pycom05g22220

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
24662402 .. 24665242
2841 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g22220.2

Sequence Viewer

Length: 2007 bp
ATGAAGAAATGCATATATATTAATCAGCGAAGACATAGTACACTTCCAAGCTCGAGCAGGACAAGGACTAACAGCATGAAAAACAGAAAGAGCAAAAACATAGACAACAAAGAAAAAAAATCTTACTTCCTCATGCACATAAGATACCAACTTTATACAATTTTCAAATCCTACCATTGTAGGAGTTTGAGACCCTCTTGTCTCACATTGGTCAACATAATTAGAACTTGGATCATTTGGAAATGGGTTGAAGGCTTGTGGTTGTGTGGATTAGGGCTTTGGGGCACTTGGGGCCAAGGAATTAAAATTGATTTGATCAATTATTGTAAAGCTTCAGATACATCCAAAAGGTGTTTGAAGAGGTATGAAAGAGCCTATATAACTGGAGTCCTCAGTTCCATCAAAAAATCATCTTTTTCTTCCCCTTTGTCTTTCGTACAAAATTTCTATAGAGTAAACACACAAAGCAATCTGCTAGAGTTCTATAATCCAATGCGGGTTGTAGAATTAGGTAGTTGTATCCTGGTCGAGCAGACGTTCGTTTGCGCTAGCCTCTACCTTCAATTCATTCAAGTTAGTATCATTTTAACTTTTTGTTACTATAACATAATTGCATTCTTTCTGTATTTCTGTTATTTTATTGTTTCCAAATTGTTCTCCAACAACCATATCCAGTCATCTATAGAAAGTAACAAGTTTAGTGGCCATTTACCACAGCGGTGGAAAGGTGTTGAACTCTTACATGATGGTGTGAGTTCAAACCCCATCGTAAATTTAAAAAAAAAAAAAAACATGGTAACTAACATTAGCATGGTGTTCGTAAAAATAAACAAAAATCCCACATATAAATCATCCTCACTTGCATTGCAAAATGCCTCTTTCTTCTCTCTTCCAATCCCTTTCATCAGTTATGATTTATTTTCCACAGACAGCGATCTCATCCATTCATCATTATCATCTGCTCCTACGCGGATTCACCAGAATTCGAAAAATTCCATGGAAAATTCCCCCTCCCCACTTGCACGTTCCCTTCGATTTCATGGTTCAGGACGTGTTTCAAACACAATAATACATCGTGGAAAGTTATACTTCGAGTATTCCAAACCCAATAATACATCATGGAACGTTCTCCTAATCTCAATTACAATTCGACCAGCAAACATATATTCATACCAAAATCATCAGTATATACAACCAATAAAGTCATACACCCTTCCATTATTGCTTCAACTACGTAAGAGGAATGACTCTTTGCGAGTAAAGAACTTGACTACCTCATCGGGCAGCAGTCTTGCAAGTTGCAAACCTGTAAATTACAATCTTAGTAACCTGCCAAGTCTAAATTTTCTTGATCTCGGGTTGAATTATGACTTATCTTTTAGAAACTTGAATTGGCTTTCTCACCTCTCTTCCCTTAACATGTTTCCTTCGTTATTAGAGTTATATTTATCTTTTTGCCAAATTGAAAGCCTTCCAGTCTCACTACAGAGGATTAACTTGACATCACTTTTGATCCTTGATATGTTCCTCATAAAGCTTGATCTGTCCGGGAATAATTTCAGTGGTCCATTTCCAAGTGAATTGGCAAACTTCAAATCTCTGAAATACCTTGATTTATCTTATACTGGCCTAAAAGTTCACAATCCCAAGGGCATTGGAAATTCATGCAAGCTAAAGTTCTTAAGTCTTACACAAAACTATTTGTGGGTTGACGTGTCTCACAACCAATTTTGTGAAAACTTTCCATCCCATTTGAAATTTCAAAATTTAAAGACTATTGATTTAAGTGATAATCAGTTGGAGGAACCACTCCAACTTTGGTGGTCCAGTAATGTCTCTTCCCTTGATTTTGAAAGCAATCTATTTTTCGGACCTTTTCCTTGGAATATTGACCAGATGATGCCCAATTTGATAGATTTGTATCTTTCTGAGAATCATTTGAATGACACTATTCTTCCTTTTATCTACAACATGCAACTTGGGTTCTTGCCTCTAAGAAGCAATTAA

Protein Analysis

669

Amino Acids

77.21

Weight (kDa)

9.55

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022518)

Species Orthologous Gene IDs
pyrus_communis pycom01g00410 pycom01g03590 pycom05g22220 pycom05g22240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 198
Acc36I ACCTGC 1 cut(s) 1338
AccII CGCG 1 cut(s) 970
AciI CCGC 3 cut(s) 496, 718, 970
AclI AACGTT 1 cut(s) 1125
AclWI GGATC 2 cut(s) 239, 1507
AcoI YGGCCR 1 cut(s) 703
AcsI RAATTY 9 cut(s) 442, 772, 982, 991, 1003, 1342, 1660, 1757, 1765
AcuI CTGAAG 1 cut(s) 318
AfaI GTAC 2 cut(s) 40, 438
AflII CTTAAG 1 cut(s) 1681
AflIII ACRYGT 3 cut(s) 1051, 1419, 1713
AjiI CACGTC 2 cut(s) 1052, 1714
AjnI CCWGG 1 cut(s) 522
AjuI GAANNNNNNNTTGG 2 cut(s) 1375, 1407
AleI CACNNNNGTG 1 cut(s) 718
AluBI AGCT 4 cut(s) 51, 332, 1537, 1672
AluI AGCT 4 cut(s) 51, 332, 1537, 1672
Alw26I GTCTC 5 cut(s) 184, 206, 1483, 1722, 1840
AlwI GGATC 2 cut(s) 239, 1507
Ama87I CYCGRG 2 cut(s) 52, 1355
AoxI GGCC 3 cut(s) 292, 703, 1627
ApeKI GCWGC 1 cut(s) 1284
ApoI RAATTY 9 cut(s) 442, 772, 982, 991, 1003, 1342, 1660, 1757, 1765
ArsI GACNNNNNNTTYG 2 cut(s) 1492, 1524
AseI ATTAAT 1 cut(s) 21
Asp700I GAANNNNTTC 3 cut(s) 1470, 1556, 1740
AspLEI GCGC 1 cut(s) 548
AspS9I GGNCC 4 cut(s) 292, 1565, 1824, 1871
AsuC2I CCSGG 1 cut(s) 1549
AsuHPI GGTGA 2 cut(s) 968, 1394
AsuII TTCGAA 1 cut(s) 986
AsuNHI GCTAGC 1 cut(s) 548
AvaI CYCGRG 2 cut(s) 52, 1355
AvaII GGWCC 3 cut(s) 1565, 1824, 1871
BaeGI GKGCMC 1 cut(s) 287
BalI TGGCCA 1 cut(s) 705
BarI GAAGNNNNNNTAC 4 cut(s) 22, 54, 1822, 1854
BbsI GAAGAC 1 cut(s) 37
BbvI GCAGC 1 cut(s) 1296
BccI CCATC 4 cut(s) 407, 740, 773, 1753
BcgI CGANNNNNNTGC 2 cut(s) 799, 833
BciT130I CCWGG 1 cut(s) 524
BciVI GTATCC 1 cut(s) 530
BclI TGATCA 1 cut(s) 315
BcnI CCSGG 1 cut(s) 1549
BcoDI GTCTC 5 cut(s) 184, 206, 1483, 1722, 1840
BfaI CTAG 2 cut(s) 476, 549
BfmI CTRYAG 3 cut(s) 448, 681, 1484
BfrI CTTAAG 1 cut(s) 1681
BfuAI ACCTGC 1 cut(s) 1338
BfuI GTATCC 1 cut(s) 530
BisI GCNGC 1 cut(s) 1285
BlsI GCNGC 1 cut(s) 1286
Bme1390I CCNGG 2 cut(s) 524, 1549
Bme18I GGWCC 3 cut(s) 1565, 1824, 1871
BmeT110I CYCGRG 2 cut(s) 52, 1355
BmgBI CACGTC 2 cut(s) 1052, 1714
BmgT120I GGNCC 4 cut(s) 292, 1565, 1824, 1871
BmiI GGNNCC 2 cut(s) 293, 1806
BmrFI CCNGG 2 cut(s) 524, 1549
BmsI GCATC 1 cut(s) 1890
BmtI GCTAGC 1 cut(s) 552
BpiI GAAGAC 1 cut(s) 37
BpmI CTGGAG 1 cut(s) 405
Bpu14I TTCGAA 1 cut(s) 986
BpuMI CCSGG 1 cut(s) 1549
BsaAI YACGTR 1 cut(s) 1235
BsaBI GATNNNNATC 1 cut(s) 1920
BsaI GGTCTC 1 cut(s) 184
BsaJI CCNNGG 4 cut(s) 295, 996, 1647, 1880
Bse1I ACTGG 5 cut(s) 388, 673, 1475, 1630, 1827
Bse3DI GCAATG 1 cut(s) 863
Bse8I GATNNNNATC 1 cut(s) 1920
BseBI CCWGG 1 cut(s) 524
BseDI CCNNGG 4 cut(s) 295, 996, 1647, 1880
BseGI GGATG 4 cut(s) 341, 851, 939, 1745
BseJI GATNNNNATC 1 cut(s) 1920
BseMI GCAATG 1 cut(s) 863
BseMII CTCAG 2 cut(s) 406, 1920
BseNI ACTGG 5 cut(s) 388, 673, 1475, 1630, 1827
BseSI GKGCMC 1 cut(s) 287
BseXI GCAGC 1 cut(s) 1296
Bsh1236I CGCG 1 cut(s) 970
BshFI GGCC 3 cut(s) 294, 705, 1629
BsiHKCI CYCGRG 2 cut(s) 52, 1355
BsiSI CCGG 1 cut(s) 1548
BsmAI GTCTC 5 cut(s) 184, 206, 1483, 1722, 1840
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 3 cut(s) 294, 705, 1629
Bso31I GGTCTC 1 cut(s) 184
BsoBI CYCGRG 2 cut(s) 52, 1355
Bsp119I TTCGAA 1 cut(s) 986
Bsp1286I GDGCHC 1 cut(s) 287
Bsp143I GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
Bsp19I CCATGG 1 cut(s) 996
BspACI CCGC 3 cut(s) 496, 718, 970
BspANI GGCC 3 cut(s) 294, 705, 1629
BspCNI CTCAG 2 cut(s) 405, 1921
BspFNI CGCG 1 cut(s) 970
BspLI GGNNCC 2 cut(s) 293, 1806
BspMI ACCTGC 1 cut(s) 1338
BspOI GCTAGC 1 cut(s) 552
BspPI GGATC 2 cut(s) 239, 1507
BspT104I TTCGAA 1 cut(s) 986
BspTI CTTAAG 1 cut(s) 1681
BspTNI GGTCTC 1 cut(s) 184
BsrDI GCAATG 1 cut(s) 863
BsrI ACTGG 5 cut(s) 388, 673, 1475, 1630, 1827
BssECI CCNNGG 4 cut(s) 295, 996, 1647, 1880
BssMI GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
BssT1I CCWWGG 4 cut(s) 295, 996, 1647, 1880
Bst2UI CCWGG 1 cut(s) 524
Bst6I CTCTTC 4 cut(s) 353, 894, 1414, 1843
BstAFI CTTAAG 1 cut(s) 1681
BstBAI YACGTR 1 cut(s) 1235
BstBI TTCGAA 1 cut(s) 986
BstC8I GCNNGC 2 cut(s) 550, 1670
BstDEI CTNAG 4 cut(s) 392, 1322, 1929, 1994
BstDSI CCRYGG 1 cut(s) 996
BstF5I GGATG 4 cut(s) 341, 851, 939, 1745
BstFNI CGCG 1 cut(s) 970
BstHHI GCGC 1 cut(s) 548
BstKTI GATC 6 cut(s) 234, 318, 937, 1354, 1515, 1543
BstMAI GTCTC 5 cut(s) 184, 206, 1483, 1722, 1840
BstMBI GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
BstMWI GCNNNNNNNGC 1 cut(s) 291
BstNI CCWGG 1 cut(s) 524
BstNSI RCATGY 2 cut(s) 1423, 1975
BstSCI CCNGG 2 cut(s) 522, 1547
BstSFI CTRYAG 3 cut(s) 448, 681, 1484
BstSLI GKGCMC 1 cut(s) 287
BstSNI TACGTA 1 cut(s) 1235
BstUI CGCG 1 cut(s) 970
BstV1I GCAGC 1 cut(s) 1296
BstV2I GAAGAC 1 cut(s) 37
BstXI CCANNNNNNTGG 1 cut(s) 720
BsuI GTATCC 1 cut(s) 530
BsuRI GGCC 3 cut(s) 294, 705, 1629
BtgI CCRYGG 1 cut(s) 996
BtrI CACGTC 2 cut(s) 1052, 1714
BtsCI GGATG 4 cut(s) 341, 851, 939, 1745
BtsIMutI CAGTG 1 cut(s) 1567
BveI ACCTGC 1 cut(s) 1338
Cac8I GCNNGC 2 cut(s) 550, 1670
CfoI GCGC 1 cut(s) 548
Cfr13I GGNCC 4 cut(s) 292, 1565, 1824, 1871
Csp6I GTAC 2 cut(s) 39, 437
CspCI CAANNNNNGTGG 4 cut(s) 682, 717, 1802, 1837
CviQI GTAC 2 cut(s) 39, 437
DdeI CTNAG 4 cut(s) 392, 1322, 1929, 1994
DpnI GATC 6 cut(s) 233, 317, 936, 1353, 1514, 1542
DpnII GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
DraI TTTAAA 2 cut(s) 777, 1770
DrdI GACNNNNNNGTC 1 cut(s) 198
DseDI GACNNNNNNGTC 1 cut(s) 198
EaeI YGGCCR 1 cut(s) 703
Eam1104I CTCTTC 4 cut(s) 353, 894, 1414, 1843
EarI CTCTTC 4 cut(s) 353, 894, 1414, 1843
Eco105I TACGTA 1 cut(s) 1235
Eco130I CCWWGG 4 cut(s) 295, 996, 1647, 1880
Eco31I GGTCTC 1 cut(s) 184
Eco47I GGWCC 3 cut(s) 1565, 1824, 1871
Eco57I CTGAAG 1 cut(s) 318
Eco88I CYCGRG 2 cut(s) 52, 1355
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 1 cut(s) 522
EcoT14I CCWWGG 4 cut(s) 295, 996, 1647, 1880
EcoT22I ATGCAT 1 cut(s) 14
ErhI CCWWGG 4 cut(s) 295, 996, 1647, 1880
FalI AAGNNNNNCTT 2 cut(s) 1073, 1105
FauI CCCGC 1 cut(s) 489
FbaI TGATCA 1 cut(s) 315
Fnu4HI GCNGC 1 cut(s) 1285
FokI GGATG 4 cut(s) 328, 838, 926, 1732
Fsp4HI GCNGC 1 cut(s) 1285
FspBI CTAG 2 cut(s) 476, 549
GlaI GCGC 1 cut(s) 547
GluI GCNGC 1 cut(s) 1285
GsuI CTGGAG 1 cut(s) 405
HaeIII GGCC 3 cut(s) 294, 705, 1629
HapII CCGG 1 cut(s) 1548
HhaI GCGC 1 cut(s) 548
Hin6I GCGC 1 cut(s) 546
HinP1I GCGC 1 cut(s) 546
HincII GTYRAC 2 cut(s) 214, 1711
HindII GTYRAC 2 cut(s) 214, 1711
HindIII AAGCTT 2 cut(s) 330, 1535
HinfI GANTC 4 cut(s) 387, 973, 1247, 1933
HpaII CCGG 1 cut(s) 1548
HphI GGTGA 2 cut(s) 968, 1394
Hpy166II GTNNAC 5 cut(s) 41, 214, 457, 1639, 1711
Hpy188I TCNGA 4 cut(s) 337, 1602, 1871, 1930
Hpy188III TCNNGA 2 cut(s) 1047, 1349
Hpy8I GTNNAC 5 cut(s) 41, 214, 457, 1639, 1711
HpyAV CCTTC 6 cut(s) 245, 569, 1040, 1223, 1437, 1481
HpyCH4IV ACGT 6 cut(s) 536, 1024, 1051, 1125, 1234, 1713
HpyF10VI GCNNNNNNNGC 1 cut(s) 291
HpyF3I CTNAG 4 cut(s) 392, 1322, 1929, 1994
HpySE526I ACGT 6 cut(s) 536, 1024, 1051, 1125, 1234, 1713
HspAI GCGC 1 cut(s) 546
Ksp22I TGATCA 1 cut(s) 315
Kzo9I GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
LmnI GCTCC 1 cut(s) 967
Lsp1109I GCAGC 1 cut(s) 1296
LweI GCATC 1 cut(s) 1890
MaeI CTAG 2 cut(s) 476, 549
MaeII ACGT 6 cut(s) 536, 1024, 1051, 1125, 1234, 1713
MaeIII GTNAC 4 cut(s) 596, 689, 796, 1325
MalI GATC 6 cut(s) 233, 317, 936, 1353, 1514, 1542
MboI GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
MboII GAAGA 9 cut(s) 16, 42, 370, 411, 874, 881, 1401, 1830, 1946
MhlI GDGCHC 1 cut(s) 287
MlsI TGGCCA 1 cut(s) 705
MluNI TGGCCA 1 cut(s) 705
MlyI GAGTC 2 cut(s) 396, 1241
MmeI TCCRAC 3 cut(s) 684, 1779, 1837
Mox20I TGGCCA 1 cut(s) 705
Mph1103I ATGCAT 1 cut(s) 14
MroXI GAANNNNTTC 3 cut(s) 1470, 1556, 1740
MscI TGGCCA 1 cut(s) 705
MslI CAYNNNNRTG 4 cut(s) 718, 747, 809, 1941
Msp20I TGGCCA 1 cut(s) 705
MspA1I CMGCKG 1 cut(s) 718
MspCI CTTAAG 1 cut(s) 1681
MspI CCGG 1 cut(s) 1548
MspR9I CCNGG 2 cut(s) 524, 1549
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 1 cut(s) 524
MvnI CGCG 1 cut(s) 970
MwoI GCNNNNNNNGC 1 cut(s) 291
NciI CCSGG 1 cut(s) 1549
NcoI CCATGG 1 cut(s) 996
NdeII GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
NheI GCTAGC 1 cut(s) 548
NlaIV GGNNCC 2 cut(s) 293, 1806
NsiI ATGCAT 1 cut(s) 14
NspI RCATGY 2 cut(s) 1423, 1975
NspV TTCGAA 1 cut(s) 986
OliI CACNNNNGTG 1 cut(s) 718
PaeR7I CTCGAG 1 cut(s) 52
PciI ACATGT 1 cut(s) 1419
PcsI WCGNNNNNNNCGW 1 cut(s) 1030
PctI GAATGC 1 cut(s) 614
PdmI GAANNNNTTC 3 cut(s) 1470, 1556, 1740
PfeI GAWTC 2 cut(s) 973, 1933
PfoI TCCNGGA 1 cut(s) 1547
PkrI GCNGC 1 cut(s) 1286
PleI GAGTC 2 cut(s) 395, 1241
PpsI GAGTC 2 cut(s) 395, 1241
Ppu21I YACGTR 1 cut(s) 1235
PscI ACATGT 1 cut(s) 1419
PshBI ATTAAT 1 cut(s) 21
Psp1406I AACGTT 1 cut(s) 1125
Psp6I CCWGG 1 cut(s) 522
PspGI CCWGG 1 cut(s) 522
PspN4I GGNNCC 2 cut(s) 293, 1806
PspPI GGNCC 4 cut(s) 292, 1565, 1824, 1871
PspXI VCTCGAGB 1 cut(s) 52
RsaI GTAC 2 cut(s) 40, 438
RsaNI GTAC 2 cut(s) 39, 437
RseI CAYNNNNRTG 4 cut(s) 718, 747, 809, 1941
SatI GCNGC 1 cut(s) 1285
Sau3AI GATC 6 cut(s) 231, 315, 934, 1351, 1512, 1540
Sau96I GGNCC 4 cut(s) 292, 1565, 1824, 1871
SchI GAGTC 2 cut(s) 396, 1241
ScrFI CCNGG 2 cut(s) 524, 1549
SduI GDGCHC 1 cut(s) 287
SfaNI GCATC 1 cut(s) 1890
SfcI CTRYAG 3 cut(s) 448, 681, 1484
Sfr274I CTCGAG 1 cut(s) 52
SfuI TTCGAA 1 cut(s) 986
SinI GGWCC 3 cut(s) 1565, 1824, 1871
SlaI CTCGAG 1 cut(s) 52
SmiMI CAYNNNNRTG 4 cut(s) 718, 747, 809, 1941
SmlI CTYRAG 2 cut(s) 52, 1681
SmoI CTYRAG 2 cut(s) 52, 1681
SnaBI TACGTA 1 cut(s) 1235
SsiI CCGC 3 cut(s) 496, 718, 970
SspI AATATT 1 cut(s) 1888
SspMI CTAG 2 cut(s) 476, 549
StyD4I CCNGG 2 cut(s) 522, 1547
StyI CCWWGG 4 cut(s) 295, 996, 1647, 1880
TaiI ACGT 6 cut(s) 539, 1027, 1054, 1128, 1237, 1716
TaqI TCGA 6 cut(s) 53, 528, 986, 1033, 1092, 1150
TatI WGTACW 1 cut(s) 38
TfiI GAWTC 2 cut(s) 973, 1933
TscAI CASTG 1 cut(s) 1567
TseI GCWGC 1 cut(s) 1284
TspDTI ATGAA 9 cut(s) 17, 92, 381, 556, 892, 936, 1028, 1158, 1653
TspRI CASTG 1 cut(s) 1567
Vha464I CTTAAG 1 cut(s) 1681
VpaK11BI GGWCC 3 cut(s) 1565, 1824, 1871
VspI ATTAAT 1 cut(s) 21
XapI RAATTY 9 cut(s) 442, 772, 982, 991, 1003, 1342, 1660, 1757, 1765
XceI RCATGY 2 cut(s) 1423, 1975
XcmI CCANNNNNNNNNTGG 1 cut(s) 1815
XhoI CTCGAG 1 cut(s) 52
XmnI GAANNNNTTC 3 cut(s) 1470, 1556, 1740
XspI CTAG 2 cut(s) 476, 549
Zsp2I ATGCAT 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.