Prupe.8G268300_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0018277
Physical Location & Seq
Forward (+)
22363702 .. 22366714
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G268300.4

Sequence Viewer

Length: 1587 bp
ATGCCTGCCTCCGCCAAATGGCTTGATGCCTTTACCCTTCAGTACATTTTTGTGCTGATTACACTATGCTCCCTCAGTTGTTGCAGCATGGGTATCCGAGGCCGAACTGATGGTGATCGCCTGAGAACAGTCTGGACCCCTGAAATGGATCGATATTTCATTGATCTCATGTTAGAGCAAGTTTGCAAAGGAAATAAATTTGATGATCATTTATTTAGCAAGCGAGCATGGAAGCATATGACATCCTTGTTTGATGCCAAGTTCAAGTTTCCATATGAAAAAGATGTTCTGAAAAATCGGCACAAAACACTAAGGAACTTGTACAAGGCTGTAAGGAATCTCCTTGATGAGAGGGGCTTCAGTTGGGATGAAATGCGACAAATGGTGACTGCTGATAATAATGTCTGGGATGAATATATCAAGGTACACCCAGATGCACGGTCATTCAGAATAAAAACCATCCCTTATTATCATGATTTGTGTTCGATATACGGTGACACAGCCATCGAAGAGAGAAGTGATAATATTCCCGAGGAGTCATCACATTCAGGTGAGAATGGTACAACTGCAGCCACACAGCCAAGGAGAGTTAGTCAGGGAACTGCCGAGACTCTTCAGGATATCATGGTTGGTGAAGATTATGGAGTCACTGTGCCAGCAAAGTCTTTTGATGATGTGGAGCATGCTATGACAAGTGTTCCTGGAATCACCACAAATAGTCGCTCCAGAACTTACTGGCAGCCACCCATGGACCGTTATTTCATTGAACTTATGCAAGAACAGGTGCGGAAAGGCAGCAGGATAGATGGTGTTTTCCGTAAACAAGCATGGATGGAGATGATTGCCTCATTCAATGCAAAGTTTGGCTTTAACTATGATATGGATGTTCTTAAAAATCGACACAAAACTCTGAAAAGGCAATATAATGTTATAAAGAATCTACTTGAATTGGATGGGTTTATCTGGGATGATGCGCGCCAAATGGTGACTGCTGATGATTATGTTTGGCAAGATTATATTAAGGAACATACTGATGCACGGCAGTTCATGACCCGGCCTGTCCCATATTATAAACACTTGTGCATGATATGTGATCCAAGTGTTGACGATAGAGACTCCTATTCAGGTCAAGATGTGGAGCAAGAAAATCAAGTTGAAGGCGCCAAGTTGTGTGGAGCATTAACTAGTTTTCTGTCTCCATCTACATCAGTTTCCACTGAAGATGAAGATGGTGATGTGCAGGAGTCAACCCCTATGTGCCAGAAGAAAAGGCGTCGACTAGAAGACTGCTCAAATGAGGCTTATCCAAAAAGATCACGAGAAGAAGATGGTGGCATGGCTAGTGCTCTTCGTGAGATGGCATCAGCAGTATCTTCGTTATCAGAGAAGAAGAGAAATGATGAGAAGTTGAACTCTGGGTCAATAGAAAGTGTGGTTGAAGCAGTACAAGCATTACCAGACATGGACGAAGACCTTGTGTTAGATGCATGTGATTTGCTAGAGGATGAAAAGAAGGCAAAAACATTCATGGCATTGGATGTTAAATTACGAAAGAAGTGGTTGATGAGGAAACTTCGACCACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

529

Amino Acids

61.12

Weight (kDa)

5.52

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 932, 1071
AccB1I GGYRCC 1 cut(s) 1160
AccI GTMKAC 1 cut(s) 1276
AccII CGCG 1 cut(s) 976
AciI CCGC 2 cut(s) 12, 787
AclWI GGATC 2 cut(s) 156, 1088
AcsI RAATTY 1 cut(s) 197
AcuI CTGAAG 4 cut(s) 23, 343, 599, 1239
AcyI GRCGYC 2 cut(s) 1161, 1273
AfaI GTAC 5 cut(s) 44, 323, 426, 562, 1446
AfiI CCNNNNNNNGG 2 cut(s) 18, 145
AgsI TTSAA 7 cut(s) 265, 767, 853, 947, 1157, 1411, 1439
AhlI ACTAGT 1 cut(s) 1184
AjnI CCWGG 1 cut(s) 700
Alw21I GWGCWC 1 cut(s) 1348
Alw26I GTCTC 3 cut(s) 602, 1107, 1200
AlwI GGATC 2 cut(s) 156, 1088
Ama87I CYCGRG 1 cut(s) 530
AoxI GGCC 2 cut(s) 100, 1055
ApeKI GCWGC 4 cut(s) 84, 569, 739, 795
ApoI RAATTY 1 cut(s) 197
AspLEI GCGC 3 cut(s) 976, 978, 1163
AspS9I GGNCC 2 cut(s) 135, 751
AsuC2I CCSGG 1 cut(s) 1054
AsuHPI GGTGA 8 cut(s) 125, 397, 506, 563, 644, 700, 997, 1244
AvaI CYCGRG 1 cut(s) 530
AvaII GGWCC 2 cut(s) 135, 751
BanI GGYRCC 1 cut(s) 1160
BauI CACGAG 1 cut(s) 1317
BbsI GAAGAC 2 cut(s) 1290, 1476
Bbv12I GWGCWC 1 cut(s) 1348
BbvI GCAGC 4 cut(s) 96, 581, 751, 807
BceAI ACGGC 1 cut(s) 1055
BcgI CGANNNNNNTGC 2 cut(s) 1356, 1390
BciT130I CCWGG 1 cut(s) 702
BciVI GTATCC 1 cut(s) 104
BclI TGATCA 1 cut(s) 205
BcnI CCSGG 1 cut(s) 1054
BcoDI GTCTC 3 cut(s) 602, 1107, 1200
BcuI ACTAGT 1 cut(s) 1184
BfaI CTAG 4 cut(s) 1185, 1280, 1341, 1499
BfmI CTRYAG 1 cut(s) 567
BfoI RGCGCY 1 cut(s) 1164
BfuI GTATCC 1 cut(s) 104
BisI GCNGC 4 cut(s) 85, 570, 740, 796
BlsI GCNGC 4 cut(s) 86, 571, 741, 797
Bme1390I CCNGG 2 cut(s) 702, 1054
Bme18I GGWCC 2 cut(s) 135, 751
BmeT110I CYCGRG 1 cut(s) 530
BmgT120I GGNCC 2 cut(s) 135, 751
BmiI GGNNCC 2 cut(s) 137, 1162
BmrFI CCNGG 2 cut(s) 702, 1054
BmsI GCATC 7 cut(s) 16, 244, 424, 961, 1024, 1370, 1474
BpiI GAAGAC 2 cut(s) 1290, 1476
BpmI CTGGAG 1 cut(s) 709
BpuMI CCSGG 1 cut(s) 1054
Bsa29I ATCGAT 1 cut(s) 151
BsaBI GATNNNNATC 1 cut(s) 114
BsaHI GRCGYC 2 cut(s) 1161, 1273
BsaJI CCNNGG 4 cut(s) 97, 531, 581, 747
BsaXI ACNNNNNCTCC 4 cut(s) 577, 607, 636, 666
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 145
Bse1I ACTGG 1 cut(s) 740
Bse8I GATNNNNATC 1 cut(s) 114
BseBI CCWGG 1 cut(s) 702
BseCI ATCGAT 1 cut(s) 151
BseDI CCNNGG 4 cut(s) 97, 531, 581, 747
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 2 cut(s) 18, 145
BseMII CTCAG 2 cut(s) 88, 113
BseNI ACTGG 1 cut(s) 740
BsePI GCGCGC 1 cut(s) 974
BseRI GAGGAG 1 cut(s) 548
BseXI GCAGC 4 cut(s) 96, 581, 751, 807
BsgI GTGCAG 1 cut(s) 1259
Bsh1236I CGCG 1 cut(s) 976
BshFI GGCC 2 cut(s) 102, 1057
BshNI GGYRCC 1 cut(s) 1160
BshVI ATCGAT 1 cut(s) 151
BsiHKAI GWGCWC 1 cut(s) 1348
BsiHKCI CYCGRG 1 cut(s) 530
BsiSI CCGG 1 cut(s) 1054
BslFI GGGAC 1 cut(s) 1046
BslI CCNNNNNNNGG 2 cut(s) 18, 145
BsmAI GTCTC 3 cut(s) 602, 1107, 1200
BsmFI GGGAC 1 cut(s) 1046
BsnI GGCC 2 cut(s) 102, 1057
BsoBI CYCGRG 1 cut(s) 530
Bsp1286I GDGCHC 1 cut(s) 1348
Bsp1407I TGTACA 1 cut(s) 321
Bsp143I GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
Bsp19I CCATGG 1 cut(s) 747
BspACI CCGC 2 cut(s) 12, 787
BspANI GGCC 2 cut(s) 102, 1057
BspCNI CTCAG 2 cut(s) 87, 114
BspDI ATCGAT 1 cut(s) 151
BspFNI CGCG 1 cut(s) 976
BspHI TCATGA 2 cut(s) 472, 1047
BspLI GGNNCC 2 cut(s) 137, 1162
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 2 cut(s) 156, 1088
BspQI GCTCTTC 1 cut(s) 1353
BspT107I GGYRCC 1 cut(s) 1160
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 1 cut(s) 740
BssECI CCNNGG 4 cut(s) 97, 531, 581, 747
BssHII GCGCGC 1 cut(s) 974
BssMI GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
BssNI GRCGYC 2 cut(s) 1161, 1273
BssSI CACGAG 1 cut(s) 1317
BssT1I CCWWGG 2 cut(s) 581, 747
Bst2BI CACGAG 1 cut(s) 1317
Bst2UI CCWGG 1 cut(s) 702
Bst4CI ACNGT 6 cut(s) 130, 441, 494, 652, 755, 1584
Bst6I CTCTTC 4 cut(s) 504, 618, 1353, 1385
BstACI GRCGYC 2 cut(s) 1161, 1273
BstAUI TGTACA 1 cut(s) 321
BstC8I GCNNGC 6 cut(s) 6, 221, 225, 657, 684, 976
BstDEI CTNAG 3 cut(s) 74, 122, 311
BstDSI CCRYGG 1 cut(s) 747
BstFNI CGCG 1 cut(s) 976
BstH2I RGCGCY 1 cut(s) 1164
BstHHI GCGC 3 cut(s) 976, 978, 1163
BstKTI GATC 6 cut(s) 118, 151, 166, 208, 1096, 1316
BstMAI GTCTC 3 cut(s) 602, 1107, 1200
BstMBI GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
BstMWI GCNNNNNNNGC 1 cut(s) 1448
BstNI CCWGG 1 cut(s) 702
BstNSI RCATGY 2 cut(s) 686, 1491
BstSCI CCNGG 2 cut(s) 700, 1052
BstSFI CTRYAG 1 cut(s) 567
BstUI CGCG 1 cut(s) 976
BstV1I GCAGC 4 cut(s) 96, 581, 751, 807
BstV2I GAAGAC 2 cut(s) 1290, 1476
Bsu15I ATCGAT 1 cut(s) 151
BsuI GTATCC 1 cut(s) 104
BsuRI GGCC 2 cut(s) 102, 1057
BsuTUI ATCGAT 1 cut(s) 151
BtgI CCRYGG 1 cut(s) 747
BtsIMutI CAGTG 2 cut(s) 648, 1215
Cac8I GCNNGC 6 cut(s) 6, 221, 225, 657, 684, 976
CciI TCATGA 2 cut(s) 472, 1047
CfoI GCGC 3 cut(s) 976, 978, 1163
Cfr13I GGNCC 2 cut(s) 135, 751
ClaI ATCGAT 1 cut(s) 151
CseI GACGC 1 cut(s) 1262
Csp6I GTAC 5 cut(s) 43, 322, 425, 561, 1445
CspCI CAANNNNNGTGG 2 cut(s) 1153, 1188
CviQI GTAC 5 cut(s) 43, 322, 425, 561, 1445
DdeI CTNAG 3 cut(s) 74, 122, 311
DinI GGCGCC 1 cut(s) 1162
DpnI GATC 6 cut(s) 117, 150, 165, 207, 1095, 1315
DpnII GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
Eam1104I CTCTTC 4 cut(s) 504, 618, 1353, 1385
EarI CTCTTC 4 cut(s) 504, 618, 1353, 1385
Eco130I CCWWGG 2 cut(s) 581, 747
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 2 cut(s) 135, 751
Eco57I CTGAAG 4 cut(s) 23, 343, 599, 1239
Eco88I CYCGRG 1 cut(s) 530
EcoRII CCWGG 1 cut(s) 700
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 2 cut(s) 581, 747
EcoT22I ATGCAT 1 cut(s) 1489
EgeI GGCGCC 1 cut(s) 1162
EheI GGCGCC 1 cut(s) 1162
ErhI CCWWGG 2 cut(s) 581, 747
FalI AAGNNNNNCTT 2 cut(s) 851, 883
FaqI GGGAC 1 cut(s) 1046
FauNDI CATATG 2 cut(s) 237, 274
FbaI TGATCA 1 cut(s) 205
FblI GTMKAC 1 cut(s) 1276
Fnu4HI GCNGC 4 cut(s) 85, 570, 740, 796
Fsp4HI GCNGC 4 cut(s) 85, 570, 740, 796
FspBI CTAG 4 cut(s) 1185, 1280, 1341, 1499
GlaI GCGC 3 cut(s) 975, 977, 1162
GluI GCNGC 4 cut(s) 85, 570, 740, 796
GsuI CTGGAG 1 cut(s) 709
HaeII RGCGCY 1 cut(s) 1164
HaeIII GGCC 2 cut(s) 102, 1057
HapII CCGG 1 cut(s) 1054
HgaI GACGC 1 cut(s) 1262
HhaI GCGC 3 cut(s) 976, 978, 1163
Hin1I GRCGYC 2 cut(s) 1161, 1273
Hin6I GCGC 3 cut(s) 974, 976, 1161
HinP1I GCGC 3 cut(s) 974, 976, 1161
HincII GTYRAC 3 cut(s) 1105, 1248, 1277
HindII GTYRAC 3 cut(s) 1105, 1248, 1277
HinfI GANTC 8 cut(s) 337, 536, 610, 645, 705, 937, 1115, 1244
HpaII CCGG 1 cut(s) 1054
HphI GGTGA 8 cut(s) 125, 397, 506, 563, 644, 700, 997, 1244
Hpy166II GTNNAC 5 cut(s) 427, 821, 1105, 1248, 1277
Hpy188I TCNGA 5 cut(s) 98, 291, 449, 912, 1384
Hpy188III TCNNGA 9 cut(s) 133, 473, 530, 617, 726, 1048, 1130, 1317, 1352
Hpy8I GTNNAC 5 cut(s) 427, 821, 1105, 1248, 1277
Hpy99I CGWCG 1 cut(s) 1278
HpyAV CCTTC 3 cut(s) 47, 1151, 1507
HpyCH4III ACNGT 6 cut(s) 130, 441, 494, 652, 755, 1584
HpyF10VI GCNNNNNNNGC 1 cut(s) 1448
HpyF3I CTNAG 3 cut(s) 74, 122, 311
Hsp92I GRCGYC 2 cut(s) 1161, 1273
HspAI GCGC 3 cut(s) 974, 976, 1161
KasI GGCGCC 1 cut(s) 1160
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
LguI GCTCTTC 1 cut(s) 1353
LmnI GCTCC 5 cut(s) 74, 679, 728, 1138, 1175
Lsp1109I GCAGC 4 cut(s) 96, 581, 751, 807
LweI GCATC 7 cut(s) 16, 244, 424, 961, 1024, 1370, 1474
MaeI CTAG 4 cut(s) 1185, 1280, 1341, 1499
MaeIII GTNAC 4 cut(s) 385, 494, 646, 985
MalI GATC 6 cut(s) 117, 150, 165, 207, 1095, 1315
MboI GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
MhlI GDGCHC 1 cut(s) 1348
MluCI AATT 3 cut(s) 197, 947, 1544
Mly113I GGCGCC 1 cut(s) 1161
MlyI GAGTC 5 cut(s) 545, 604, 654, 1109, 1253
MnlI CCTC 9 cut(s) 19, 83, 92, 345, 526, 856, 1291, 1495, 1560
Mph1103I ATGCAT 1 cut(s) 1489
MseI TTAA 5 cut(s) 870, 891, 1020, 1181, 1542
MslI CAYNNNNRTG 4 cut(s) 50, 432, 549, 1032
MspI CCGG 1 cut(s) 1054
MspR9I CCNGG 2 cut(s) 702, 1054
MvaI CCWGG 1 cut(s) 702
MvnI CGCG 1 cut(s) 976
MwoI GCNNNNNNNGC 1 cut(s) 1448
NarI GGCGCC 1 cut(s) 1161
NciI CCSGG 1 cut(s) 1054
NcoI CCATGG 1 cut(s) 747
NdeI CATATG 2 cut(s) 237, 274
NdeII GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
NlaIV GGNNCC 2 cut(s) 137, 1162
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 4 cut(s) 385, 494, 646, 985
NsiI ATGCAT 1 cut(s) 1489
NspI RCATGY 2 cut(s) 686, 1491
PaeI GCATGC 1 cut(s) 686
PagI TCATGA 2 cut(s) 472, 1047
PauI GCGCGC 1 cut(s) 974
PciSI GCTCTTC 1 cut(s) 1353
PfeI GAWTC 3 cut(s) 337, 705, 937
PfoI TCCNGGA 1 cut(s) 700
PkrI GCNGC 4 cut(s) 86, 571, 741, 797
PleI GAGTC 5 cut(s) 544, 604, 653, 1109, 1252
PluTI GGCGCC 1 cut(s) 1164
PpsI GAGTC 5 cut(s) 544, 604, 653, 1109, 1252
PsiI TTATAA 2 cut(s) 932, 1071
Psp6I CCWGG 1 cut(s) 700
PspGI CCWGG 1 cut(s) 700
PspN4I GGNNCC 2 cut(s) 137, 1162
PspPI GGNCC 2 cut(s) 135, 751
PstI CTGCAG 1 cut(s) 571
PteI GCGCGC 1 cut(s) 974
RsaI GTAC 5 cut(s) 44, 323, 426, 562, 1446
RsaNI GTAC 5 cut(s) 43, 322, 425, 561, 1445
RseI CAYNNNNRTG 4 cut(s) 50, 432, 549, 1032
SalI GTCGAC 1 cut(s) 1275
SapI GCTCTTC 1 cut(s) 1353
SaqAI TTAA 5 cut(s) 870, 891, 1020, 1181, 1542
SatI GCNGC 4 cut(s) 85, 570, 740, 796
Sau3AI GATC 6 cut(s) 115, 148, 163, 205, 1093, 1313
Sau96I GGNCC 2 cut(s) 135, 751
SchI GAGTC 5 cut(s) 545, 604, 654, 1109, 1253
ScrFI CCNGG 2 cut(s) 702, 1054
SduI GDGCHC 1 cut(s) 1348
SetI ASST 5 cut(s) 426, 553, 786, 1129, 1476
SfaNI GCATC 7 cut(s) 16, 244, 424, 961, 1024, 1370, 1474
SfcI CTRYAG 1 cut(s) 567
SfoI GGCGCC 1 cut(s) 1162
SinI GGWCC 2 cut(s) 135, 751
SmiMI CAYNNNNRTG 4 cut(s) 50, 432, 549, 1032
SpeI ACTAGT 1 cut(s) 1184
SphI GCATGC 1 cut(s) 686
Sse9I AATT 3 cut(s) 197, 947, 1544
SsiI CCGC 2 cut(s) 12, 787
SspDI GGCGCC 1 cut(s) 1160
SspI AATATT 1 cut(s) 526
SspMI CTAG 4 cut(s) 1185, 1280, 1341, 1499
StyD4I CCNGG 2 cut(s) 700, 1052
StyI CCWWGG 2 cut(s) 581, 747
TaaI ACNGT 6 cut(s) 130, 441, 494, 652, 755, 1584
TaqI TCGA 6 cut(s) 151, 485, 507, 898, 1276, 1576
TasI AATT 3 cut(s) 197, 947, 1544
TatI WGTACW 3 cut(s) 42, 321, 1444
TfiI GAWTC 3 cut(s) 337, 705, 937
Tru1I TTAA 5 cut(s) 870, 891, 1020, 1181, 1542
Tru9I TTAA 5 cut(s) 870, 891, 1020, 1181, 1542
TscAI CASTG 2 cut(s) 655, 1222
TseFI GTSAC 4 cut(s) 385, 494, 646, 985
TseI GCWGC 4 cut(s) 84, 569, 739, 795
Tsp45I GTSAC 4 cut(s) 385, 494, 646, 985
TspDTI ATGAA 9 cut(s) 148, 291, 384, 426, 751, 1036, 1239, 1516, 1521
TspGWI ACGGA 1 cut(s) 806
TspRI CASTG 2 cut(s) 655, 1222
VpaK11BI GGWCC 2 cut(s) 135, 751
XapI RAATTY 1 cut(s) 197
XceI RCATGY 2 cut(s) 686, 1491
XmiI GTMKAC 1 cut(s) 1276
XspI CTAG 4 cut(s) 1185, 1280, 1341, 1499
Zsp2I ATGCAT 1 cut(s) 1489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.