pycom09g13890

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
13068269 .. 13068499
231 bp
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UTR
Exon/CDS
Intron
pycom09g13890.1

Sequence Viewer

Length: 231 bp
ATGCCATTGACCAGAGGCGAAGTGATAGATGTATTGGTAATCCCAGATCTCAGCGACAAGGTGATTTTGGTAAAGGAAATGTACCTTTGTGCTGTAGGTACAATAATGGACACCTTTGAGAATGTAGGCAAGAAAGCAGTGGACGCTTTACAAGTGGATAGATGGGACATAGAACTGCAAATTATGTCCAAAGCCAACAGAATCCCTAGCAGTCTTCTTTGCCACAACTAG

Protein Analysis

77

Amino Acids

8.51

Weight (kDa)

4.87

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020433)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 83, 100
AsuHPI GGTGA 1 cut(s) 73
BbsI GAAGAC 1 cut(s) 206
BccI CCATC 1 cut(s) 156
BfaI CTAG 2 cut(s) 207, 229
BfmI CTRYAG 1 cut(s) 93
BglII AGATCT 1 cut(s) 46
BpiI GAAGAC 1 cut(s) 206
BseMII CTCAG 1 cut(s) 64
BslFI GGGAC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 179
Bsp143I GATC 1 cut(s) 46
BspCNI CTCAG 1 cut(s) 63
BssMI GATC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 50
BstKTI GATC 1 cut(s) 49
BstMBI GATC 1 cut(s) 46
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstSFI CTRYAG 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 1 cut(s) 144
CseI GACGC 1 cut(s) 152
Csp6I GTAC 2 cut(s) 82, 99
CviJI RGCY 1 cut(s) 194
CviKI_1 RGCY 1 cut(s) 194
CviQI GTAC 2 cut(s) 82, 99
DdeI CTNAG 1 cut(s) 50
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
FaiI YATR 2 cut(s) 170, 185
FaqI GGGAC 1 cut(s) 179
FspBI CTAG 2 cut(s) 207, 229
HgaI GACGC 1 cut(s) 152
HinfI GANTC 1 cut(s) 201
HphI GGTGA 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 142
Hpy8I GTNNAC 1 cut(s) 142
HpyCH4V TGCA 1 cut(s) 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpyF3I CTNAG 1 cut(s) 50
Kzo9I GATC 1 cut(s) 46
LpnPI CCDG 2 cut(s) 25, 57
MaeI CTAG 2 cut(s) 207, 229
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MboII GAAGA 1 cut(s) 206
MflI RGATCY 1 cut(s) 46
MluCI AATT 1 cut(s) 180
MnlI CCTC 1 cut(s) 8
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeII GATC 1 cut(s) 46
PfeI GAWTC 1 cut(s) 201
PsuI RGATCY 1 cut(s) 46
RsaI GTAC 2 cut(s) 83, 100
RsaNI GTAC 2 cut(s) 82, 99
Sau3AI GATC 1 cut(s) 46
SetI ASST 4 cut(s) 63, 87, 100, 116
SfcI CTRYAG 1 cut(s) 93
SgeI CNNG 6 cut(s) 24, 56, 70, 142, 164, 219
Sse9I AATT 1 cut(s) 180
SspMI CTAG 2 cut(s) 207, 229
TasI AATT 1 cut(s) 180
TfiI GAWTC 1 cut(s) 201
TscAI CASTG 1 cut(s) 144
TspRI CASTG 1 cut(s) 144
XspI CTAG 2 cut(s) 207, 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.