pycom03g10710

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
9971889 .. 9973274
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1386 bp
ATGGCTTCCTATATCTTCCTGTTTCTGCTCTCCCTACTTCTCCTTCTACCTTCCATTTCTTCCAATATTACCACCATTCCACTCTCACATTTCCACAGAAACCCGCATCCACATCCACATCTTCATCCATGCCACCACCTCAACAACTTAGCAACCTCATCTCTAAAAAGAGCCCACCACCTCAAAAACCCCCAAACCACAACCACCCACCGTACCACCACCCCGGTCTTCTCCCAAAGCTACGGCGGCTACTCCATACCCCTCAGCTTTGGTACCCCTCCCCAAACCCTTTCTTTCATCATGGACACCGGCAGCGACTTCACTTGGTTCCCTTGCACCAAAAACTACCAATGCGTCAACTGCCCCTCTTATCTCAAACCTTTTATTCCCAAATTGTCCTCATCCTCCAAAATCCTCGGCTGCTCCGATTCTAAATGCGCTTTGTTTCACAACAAATCCCCCCGCTTTCACTGCCAAGCTTGCCGGCCAAATTCCAAAAACTGCACCCAGATGTGCCCTGCCTACACATTCGTCTACGGCTTAGGGGAAACAACTGGAGTCCCGCTCTCTGAGACCCTCAACCTACCCACCCGATCCGTACCCGATTTCCTCGTCGGCTGCTCCGTTAGCTCTACCCACCAACCCCCAGCGGGCATTGCCGGATTGGGCCGAGGCCCTGCTTCTTTTCCCGGTCAATTGGGGTTCAAAAAGTTCTCCTACTGCCTTCTGTCCCGGCTTTTCGATGACACTAACAAAAGCAGCCTCCTGGTTCTCGACGCTGGAGAAAAATGGGCCAAGAAAACTACCGGTGTTATCTACACGCCGTTTGTAAGCAACCCATTAGTCCCCGCGAGACCAGCTTTCTCTGTCTACTACTACGTGGGTCTCCGCCAAATCAAGGTGGGACGGCGGCGCGTGAAAATTCCGTATAGGTACTTAAGGCCGGACTCAAGAGGCTCTGGTGGGACGATCATTGATTCCGGGACCACGTTCACGATCATGGCGCCCGAGGTGTCACAGCGCGTGTCGGGAGAGTTTGCGAGACAGATGGCAGCCGTAGGTTACAAGAGAGCTGAGGAAGTGGAGGCTGTGAGCGGGTTAAAGCCGTGTTACAGTATTTCCGGAGCCAAAAGTGCGGCGTTTCCGGTGGTGACGTTTCACTTCAAAGGAGGGGCTGAGGTGGCGCTGCCGGTGGAGAATTATATGGCGATTGCGGGTGACGATCTGGTGTGCTTGACGATTATGAGTGATAAGGAGCTTGGTGGGCCGGAAGTTTCCTCCTCCGGGCCTTCCATAATTATAGGGAGCTTTCAGCTGCAGAATTTCTATGTGGAATATGATCTGCTGAATGAGAGGTTGGGATTCAGGCAACAGCGATGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

462

Amino Acids

50.58

Weight (kDa)

9.26

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 84 - 257 3.4e-29 Xylanase inhibitor N-terminal
Asp PF00026 289 - 456 2.8e-09 Eukaryotic aspartyl protease
TAXi_C PF14541 292 - 456 5e-35 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022454)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 272
AccB1I GGYRCC 2 cut(s) 272, 1003
AccBSI CCGCTC 2 cut(s) 565, 1095
AccI GTMKAC 2 cut(s) 534, 870
AccII CGCG 3 cut(s) 851, 915, 1023
AccIII TCCGGA 1 cut(s) 1121
AclWI GGATC 1 cut(s) 588
AcoI YGGCCR 1 cut(s) 485
AcsI RAATTY 3 cut(s) 490, 921, 1321
AcyI GRCGYC 1 cut(s) 1004
AfaI GTAC 4 cut(s) 214, 274, 600, 935
AfiI CCNNNNNNNGG 3 cut(s) 650, 898, 1284
AflII CTTAAG 1 cut(s) 937
AgeI ACCGGT 1 cut(s) 806
AgsI TTSAA 2 cut(s) 706, 1165
AjnI CCWGG 1 cut(s) 765
AjuI GAANNNNNNNTTGG 2 cut(s) 1340, 1372
AluBI AGCT 9 cut(s) 240, 267, 479, 630, 860, 1073, 1258, 1308, 1315
AluI AGCT 9 cut(s) 240, 267, 479, 630, 860, 1073, 1258, 1308, 1315
Alw26I GTCTC 4 cut(s) 566, 847, 890, 1036
AlwI GGATC 1 cut(s) 588
Ama87I CYCGRG 1 cut(s) 1007
Aor13HI TCCGGA 1 cut(s) 1121
AoxI GGCC 7 cut(s) 485, 667, 673, 792, 941, 1265, 1286
ApeKI GCWGC 7 cut(s) 312, 420, 618, 759, 1052, 1186, 1315
ApoI RAATTY 3 cut(s) 490, 921, 1321
AsiGI ACCGGT 1 cut(s) 806
Asp718I GGTACC 1 cut(s) 272
AspLEI GCGC 5 cut(s) 440, 915, 1006, 1023, 1186
AspS9I GGNCC 6 cut(s) 667, 674, 792, 984, 1265, 1286
AsuC2I CCSGG 5 cut(s) 224, 690, 733, 982, 1285
AsuHPI GGTGA 2 cut(s) 1162, 1229
AvaI CYCGRG 1 cut(s) 1007
AvaII GGWCC 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 518
BanI GGYRCC 2 cut(s) 272, 1003
BanII GRGCYC 1 cut(s) 175
BbsI GAAGAC 1 cut(s) 220
BbvCI CCTCAGC 3 cut(s) 263, 1074, 1176
BbvI GCAGC 7 cut(s) 324, 407, 605, 771, 1064, 1173, 1302
BccI CCATC 1 cut(s) 1042
BceAI ACGGC 6 cut(s) 259, 553, 808, 923, 1040, 1090
BciT130I CCWGG 1 cut(s) 767
BcnI CCSGG 5 cut(s) 224, 690, 733, 982, 1285
BcoDI GTCTC 4 cut(s) 566, 847, 890, 1036
BfmI CTRYAG 1 cut(s) 1316
BfoI RGCGCY 2 cut(s) 1007, 1187
BfrI CTTAAG 1 cut(s) 937
Bme1390I CCNGG 6 cut(s) 224, 690, 733, 767, 982, 1285
Bme18I GGWCC 1 cut(s) 984
BmeT110I CYCGRG 1 cut(s) 1007
BmgT120I GGNCC 6 cut(s) 667, 674, 792, 984, 1265, 1286
BmiI GGNNCC 5 cut(s) 274, 329, 985, 1005, 1126
BmrFI CCNGG 6 cut(s) 224, 690, 733, 767, 982, 1285
BmsI GCATC 2 cut(s) 115, 1367
BpiI GAAGAC 1 cut(s) 220
BplI GAGNNNNNCTC 2 cut(s) 549, 581
BpmI CTGGAG 2 cut(s) 576, 801
Bpu10I CCTNAGC 4 cut(s) 263, 541, 1074, 1176
BpuEI CTTGAG 1 cut(s) 934
BpuMI CCSGG 5 cut(s) 224, 690, 733, 982, 1285
BsaAI YACGTR 1 cut(s) 880
BsaHI GRCGYC 1 cut(s) 1004
BsaI GGTCTC 3 cut(s) 566, 847, 890
BsaJI CCNNGG 4 cut(s) 222, 415, 670, 1008
BsaWI WCCGGW 3 cut(s) 806, 1121, 1144
Bsc4I CCNNNNNNNGG 3 cut(s) 650, 898, 1284
Bse118I RCCGGY 4 cut(s) 308, 483, 806, 1189
Bse1I ACTGG 1 cut(s) 559
Bse3DI GCAATG 1 cut(s) 654
BseAI TCCGGA 1 cut(s) 1121
BseBI CCWGG 1 cut(s) 767
BseDI CCNNGG 4 cut(s) 222, 415, 670, 1008
BseGI GGATG 4 cut(s) 106, 112, 124, 401
BseLI CCNNNNNNNGG 3 cut(s) 650, 898, 1284
BseMI GCAATG 1 cut(s) 654
BseMII CTCAG 4 cut(s) 277, 561, 1065, 1167
BseNI ACTGG 1 cut(s) 559
BseRI GAGGAG 1 cut(s) 1270
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 7 cut(s) 324, 407, 605, 771, 1064, 1173, 1302
BseYI CCCAGC 1 cut(s) 646
BsgI GTGCAG 1 cut(s) 487
Bsh1236I CGCG 3 cut(s) 851, 915, 1023
BshFI GGCC 7 cut(s) 487, 669, 675, 794, 943, 1267, 1288
BshNI GGYRCC 2 cut(s) 272, 1003
BshTI ACCGGT 1 cut(s) 806
BsiHKCI CYCGRG 1 cut(s) 1007
BslFI GGGAC 6 cut(s) 545, 715, 830, 918, 979, 997
BslI CCNNNNNNNGG 3 cut(s) 650, 898, 1284
BsmAI GTCTC 4 cut(s) 566, 847, 890, 1036
BsmFI GGGAC 6 cut(s) 545, 715, 830, 918, 979, 997
BsnI GGCC 7 cut(s) 487, 669, 675, 794, 943, 1267, 1288
Bso31I GGTCTC 3 cut(s) 566, 847, 890
BsoBI CYCGRG 1 cut(s) 1007
Bsp1286I GDGCHC 2 cut(s) 175, 518
Bsp13I TCCGGA 1 cut(s) 1121
Bsp143I GATC 5 cut(s) 593, 969, 996, 1222, 1339
BspANI GGCC 7 cut(s) 487, 669, 675, 794, 943, 1267, 1288
BspCNI CTCAG 4 cut(s) 276, 562, 1066, 1168
BspEI TCCGGA 1 cut(s) 1121
BspFNI CGCG 3 cut(s) 851, 915, 1023
BspLI GGNNCC 5 cut(s) 274, 329, 985, 1005, 1126
BspMAI CTGCAG 1 cut(s) 1320
BspPI GGATC 1 cut(s) 588
BspT107I GGYRCC 2 cut(s) 272, 1003
BspTI CTTAAG 1 cut(s) 937
BspTNI GGTCTC 3 cut(s) 566, 847, 890
BsrBI CCGCTC 2 cut(s) 565, 1095
BsrDI GCAATG 1 cut(s) 654
BsrFI RCCGGY 4 cut(s) 308, 483, 806, 1189
BsrI ACTGG 1 cut(s) 559
BssAI RCCGGY 4 cut(s) 308, 483, 806, 1189
BssECI CCNNGG 4 cut(s) 222, 415, 670, 1008
BssMI GATC 5 cut(s) 593, 969, 996, 1222, 1339
BssNI GRCGYC 1 cut(s) 1004
Bst2UI CCWGG 1 cut(s) 767
Bst4CI ACNGT 2 cut(s) 212, 1115
BstACI GRCGYC 1 cut(s) 1004
BstAFI CTTAAG 1 cut(s) 937
BstBAI YACGTR 1 cut(s) 880
BstC8I GCNNGC 3 cut(s) 481, 485, 652
BstDEI CTNAG 6 cut(s) 148, 263, 541, 570, 1074, 1176
BstF5I GGATG 4 cut(s) 106, 112, 124, 401
BstFNI CGCG 3 cut(s) 851, 915, 1023
BstH2I RGCGCY 2 cut(s) 1007, 1187
BstHHI GCGC 5 cut(s) 440, 915, 1006, 1023, 1186
BstKTI GATC 5 cut(s) 596, 972, 999, 1225, 1342
BstMAI GTCTC 4 cut(s) 566, 847, 890, 1036
BstMBI GATC 5 cut(s) 593, 969, 996, 1222, 1339
BstNI CCWGG 1 cut(s) 767
BstSCI CCNGG 6 cut(s) 222, 688, 731, 765, 980, 1283
BstSFI CTRYAG 1 cut(s) 1316
BstSLI GKGCMC 1 cut(s) 518
BstUI CGCG 3 cut(s) 851, 915, 1023
BstV1I GCAGC 7 cut(s) 324, 407, 605, 771, 1064, 1173, 1302
BstV2I GAAGAC 1 cut(s) 220
BsuRI GGCC 7 cut(s) 487, 669, 675, 794, 943, 1267, 1288
BtsCI GGATG 4 cut(s) 106, 112, 124, 401
BtsI GCAGTG 1 cut(s) 469
BtsIMutI CAGTG 1 cut(s) 469
Cac8I GCNNGC 3 cut(s) 481, 485, 652
CfoI GCGC 5 cut(s) 440, 915, 1006, 1023, 1186
Cfr10I RCCGGY 4 cut(s) 308, 483, 806, 1189
Cfr13I GGNCC 6 cut(s) 667, 674, 792, 984, 1265, 1286
CseI GACGC 2 cut(s) 343, 785
Csp6I GTAC 4 cut(s) 213, 273, 599, 934
CspAI ACCGGT 1 cut(s) 806
CviAII CATG 3 cut(s) 129, 301, 1000
CviQI GTAC 4 cut(s) 213, 273, 599, 934
DdeI CTNAG 6 cut(s) 148, 263, 541, 570, 1074, 1176
DinI GGCGCC 1 cut(s) 1005
DpnI GATC 5 cut(s) 595, 971, 998, 1224, 1341
DpnII GATC 5 cut(s) 593, 969, 996, 1222, 1339
EaeI YGGCCR 1 cut(s) 485
EciI GGCGGA 1 cut(s) 878
Eco24I GRGCYC 1 cut(s) 175
Eco31I GGTCTC 3 cut(s) 566, 847, 890
Eco47I GGWCC 1 cut(s) 984
Eco88I CYCGRG 1 cut(s) 1007
EcoO109I RGGNCCY 1 cut(s) 674
EcoRII CCWGG 1 cut(s) 765
EcoT38I GRGCYC 1 cut(s) 175
EgeI GGCGCC 1 cut(s) 1005
EheI GGCGCC 1 cut(s) 1005
FaeI CATG 3 cut(s) 132, 304, 1003
FaqI GGGAC 6 cut(s) 545, 715, 830, 918, 979, 997
FatI CATG 3 cut(s) 128, 300, 999
FauI CCCGC 7 cut(s) 111, 470, 570, 643, 856, 1088, 1207
FblI GTMKAC 2 cut(s) 534, 870
FokI GGATG 4 cut(s) 93, 99, 111, 388
FriOI GRGCYC 1 cut(s) 175
GlaI GCGC 5 cut(s) 439, 914, 1005, 1022, 1185
GsaI CCCAGC 1 cut(s) 650
GsuI CTGGAG 2 cut(s) 576, 801
HaeII RGCGCY 2 cut(s) 1007, 1187
HaeIII GGCC 7 cut(s) 487, 669, 675, 794, 943, 1267, 1288
HgaI GACGC 2 cut(s) 343, 785
HhaI GCGC 5 cut(s) 440, 915, 1006, 1023, 1186
Hin1I GRCGYC 1 cut(s) 1004
Hin1II CATG 3 cut(s) 132, 304, 1003
Hin6I GCGC 5 cut(s) 438, 913, 1004, 1021, 1184
HinP1I GCGC 5 cut(s) 438, 913, 1004, 1021, 1184
HincII GTYRAC 1 cut(s) 358
HindII GTYRAC 1 cut(s) 358
HindIII AAGCTT 1 cut(s) 477
HinfI GANTC 5 cut(s) 428, 558, 947, 977, 1362
HphI GGTGA 2 cut(s) 1162, 1229
Hpy166II GTNNAC 4 cut(s) 358, 535, 871, 993
Hpy188I TCNGA 2 cut(s) 427, 571
Hpy188III TCNNGA 5 cut(s) 773, 951, 994, 1029, 1122
Hpy8I GTNNAC 4 cut(s) 358, 535, 871, 993
Hpy99I CGWCG 2 cut(s) 617, 779
HpyAV CCTTC 4 cut(s) 53, 60, 734, 1299
HpyCH4III ACNGT 2 cut(s) 212, 1115
HpyCH4IV ACGT 3 cut(s) 879, 989, 1154
HpyCH4V TGCA 4 cut(s) 336, 504, 1318, 1380
HpyF3I CTNAG 6 cut(s) 148, 263, 541, 570, 1074, 1176
HpySE526I ACGT 3 cut(s) 879, 989, 1154
Hsp92I GRCGYC 1 cut(s) 1004
Hsp92II CATG 3 cut(s) 132, 304, 1003
HspAI GCGC 5 cut(s) 438, 913, 1004, 1021, 1184
KasI GGCGCC 1 cut(s) 1003
Kpn2I TCCGGA 1 cut(s) 1121
KpnI GGTACC 1 cut(s) 276
KroI GCCGGC 1 cut(s) 483
KroNI GCCGGC 1 cut(s) 485
Kzo9I GATC 5 cut(s) 593, 969, 996, 1222, 1339
LmnI GCTCC 5 cut(s) 428, 626, 1124, 1255, 1305
Lsp1109I GCAGC 7 cut(s) 324, 407, 605, 771, 1064, 1173, 1302
LweI GCATC 2 cut(s) 115, 1367
MaeII ACGT 3 cut(s) 879, 989, 1154
MaeIII GTNAC 5 cut(s) 1014, 1061, 1109, 1150, 1217
MalI GATC 5 cut(s) 595, 971, 998, 1224, 1341
MbiI CCGCTC 2 cut(s) 565, 1095
MboI GATC 5 cut(s) 593, 969, 996, 1222, 1339
MboII GAAGA 4 cut(s) 7, 51, 113, 220
MfeI CAATTG 2 cut(s) 695, 1381
MhlI GDGCHC 2 cut(s) 175, 518
MluCI AATT 8 cut(s) 392, 490, 695, 921, 1198, 1296, 1321, 1381
Mly113I GGCGCC 1 cut(s) 1004
MlyI GAGTC 2 cut(s) 567, 941
MroI TCCGGA 1 cut(s) 1121
MroNI GCCGGC 1 cut(s) 483
MseI TTAA 2 cut(s) 938, 1100
MslI CAYNNNNRTG 2 cut(s) 509, 998
MspA1I CMGCKG 2 cut(s) 650, 1315
MspCI CTTAAG 1 cut(s) 937
MspR9I CCNGG 6 cut(s) 224, 690, 733, 767, 982, 1285
MunI CAATTG 2 cut(s) 695, 1381
MvaI CCWGG 1 cut(s) 767
MvnI CGCG 3 cut(s) 851, 915, 1023
NaeI GCCGGC 1 cut(s) 485
NarI GGCGCC 1 cut(s) 1004
NciI CCSGG 5 cut(s) 224, 690, 733, 982, 1285
NdeII GATC 5 cut(s) 593, 969, 996, 1222, 1339
NgoMIV GCCGGC 1 cut(s) 483
NlaIII CATG 3 cut(s) 132, 304, 1003
NlaIV GGNNCC 5 cut(s) 274, 329, 985, 1005, 1126
NmeAIII GCCGAG 2 cut(s) 396, 695
NmuCI GTSAC 3 cut(s) 1014, 1150, 1217
PcsI WCGNNNNNNNCGW 2 cut(s) 423, 621
PdiI GCCGGC 1 cut(s) 485
PfeI GAWTC 3 cut(s) 428, 977, 1362
PfoI TCCNGGA 1 cut(s) 980
PinAI ACCGGT 1 cut(s) 806
PleI GAGTC 2 cut(s) 566, 941
PluTI GGCGCC 1 cut(s) 1007
PpsI GAGTC 2 cut(s) 566, 941
Ppu21I YACGTR 1 cut(s) 880
Psp6I CCWGG 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 646
PspGI CCWGG 1 cut(s) 765
PspN4I GGNNCC 5 cut(s) 274, 329, 985, 1005, 1126
PspPI GGNCC 6 cut(s) 667, 674, 792, 984, 1265, 1286
PstI CTGCAG 1 cut(s) 1320
PvuII CAGCTG 1 cut(s) 1315
RsaI GTAC 4 cut(s) 214, 274, 600, 935
RsaNI GTAC 4 cut(s) 213, 273, 599, 934
RseI CAYNNNNRTG 2 cut(s) 509, 998
SaqAI TTAA 2 cut(s) 938, 1100
Sau3AI GATC 5 cut(s) 593, 969, 996, 1222, 1339
Sau96I GGNCC 6 cut(s) 667, 674, 792, 984, 1265, 1286
SchI GAGTC 2 cut(s) 567, 941
ScrFI CCNGG 6 cut(s) 224, 690, 733, 767, 982, 1285
SduI GDGCHC 2 cut(s) 175, 518
SfaNI GCATC 2 cut(s) 115, 1367
SfcI CTRYAG 1 cut(s) 1316
SfoI GGCGCC 1 cut(s) 1005
SinI GGWCC 1 cut(s) 984
SmiMI CAYNNNNRTG 2 cut(s) 509, 998
SmlI CTYRAG 2 cut(s) 937, 949
SmoI CTYRAG 2 cut(s) 937, 949
Sse9I AATT 8 cut(s) 392, 490, 695, 921, 1198, 1296, 1321, 1381
SspDI GGCGCC 1 cut(s) 1003
SspI AATATT 1 cut(s) 67
StyD4I CCNGG 6 cut(s) 222, 688, 731, 765, 980, 1283
TaaI ACNGT 2 cut(s) 212, 1115
TaiI ACGT 3 cut(s) 882, 992, 1157
TaqI TCGA 2 cut(s) 741, 774
TasI AATT 8 cut(s) 392, 490, 695, 921, 1198, 1296, 1321, 1381
TauI GCSGC 3 cut(s) 249, 913, 1139
TfiI GAWTC 3 cut(s) 428, 977, 1362
Tru1I TTAA 2 cut(s) 938, 1100
Tru9I TTAA 2 cut(s) 938, 1100
TscAI CASTG 1 cut(s) 476
TseFI GTSAC 3 cut(s) 1014, 1150, 1217
TseI GCWGC 7 cut(s) 312, 420, 618, 759, 1052, 1186, 1315
Tsp45I GTSAC 3 cut(s) 1014, 1150, 1217
TspDTI ATGAA 2 cut(s) 113, 286
TspGWI ACGGA 3 cut(s) 586, 613, 915
TspRI CASTG 1 cut(s) 476
Vha464I CTTAAG 1 cut(s) 937
VpaK11BI GGWCC 1 cut(s) 984
XapI RAATTY 3 cut(s) 490, 921, 1321
XmiI GTMKAC 2 cut(s) 534, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.