AtCASP,CASP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18480 |
| fragaria_vesca | FvH4_5g12492 FvH4_5g12492 FvH4_5g12492 |
| malus_domestica | MD10G1081900.v1.1 |
| prunus_persica | Prupe.8G104400_v2.0.a1 |
| pyrus_communis | pycom05g06100 |
| rosa_chinensis | RchiOBHm_Chr7g0184861 |
| rosa_laevigata | RLG00000004948 |
| rosa_multiflora | Rmu_ssc0000289.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00269320 |
| rosa_rugosa | Rorug06G0465500 |
| rosa_samantha | Rh7AG077400 Rh7BG069900 Rh7CG070700 Rh7DG070100 |
| rosa_wichuraiana | Rw7G005800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1143 |
| AarI | CACCTGC | 1 cut(s) | 1961 |
| Acc36I | ACCTGC | 1 cut(s) | 1961 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 78, 1360 |
| AccBSI | CCGCTC | 1 cut(s) | 502 |
| AciI | CCGC | 8 cut(s) | 14, 21, 172, 182, 502, 508, 1052, 1872 |
| AclI | AACGTT | 1 cut(s) | 971 |
| AclWI | GGATC | 5 cut(s) | 341, 1434, 1711, 1731, 1830 |
| AcoI | YGGCCR | 1 cut(s) | 1079 |
| AcsI | RAATTY | 5 cut(s) | 293, 440, 904, 1122, 1407 |
| AcuI | CTGAAG | 3 cut(s) | 1055, 1179, 1397 |
| AfaI | GTAC | 1 cut(s) | 1763 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 20, 78, 1234, 1360 |
| AflII | CTTAAG | 1 cut(s) | 1511 |
| Alw21I | GWGCWC | 2 cut(s) | 718, 1248 |
| Alw26I | GTCTC | 3 cut(s) | 73, 1212, 1553 |
| AlwI | GGATC | 5 cut(s) | 341, 1434, 1711, 1731, 1830 |
| AoxI | GGCC | 1 cut(s) | 1079 |
| ApeKI | GCWGC | 3 cut(s) | 1043, 1799, 1869 |
| ApoI | RAATTY | 5 cut(s) | 293, 440, 904, 1122, 1407 |
| AseI | ATTAAT | 1 cut(s) | 1349 |
| AspLEI | GCGC | 1 cut(s) | 361 |
| AspS9I | GGNCC | 3 cut(s) | 601, 1388, 1489 |
| AsuHPI | GGTGA | 2 cut(s) | 204, 1942 |
| AvaII | GGWCC | 3 cut(s) | 601, 1388, 1489 |
| BanII | GRGCYC | 2 cut(s) | 787, 1248 |
| BbsI | GAAGAC | 1 cut(s) | 496 |
| Bbv12I | GWGCWC | 2 cut(s) | 718, 1248 |
| BbvI | GCAGC | 3 cut(s) | 1030, 1811, 1881 |
| BccI | CCATC | 4 cut(s) | 65, 520, 760, 1295 |
| BceAI | ACGGC | 3 cut(s) | 809, 1094, 1438 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 695, 729, 1788, 1822, 1915, 1949 |
| BcoDI | GTCTC | 3 cut(s) | 73, 1212, 1553 |
| BfaI | CTAG | 7 cut(s) | 192, 401, 891, 1289, 1440, 1698, 2047 |
| BfmI | CTRYAG | 1 cut(s) | 1716 |
| BfoI | RGCGCY | 1 cut(s) | 362 |
| BfrI | CTTAAG | 1 cut(s) | 1511 |
| BfuAI | ACCTGC | 1 cut(s) | 1961 |
| BisI | GCNGC | 3 cut(s) | 1044, 1800, 1870 |
| BlpI | GCTNAGC | 1 cut(s) | 375 |
| BlsI | GCNGC | 3 cut(s) | 1045, 1801, 1871 |
| Bme18I | GGWCC | 3 cut(s) | 601, 1388, 1489 |
| BmgT120I | GGNCC | 3 cut(s) | 601, 1388, 1489 |
| BmiI | GGNNCC | 3 cut(s) | 342, 506, 1483 |
| BmrI | ACTGGG | 1 cut(s) | 1432 |
| BmsI | GCATC | 1 cut(s) | 1289 |
| BmuI | ACTGGG | 1 cut(s) | 1432 |
| BpiI | GAAGAC | 1 cut(s) | 496 |
| BpmI | CTGGAG | 1 cut(s) | 327 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 375 |
| BpuEI | CTTGAG | 4 cut(s) | 617, 827, 920, 1573 |
| Bsa29I | ATCGAT | 1 cut(s) | 1537 |
| BsaBI | GATNNNNATC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 2 cut(s) | 750, 1485 |
| BsaWI | WCCGGW | 1 cut(s) | 1227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2016, 2046 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 20, 78, 1234, 1360 |
| Bse1I | ACTGG | 4 cut(s) | 511, 1098, 1427, 1620 |
| Bse3DI | GCAATG | 2 cut(s) | 930, 1996 |
| Bse8I | GATNNNNATC | 1 cut(s) | 351 |
| BseCI | ATCGAT | 1 cut(s) | 1537 |
| BseDI | CCNNGG | 2 cut(s) | 750, 1485 |
| BseGI | GGATG | 6 cut(s) | 124, 775, 1280, 1372, 1786, 2008 |
| BseJI | GATNNNNATC | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 20, 78, 1234, 1360 |
| BseMI | GCAATG | 2 cut(s) | 930, 1996 |
| BseMII | CTCAG | 5 cut(s) | 366, 800, 1449, 1758, 1999 |
| BseNI | ACTGG | 4 cut(s) | 511, 1098, 1427, 1620 |
| BseRI | GAGGAG | 1 cut(s) | 40 |
| BseXI | GCAGC | 3 cut(s) | 1030, 1811, 1881 |
| BshFI | GGCC | 1 cut(s) | 1081 |
| BshVI | ATCGAT | 1 cut(s) | 1537 |
| BsiHKAI | GWGCWC | 2 cut(s) | 718, 1248 |
| BsiSI | CCGG | 1 cut(s) | 1228 |
| BslFI | GGGAC | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 20, 78, 1234, 1360 |
| BsmAI | GTCTC | 3 cut(s) | 73, 1212, 1553 |
| BsmBI | CGTCTC | 1 cut(s) | 73 |
| BsmFI | GGGAC | 1 cut(s) | 47 |
| BsmI | GAATGC | 3 cut(s) | 310, 1024, 1468 |
| BsnI | GGCC | 1 cut(s) | 1081 |
| Bsp1286I | GDGCHC | 3 cut(s) | 718, 787, 1248 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 375 |
| BspACI | CCGC | 8 cut(s) | 14, 21, 172, 182, 502, 508, 1052, 1872 |
| BspANI | GGCC | 1 cut(s) | 1081 |
| BspCNI | CTCAG | 5 cut(s) | 367, 799, 1450, 1757, 1998 |
| BspDI | ATCGAT | 1 cut(s) | 1537 |
| BspLI | GGNNCC | 3 cut(s) | 342, 506, 1483 |
| BspMAI | CTGCAG | 1 cut(s) | 1720 |
| BspMI | ACCTGC | 1 cut(s) | 1961 |
| BspPI | GGATC | 5 cut(s) | 341, 1434, 1711, 1731, 1830 |
| BspQI | GCTCTTC | 1 cut(s) | 492 |
| BspTI | CTTAAG | 1 cut(s) | 1511 |
| BsrBI | CCGCTC | 1 cut(s) | 502 |
| BsrDI | GCAATG | 2 cut(s) | 930, 1996 |
| BsrI | ACTGG | 4 cut(s) | 511, 1098, 1427, 1620 |
| BssECI | CCNNGG | 2 cut(s) | 750, 1485 |
| BssT1I | CCWWGG | 1 cut(s) | 1485 |
| Bst4CI | ACNGT | 5 cut(s) | 656, 1324, 1481, 1609, 1679 |
| Bst6I | CTCTTC | 5 cut(s) | 492, 573, 723, 1182, 1215 |
| BstAFI | CTTAAG | 1 cut(s) | 1511 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 4 cut(s) | 180, 363, 1131, 1716 |
| BstDEI | CTNAG | 8 cut(s) | 248, 282, 375, 786, 1458, 1744, 1865, 1985 |
| BstEII | GGTNACC | 1 cut(s) | 254 |
| BstF5I | GGATG | 6 cut(s) | 124, 775, 1280, 1372, 1786, 2008 |
| BstH2I | RGCGCY | 1 cut(s) | 362 |
| BstHHI | GCGC | 1 cut(s) | 361 |
| BstMAI | GTCTC | 3 cut(s) | 73, 1212, 1553 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1049, 1986 |
| BstNSI | RCATGY | 1 cut(s) | 2042 |
| BstPI | GGTNACC | 1 cut(s) | 254 |
| BstSFI | CTRYAG | 1 cut(s) | 1716 |
| BstV1I | GCAGC | 3 cut(s) | 1030, 1811, 1881 |
| BstV2I | GAAGAC | 1 cut(s) | 496 |
| BstX2I | RGATCY | 3 cut(s) | 346, 1426, 1723 |
| BstYI | RGATCY | 3 cut(s) | 346, 1426, 1723 |
| Bsu15I | ATCGAT | 1 cut(s) | 1537 |
| BsuRI | GGCC | 1 cut(s) | 1081 |
| BsuTUI | ATCGAT | 1 cut(s) | 1537 |
| BtsCI | GGATG | 6 cut(s) | 124, 775, 1280, 1372, 1786, 2008 |
| BtsI | GCAGTG | 2 cut(s) | 1022, 1453 |
| BtsIMutI | CAGTG | 5 cut(s) | 661, 858, 1022, 1453, 1614 |
| BveI | ACCTGC | 1 cut(s) | 1961 |
| Cac8I | GCNNGC | 4 cut(s) | 180, 363, 1131, 1716 |
| CfoI | GCGC | 1 cut(s) | 361 |
| Cfr13I | GGNCC | 3 cut(s) | 601, 1388, 1489 |
| ClaI | ATCGAT | 1 cut(s) | 1537 |
| CseI | GACGC | 2 cut(s) | 198, 883 |
| Csp6I | GTAC | 1 cut(s) | 1762 |
| CviAII | CATG | 3 cut(s) | 946, 1241, 2039 |
| CviQI | GTAC | 1 cut(s) | 1762 |
| DdeI | CTNAG | 8 cut(s) | 248, 282, 375, 786, 1458, 1744, 1865, 1985 |
| DraI | TTTAAA | 1 cut(s) | 465 |
| EaeI | YGGCCR | 1 cut(s) | 1079 |
| Eam1104I | CTCTTC | 5 cut(s) | 492, 573, 723, 1182, 1215 |
| EarI | CTCTTC | 5 cut(s) | 492, 573, 723, 1182, 1215 |
| EciI | GGCGGA | 2 cut(s) | 36, 187 |
| Ecl136II | GAGCTC | 1 cut(s) | 1246 |
| Eco130I | CCWWGG | 1 cut(s) | 1485 |
| Eco24I | GRGCYC | 2 cut(s) | 787, 1248 |
| Eco32I | GATATC | 1 cut(s) | 1311 |
| Eco47I | GGWCC | 3 cut(s) | 601, 1388, 1489 |
| Eco53kI | GAGCTC | 1 cut(s) | 1246 |
| Eco57I | CTGAAG | 3 cut(s) | 1055, 1179, 1397 |
| Eco91I | GGTNACC | 1 cut(s) | 254 |
| EcoICRI | GAGCTC | 1 cut(s) | 1246 |
| EcoO109I | RGGNCCY | 1 cut(s) | 601 |
| EcoO65I | GGTNACC | 1 cut(s) | 254 |
| EcoRI | GAATTC | 3 cut(s) | 440, 904, 1407 |
| EcoRV | GATATC | 1 cut(s) | 1311 |
| EcoT14I | CCWWGG | 1 cut(s) | 1485 |
| EcoT38I | GRGCYC | 2 cut(s) | 787, 1248 |
| ErhI | CCWWGG | 1 cut(s) | 1485 |
| Esp3I | CGTCTC | 1 cut(s) | 73 |
| FaeI | CATG | 3 cut(s) | 949, 1244, 2042 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 417, 449 |
| FaqI | GGGAC | 1 cut(s) | 47 |
| FatI | CATG | 3 cut(s) | 945, 1240, 2038 |
| Fnu4HI | GCNGC | 3 cut(s) | 1044, 1800, 1870 |
| FokI | GGATG | 6 cut(s) | 131, 782, 1267, 1379, 1793, 2015 |
| FriOI | GRGCYC | 2 cut(s) | 787, 1248 |
| Fsp4HI | GCNGC | 3 cut(s) | 1044, 1800, 1870 |
| FspBI | CTAG | 7 cut(s) | 192, 401, 891, 1289, 1440, 1698, 2047 |
| GlaI | GCGC | 1 cut(s) | 360 |
| GluI | GCNGC | 3 cut(s) | 1044, 1800, 1870 |
| GsuI | CTGGAG | 1 cut(s) | 327 |
| HaeII | RGCGCY | 1 cut(s) | 362 |
| HaeIII | GGCC | 1 cut(s) | 1081 |
| HapII | CCGG | 1 cut(s) | 1228 |
| HgaI | GACGC | 2 cut(s) | 198, 883 |
| HhaI | GCGC | 1 cut(s) | 361 |
| Hin1II | CATG | 3 cut(s) | 949, 1244, 2042 |
| Hin6I | GCGC | 1 cut(s) | 359 |
| HinP1I | GCGC | 1 cut(s) | 359 |
| HincII | GTYRAC | 1 cut(s) | 1605 |
| HindII | GTYRAC | 1 cut(s) | 1605 |
| HindIII | AAGCTT | 1 cut(s) | 176 |
| HinfI | GANTC | 7 cut(s) | 24, 404, 884, 1205, 1539, 1657, 1754 |
| HpaI | GTTAAC | 1 cut(s) | 1605 |
| HpaII | CCGG | 1 cut(s) | 1228 |
| HphI | GGTGA | 2 cut(s) | 204, 1942 |
| Hpy166II | GTNNAC | 2 cut(s) | 1605, 1950 |
| Hpy8I | GTNNAC | 2 cut(s) | 1605, 1950 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 7 cut(s) | 94, 811, 1252, 1372, 1387, 1579, 1813 |
| HpyCH4III | ACNGT | 5 cut(s) | 656, 1324, 1481, 1609, 1679 |
| HpyCH4IV | ACGT | 3 cut(s) | 640, 971, 1876 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1049, 1986 |
| HpyF3I | CTNAG | 8 cut(s) | 248, 282, 375, 786, 1458, 1744, 1865, 1985 |
| HpySE526I | ACGT | 3 cut(s) | 640, 971, 1876 |
| Hsp92II | CATG | 3 cut(s) | 949, 1244, 2042 |
| HspAI | GCGC | 1 cut(s) | 359 |
| KspAI | GTTAAC | 1 cut(s) | 1605 |
| LguI | GCTCTTC | 1 cut(s) | 492 |
| LmnI | GCTCC | 4 cut(s) | 346, 1237, 1443, 1598 |
| Lsp1109I | GCAGC | 3 cut(s) | 1030, 1811, 1881 |
| LweI | GCATC | 1 cut(s) | 1289 |
| MaeI | CTAG | 7 cut(s) | 192, 401, 891, 1289, 1440, 1698, 2047 |
| MaeII | ACGT | 3 cut(s) | 640, 971, 1876 |
| MaeIII | GTNAC | 2 cut(s) | 210, 254 |
| MbiI | CCGCTC | 1 cut(s) | 502 |
| MfeI | CAATTG | 5 cut(s) | 620, 698, 1149, 1179, 1253 |
| MflI | RGATCY | 3 cut(s) | 346, 1426, 1723 |
| MhlI | GDGCHC | 3 cut(s) | 718, 787, 1248 |
| MlyI | GAGTC | 1 cut(s) | 1214 |
| MmeI | TCCRAC | 1 cut(s) | 1341 |
| MspA1I | CMGCKG | 1 cut(s) | 1872 |
| MspCI | CTTAAG | 1 cut(s) | 1511 |
| MspI | CCGG | 1 cut(s) | 1228 |
| MunI | CAATTG | 5 cut(s) | 620, 698, 1149, 1179, 1253 |
| Mva1269I | GAATGC | 3 cut(s) | 310, 1024, 1468 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 371, 625, 1049, 1986 |
| NlaIII | CATG | 3 cut(s) | 949, 1244, 2042 |
| NlaIV | GGNNCC | 3 cut(s) | 342, 506, 1483 |
| NmuCI | GTSAC | 1 cut(s) | 210 |
| NspI | RCATGY | 1 cut(s) | 2042 |
| PaqCI | CACCTGC | 1 cut(s) | 1961 |
| PciSI | GCTCTTC | 1 cut(s) | 492 |
| PctI | GAATGC | 3 cut(s) | 310, 1024, 1468 |
| PfeI | GAWTC | 6 cut(s) | 24, 404, 884, 1539, 1657, 1754 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 78, 1360 |
| PkrI | GCNGC | 3 cut(s) | 1045, 1801, 1871 |
| PleI | GAGTC | 1 cut(s) | 1213 |
| PpsI | GAGTC | 1 cut(s) | 1213 |
| PpuMI | RGGWCCY | 1 cut(s) | 601 |
| PshBI | ATTAAT | 1 cut(s) | 1349 |
| PsiI | TTATAA | 1 cut(s) | 1143 |
| Psp124BI | GAGCTC | 1 cut(s) | 1248 |
| Psp1406I | AACGTT | 1 cut(s) | 971 |
| Psp5II | RGGWCCY | 1 cut(s) | 601 |
| PspEI | GGTNACC | 1 cut(s) | 254 |
| PspN4I | GGNNCC | 3 cut(s) | 342, 506, 1483 |
| PspPI | GGNCC | 3 cut(s) | 601, 1388, 1489 |
| PspPPI | RGGWCCY | 1 cut(s) | 601 |
| PstI | CTGCAG | 1 cut(s) | 1720 |
| PsuI | RGATCY | 3 cut(s) | 346, 1426, 1723 |
| RsaI | GTAC | 1 cut(s) | 1763 |
| RsaNI | GTAC | 1 cut(s) | 1762 |
| SacI | GAGCTC | 1 cut(s) | 1248 |
| SapI | GCTCTTC | 1 cut(s) | 492 |
| SatI | GCNGC | 3 cut(s) | 1044, 1800, 1870 |
| Sau96I | GGNCC | 3 cut(s) | 601, 1388, 1489 |
| SchI | GAGTC | 1 cut(s) | 1214 |
| SduI | GDGCHC | 3 cut(s) | 718, 787, 1248 |
| SfaNI | GCATC | 1 cut(s) | 1289 |
| SfcI | CTRYAG | 1 cut(s) | 1716 |
| SinI | GGWCC | 3 cut(s) | 601, 1388, 1489 |
| SmlI | CTYRAG | 5 cut(s) | 596, 806, 899, 1511, 1552 |
| SmoI | CTYRAG | 5 cut(s) | 596, 806, 899, 1511, 1552 |
| SsiI | CCGC | 8 cut(s) | 14, 21, 172, 182, 502, 508, 1052, 1872 |
| SspI | AATATT | 1 cut(s) | 961 |
| SspMI | CTAG | 7 cut(s) | 192, 401, 891, 1289, 1440, 1698, 2047 |
| SstI | GAGCTC | 1 cut(s) | 1248 |
| StyI | CCWWGG | 1 cut(s) | 1485 |
| TaaI | ACNGT | 5 cut(s) | 656, 1324, 1481, 1609, 1679 |
| TaiI | ACGT | 3 cut(s) | 643, 974, 1879 |
| TaqI | TCGA | 6 cut(s) | 27, 705, 1218, 1537, 1757, 1808 |
| TatI | WGTACW | 1 cut(s) | 1761 |
| TfiI | GAWTC | 6 cut(s) | 24, 404, 884, 1539, 1657, 1754 |
| TscAI | CASTG | 5 cut(s) | 661, 865, 1029, 1453, 1614 |
| TseFI | GTSAC | 1 cut(s) | 210 |
| TseI | GCWGC | 3 cut(s) | 1043, 1799, 1869 |
| Tsp45I | GTSAC | 1 cut(s) | 210 |
| TspDTI | ATGAA | 7 cut(s) | 231, 437, 741, 786, 996, 1073, 1350 |
| TspGWI | ACGGA | 1 cut(s) | 52 |
| TspRI | CASTG | 5 cut(s) | 661, 865, 1029, 1453, 1614 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 78, 1360 |
| Vha464I | CTTAAG | 1 cut(s) | 1511 |
| VpaK11BI | GGWCC | 3 cut(s) | 601, 1388, 1489 |
| VspI | ATTAAT | 1 cut(s) | 1349 |
| XapI | RAATTY | 5 cut(s) | 293, 440, 904, 1122, 1407 |
| XbaI | TCTAGA | 1 cut(s) | 1697 |
| XceI | RCATGY | 1 cut(s) | 2042 |
| XspI | CTAG | 7 cut(s) | 192, 401, 891, 1289, 1440, 1698, 2047 |