pycom01g08370

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
9315162 .. 9316207
1046 bp
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UTR
Exon/CDS
Intron
pycom01g08370.2

Sequence Viewer

Length: 243 bp
ATGTGGACTGACCAAATGCAGGAACCATTAGAATCAAAGAAAAAGGGGGATTCTGCTTTTAAGCACAAGGACTTCAGAACCGCAATTGAGCAATTCACAGACTCTCGGCTGCTGTTCTTGACGGCTGGGCAGAGTTCTTCCCACTTGAAACTTCTGCTTATCGCTCATGTCGAAGAACCGATGAGTATGCCTTGTTCACCGTGGGTAATGGCTCCAGAAGGAGAATGTTGCTACCGACAGTAG

Protein Analysis

81

Amino Acids

9.2

Weight (kDa)

5.85

Isoelectric Point (pI)

65.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022384)

Species Orthologous Gene IDs
malus_domestica MD01G1057200.v1.1
pyrus_communis pycom01g08370 pycom01g08510 pycom01g08620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 81
AcuI CTGAAG 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 19
AgsI TTSAA 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 109
AsuHPI GGTGA 1 cut(s) 189
BbvI GCAGC 1 cut(s) 96
BceAI ACGGC 1 cut(s) 138
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BisI GCNGC 1 cut(s) 110
BlsI GCNGC 1 cut(s) 111
BmiI GGNNCC 2 cut(s) 24, 213
BpmI CTGGAG 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 200
Bsc4I CCNNNNNNNGG 1 cut(s) 19
BseDI CCNNGG 1 cut(s) 200
BseLI CCNNNNNNNGG 1 cut(s) 19
BseXI GCAGC 1 cut(s) 96
BseYI CCCAGC 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 19
BspACI CCGC 1 cut(s) 81
BspLI GGNNCC 2 cut(s) 24, 213
BssECI CCNNGG 1 cut(s) 200
Bst4CI ACNGT 2 cut(s) 201, 240
BstDSI CCRYGG 1 cut(s) 200
BstV1I GCAGC 1 cut(s) 96
BtgI CCRYGG 1 cut(s) 200
CviAII CATG 1 cut(s) 167
CviJI RGCY 3 cut(s) 109, 125, 212
CviKI_1 RGCY 3 cut(s) 109, 125, 212
Eco57I CTGAAG 1 cut(s) 58
FaeI CATG 1 cut(s) 170
FaiI YATR 2 cut(s) 168, 188
FatI CATG 1 cut(s) 166
Fnu4HI GCNGC 1 cut(s) 110
Fsp4HI GCNGC 1 cut(s) 110
GluI GCNGC 1 cut(s) 110
GsaI CCCAGC 1 cut(s) 129
GsuI CTGGAG 1 cut(s) 198
Hin1II CATG 1 cut(s) 170
HinfI GANTC 3 cut(s) 32, 50, 101
HphI GGTGA 1 cut(s) 189
Hpy166II GTNNAC 2 cut(s) 6, 197
Hpy188I TCNGA 1 cut(s) 77
Hpy188III TCNNGA 2 cut(s) 118, 215
Hpy8I GTNNAC 2 cut(s) 6, 197
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 2 cut(s) 201, 240
HpyCH4V TGCA 1 cut(s) 19
Hsp92II CATG 1 cut(s) 170
LmnI GCTCC 1 cut(s) 217
LpnPI CCDG 3 cut(s) 5, 111, 228
Lsp1109I GCAGC 1 cut(s) 96
MboII GAAGA 2 cut(s) 129, 185
MfeI CAATTG 1 cut(s) 84
MluCI AATT 2 cut(s) 84, 92
MlyI GAGTC 1 cut(s) 95
MseI TTAA 1 cut(s) 60
MunI CAATTG 1 cut(s) 84
NlaIII CATG 1 cut(s) 170
NlaIV GGNNCC 2 cut(s) 24, 213
NmeAIII GCCGAG 1 cut(s) 85
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PfeI GAWTC 2 cut(s) 32, 50
PkrI GCNGC 1 cut(s) 111
PleI GAGTC 1 cut(s) 95
PpsI GAGTC 1 cut(s) 95
PspFI CCCAGC 1 cut(s) 125
PspN4I GGNNCC 2 cut(s) 24, 213
PsrI GAACNNNNNNTAC 2 cut(s) 178, 210
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 1 cut(s) 110
SchI GAGTC 1 cut(s) 95
Sse9I AATT 2 cut(s) 84, 92
SsiI CCGC 1 cut(s) 81
TaaI ACNGT 2 cut(s) 201, 240
TaqI TCGA 1 cut(s) 171
TasI AATT 2 cut(s) 84, 92
TfiI GAWTC 2 cut(s) 32, 50
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TseI GCWGC 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.