pycom02g15630

Copper-transporting ATPase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
12523454 .. 12524734
1281 bp
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UTR
Exon/CDS
Intron
pycom02g15630.1

Sequence Viewer

Length: 255 bp
ATGGTTGCTTGCCCTTGTGCCTTGGGACTAGCAACCCCCATGGTAATAATGGTTGCAGAAGGGAAGGGTGTTTCGCAATGTGTTCTTATCAAGGGTGGAAATGCACTCGAAAAGGCTCATAAGGCAAATAGTGAACACCCAATAGCGAAATCGATGGTGGAGCATGCCAAAAGGCTACTAAAGACATTTGGATCAACTGAACATGTGATGAAGGCTAATGGTTTTGGTTGGGAACAAGAGACTCATGCGGCATAA

Protein Analysis

85

Amino Acids

8.9

Weight (kDa)

8.54

Isoelectric Point (pI)

24.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024333)

Species Orthologous Gene IDs
malus_domestica MD03G1138300.v1.1
pyrus_communis pycom02g15630 pycom03g13580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 248
AclWI GGATC 1 cut(s) 199
AflIII ACRYGT 1 cut(s) 202
Alw26I GTCTC 1 cut(s) 233
AlwI GGATC 1 cut(s) 199
BccI CCATC 1 cut(s) 148
BcoDI GTCTC 1 cut(s) 233
BfaI CTAG 1 cut(s) 29
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
Bsa29I ATCGAT 1 cut(s) 152
BsaJI CCNNGG 2 cut(s) 21, 39
Bse3DI GCAATG 1 cut(s) 83
BseCI ATCGAT 1 cut(s) 152
BseDI CCNNGG 2 cut(s) 21, 39
BseMI GCAATG 1 cut(s) 83
BshVI ATCGAT 1 cut(s) 152
BslFI GGGAC 1 cut(s) 39
BsmAI GTCTC 1 cut(s) 233
BsmFI GGGAC 1 cut(s) 39
Bsp143I GATC 1 cut(s) 191
Bsp19I CCATGG 1 cut(s) 39
BspACI CCGC 1 cut(s) 248
BspDI ATCGAT 1 cut(s) 152
BspPI GGATC 1 cut(s) 199
BsrDI GCAATG 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 21, 39
BssMI GATC 1 cut(s) 191
BssT1I CCWWGG 2 cut(s) 21, 39
BstC8I GCNNGC 2 cut(s) 10, 165
BstDSI CCRYGG 1 cut(s) 39
BstKTI GATC 1 cut(s) 194
BstMAI GTCTC 1 cut(s) 233
BstMBI GATC 1 cut(s) 191
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstNSI RCATGY 2 cut(s) 167, 206
Bsu15I ATCGAT 1 cut(s) 152
BsuTUI ATCGAT 1 cut(s) 152
BtgI CCRYGG 1 cut(s) 39
Cac8I GCNNGC 2 cut(s) 10, 165
ClaI ATCGAT 1 cut(s) 152
CviAII CATG 4 cut(s) 40, 164, 203, 245
CviJI RGCY 3 cut(s) 116, 175, 215
CviKI_1 RGCY 3 cut(s) 116, 175, 215
DpnI GATC 1 cut(s) 193
DpnII GATC 1 cut(s) 191
Eco130I CCWWGG 2 cut(s) 21, 39
EcoT14I CCWWGG 2 cut(s) 21, 39
ErhI CCWWGG 2 cut(s) 21, 39
FaeI CATG 4 cut(s) 43, 167, 206, 248
FaiI YATR 6 cut(s) 41, 120, 165, 204, 246, 253
FaqI GGGAC 1 cut(s) 39
FatI CATG 4 cut(s) 39, 163, 202, 244
Fnu4HI GCNGC 1 cut(s) 249
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 1 cut(s) 29
GluI GCNGC 1 cut(s) 249
Hin1II CATG 4 cut(s) 43, 167, 206, 248
HinfI GANTC 1 cut(s) 241
Hpy166II GTNNAC 1 cut(s) 134
Hpy8I GTNNAC 1 cut(s) 134
HpyAV CCTTC 3 cut(s) 53, 58, 205
HpyCH4V TGCA 2 cut(s) 56, 104
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
Hsp92II CATG 4 cut(s) 43, 167, 206, 248
Kzo9I GATC 1 cut(s) 191
LmnI GCTCC 1 cut(s) 160
MaeI CTAG 1 cut(s) 29
MalI GATC 1 cut(s) 193
MboI GATC 1 cut(s) 191
MlyI GAGTC 1 cut(s) 235
MwoI GCNNNNNNNGC 1 cut(s) 122
NcoI CCATGG 1 cut(s) 39
NdeII GATC 1 cut(s) 191
NlaIII CATG 4 cut(s) 43, 167, 206, 248
NspI RCATGY 2 cut(s) 167, 206
PaeI GCATGC 1 cut(s) 167
PciI ACATGT 1 cut(s) 202
PkrI GCNGC 1 cut(s) 250
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
PscI ACATGT 1 cut(s) 202
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 1 cut(s) 191
SchI GAGTC 1 cut(s) 235
SphI GCATGC 1 cut(s) 167
SsiI CCGC 1 cut(s) 248
SspMI CTAG 1 cut(s) 29
StyI CCWWGG 2 cut(s) 21, 39
TaqI TCGA 2 cut(s) 108, 152
TauI GCSGC 1 cut(s) 251
TspDTI ATGAA 1 cut(s) 224
XceI RCATGY 2 cut(s) 167, 206
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
XspI CTAG 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.