257, 924, 1088
SspI AATATT 2 cut(s) 52, 645
SstI GAGCTC 1 cut(s) 106
StuI AGGCCT 2 cut(s) 970, 1045
StyD4I CCNGG 5 cut(s) 43, 340, 565, 596, 781
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 2 cut(s) 264, 496
TaiI ACGT 3 cut(s) 771, 825, 840
TaqII GACCGA 1 cut(s) 102
TasI AATT 6 cut(s) 194, 502, 523, 803, 1258, 1324
TatI WGTACW 3 cut(s) 220, 285, 480
TauI GCSGC 2 cut(s) 927, 1090
TfiI GAWTC 1 cut(s) 562
Tru1I TTAA 4 cut(s) 269, 978, 1032, 1281
Tru9I TTAA 4 cut(s) 269, 978, 1032, 1281
TscAI CASTG 5 cut(s) 301, 550, 561, 684, 1251
TseFI GTSAC 2 cut(s) 150, 796
TseI GCWGC 4 cut(s) 550, 927, 1090, 1180
Tsp45I GTSAC 2 cut(s) 150, 796
TspDTI ATGAA 5 cut(s) 75, 104, 1000, 1150, 1258
TspRI CASTG 5 cut(s) 301, 550, 561, 684, 1251
Van91I CCANNNNNTGG 1 cut(s) 785
VneI GTGCAC 1 cut(s) 1247
VpaK11BI GGWCC 1 cut(s) 455
XagI CCTNNNNNAGG 1 cut(s) 1031
XapI RAATTY 3 cut(s) 194, 523, 1324
XceI RCATGY 1 cut(s) 1175
XmnI GAANNNNTTC 1 cut(s) 52
ZraI GACGTC 1 cut(s) 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.