pycom02g25270

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
23286975 .. 23287426
452 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g25270.2

Sequence Viewer

Length: 396 bp
ATGCCATTGACCAGAGGCGAAGTGATAGATGTATTGGTAATCCCAGATCTCAGAGACAATGTGATTTTGGTAAAGGAAATGTACCTTTGTGCTGTAGGTACAATAATGGACACCTTTGAGAATGTAGGCGAGAAAGCATTGGACGCTTTACAAGTGGATAGATGGGACATAGAACTACAAATTATGTCCAAAGCCAACAGAATCCCTAGCAGTCTTCTTTGCCGTGGTGTACATGAAAGAAGTATTTACACTAATAGAGGTTGTGGGAGACAACAACAAGCCCAGGGATGTGTTAACCACACATCACTGCAAGATACTCAGAATTATTTGGATTTGATTAGGGGTACGATAATTATTCTTAATGACTTAGCTAGAGTCTATTTGTTAATAATGTAG

Protein Analysis

132

Amino Acids

14.85

Weight (kDa)

5.28

Isoelectric Point (pI)

34.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0020433)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 4 cut(s) 83, 100, 231, 346
AjnI CCWGG 1 cut(s) 282
AluBI AGCT 1 cut(s) 371
AluI AGCT 1 cut(s) 371
Alw26I GTCTC 2 cut(s) 48, 262
BbsI GAAGAC 1 cut(s) 206
BccI CCATC 1 cut(s) 156
BceAI ACGGC 1 cut(s) 207
BciT130I CCWGG 1 cut(s) 284
BcoDI GTCTC 2 cut(s) 48, 262
BfaI CTAG 2 cut(s) 207, 372
BfmI CTRYAG 1 cut(s) 93
BglII AGATCT 1 cut(s) 46
Bme1390I CCNGG 1 cut(s) 284
BmrFI CCNGG 1 cut(s) 284
BpiI GAAGAC 1 cut(s) 206
BsaJI CCNNGG 3 cut(s) 223, 282, 283
BseBI CCWGG 1 cut(s) 284
BseDI CCNNGG 3 cut(s) 223, 282, 283
BseGI GGATG 1 cut(s) 293
BseMII CTCAG 2 cut(s) 64, 332
BslFI GGGAC 1 cut(s) 179
BsmAI GTCTC 2 cut(s) 48, 262
BsmFI GGGAC 1 cut(s) 179
Bsp1407I TGTACA 1 cut(s) 229
Bsp143I GATC 1 cut(s) 46
BspCNI CTCAG 2 cut(s) 63, 331
BsrGI TGTACA 1 cut(s) 229
BssECI CCNNGG 3 cut(s) 223, 282, 283
BssMI GATC 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 284
BstAUI TGTACA 1 cut(s) 229
BstDEI CTNAG 3 cut(s) 50, 318, 367
BstDSI CCRYGG 1 cut(s) 223
BstF5I GGATG 1 cut(s) 293
BstKTI GATC 1 cut(s) 49
BstMAI GTCTC 2 cut(s) 48, 262
BstMBI GATC 1 cut(s) 46
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstNI CCWGG 1 cut(s) 284
BstSCI CCNGG 1 cut(s) 282
BstSFI CTRYAG 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
BtgI CCRYGG 1 cut(s) 223
BtsCI GGATG 1 cut(s) 293
BtsI GCAGTG 1 cut(s) 305
BtsIMutI CAGTG 1 cut(s) 305
CseI GACGC 1 cut(s) 152
Csp6I GTAC 4 cut(s) 82, 99, 230, 345
CviAII CATG 1 cut(s) 233
CviJI RGCY 3 cut(s) 194, 281, 371
CviKI_1 RGCY 3 cut(s) 194, 281, 371
CviQI GTAC 4 cut(s) 82, 99, 230, 345
DdeI CTNAG 3 cut(s) 50, 318, 367
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
EcoRII CCWGG 1 cut(s) 282
FaeI CATG 1 cut(s) 236
FaiI YATR 3 cut(s) 170, 185, 234
FaqI GGGAC 1 cut(s) 179
FatI CATG 1 cut(s) 232
FokI GGATG 1 cut(s) 300
FspBI CTAG 2 cut(s) 207, 372
HgaI GACGC 1 cut(s) 152
Hin1II CATG 1 cut(s) 236
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 2 cut(s) 201, 375
HpaI GTTAAC 1 cut(s) 295
Hpy166II GTNNAC 2 cut(s) 230, 295
Hpy188I TCNGA 2 cut(s) 53, 321
Hpy8I GTNNAC 2 cut(s) 230, 295
HpyCH4V TGCA 1 cut(s) 310
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpyF3I CTNAG 3 cut(s) 50, 318, 367
Hsp92II CATG 1 cut(s) 236
KspAI GTTAAC 1 cut(s) 295
Kzo9I GATC 1 cut(s) 46
LpnPI CCDG 4 cut(s) 25, 57, 269, 296
MaeI CTAG 2 cut(s) 207, 372
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MboII GAAGA 1 cut(s) 206
MflI RGATCY 1 cut(s) 46
MluCI AATT 3 cut(s) 180, 322, 351
MlyI GAGTC 1 cut(s) 384
MnlI CCTC 2 cut(s) 8, 251
MseI TTAA 3 cut(s) 294, 360, 386
MspR9I CCNGG 1 cut(s) 284
MvaI CCWGG 1 cut(s) 284
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeII GATC 1 cut(s) 46
NlaIII CATG 1 cut(s) 236
PasI CCCWGGG 1 cut(s) 283
PfeI GAWTC 1 cut(s) 201
PleI GAGTC 1 cut(s) 383
PpsI GAGTC 1 cut(s) 383
Psp6I CCWGG 1 cut(s) 282
PspGI CCWGG 1 cut(s) 282
PsuI RGATCY 1 cut(s) 46
RsaI GTAC 4 cut(s) 83, 100, 231, 346
RsaNI GTAC 4 cut(s) 82, 99, 230, 345
SaqAI TTAA 3 cut(s) 294, 360, 386
Sau3AI GATC 1 cut(s) 46
SchI GAGTC 1 cut(s) 384
ScrFI CCNGG 1 cut(s) 284
SetI ASST 5 cut(s) 87, 100, 116, 262, 373
SfcI CTRYAG 1 cut(s) 93
Sse9I AATT 3 cut(s) 180, 322, 351
SspMI CTAG 2 cut(s) 207, 372
StyD4I CCNGG 1 cut(s) 282
TasI AATT 3 cut(s) 180, 322, 351
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 1 cut(s) 201
Tru1I TTAA 3 cut(s) 294, 360, 386
Tru9I TTAA 3 cut(s) 294, 360, 386
TscAI CASTG 1 cut(s) 312
TspDTI ATGAA 1 cut(s) 249
TspRI CASTG 1 cut(s) 312
XspI CTAG 2 cut(s) 207, 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.