pycom06g01580
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
1693388 .. 1696846
3459 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g01580.5

Sequence Viewer

Length: 1338 bp
ATGGCGAGGCGGCAGCAGCAGCACTCAAAGCCTTGGAGACCATTCACAGCAAACTGCTGTTCAGCTGAAGACCAAACAATCTTTCGCAACTTCAGCAGGTGTAGGCCATCAAGGTCTGATCTCTCCAAGGATGTTGCTCATCAACTGCCATCCTTCCGGAGGTTGTCTTTTTCTGATCTCAGCCGTTCTTCGTCCATACGGATCAACGAGGATCTTGCACAGTCTTTTGGGTCGGACTTGTATGATTTTCAACTGAGTGAGCTGCGTGCAGTGACTCAGAATTTTTCGGTCAATTTTTTGCTTGGAGAAGGTGGGTTTGGAACCGTGCATAAGGGTTATGTTGATGAGAATTTGAGGCAGGGTTTGAAGGCTCAGGCCGTTGCCGTTAAGCTCCTCGACATTGAAGGCCTACAAGGACACCGCGAATGGCTCGCAGAAGTGATATTTCTTGGGCAGCTGAGGCACCAGAATTTGGTGAAATTGATTGGCTACTGTTGCGAGAACGAAGAAAGACTCCTTGTTTATGAGTTTATGCCTCGAGGCAGCTTAGAGAATCACTTATTCAAAAGGCTTTCTGCAGTATCATTGCCTTGGGCCACAAGACTAAAGATTGCAATAGGAGCAGCGAAAGGCCTTGCTTTCTTGCATGGAGCTGAGACACCTGTTATATACCGGGATTTCAAAACTTCAAATGTCTTGGTAGATTCTGATTTCACAGCAAAGCTGTCAGATTTTGGACTTGCAAAGATGGGGCCTGAAGGATCAGAAACGCATGTCACAACAAGAGTAATGGGTACCTATGGATACGCTGCCCCTGAATATGTCTCAACAGGACCCATTTCATTAATCAAATGCATTGACATTTGGATGAATTTCAAATTTTCAGGGCAATTGACAACAAAATGTGACATCTACAGCTTTGGAGTGGTACTGCTAGAATTGCTAACAGGAAAAAGAGCAATGGATAAATCGAGACCAAAGAGCGAGCAAAATCTGATTGATTGGGCAAAACCTTACCTGACTAGCAGTAGTCGGAGGTTGCGCTATATTATGGACCCAAGACTTGCTGGCCAGTATTCTGTCAAGGGAGCAAAGGAGATTGCCCATCTGGCATTACAATGCATAAGTATGAACCCTAAAGACAGGCCTAAAATGCCAACCATTGTCGAGACTCTTGAAAGCCTTCAAAACTTGAAGGATATGGCCGTCGCTTGTGGACATTGGCCGGCATCACCAAAATCTGCTAGAAATGGGGTTTTTGGTAAAGCTAGAATGGATGGTCACAGAGTTGGGAATATCAGGAAATCGTCTCCAACTGCAACTGCAAATCAGAAATAA

Protein Analysis

446

Amino Acids

49.88

Weight (kDa)

9.47

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016603)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61590
fragaria_vesca FvH4_5g24390
malus_domestica MD06G1021900.v1.1
prunus_persica Prupe.5G016800_v2.0.a1
pyrus_communis pycom06g01580
rosa_chinensis RchiOBHm_Chr7g0214781
rosa_laevigata RLG00000002722
rosa_multiflora Rmu_sc0021589.1_g000001
rosa_roxburghii Rroxscaffold_3G00245080
rosa_samantha Rh7AG284000 Rh7BG274600 Rh7CG303400 Rh7DG287300
rosa_wichuraiana Rw7G024210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 87
AbsI CCTCGAGG 1 cut(s) 537
Acc36I ACCTGC 1 cut(s) 87
Acc65I GGTACC 1 cut(s) 794
AccB1I GGYRCC 2 cut(s) 462, 794
AccB7I CCANNNNNTGG 1 cut(s) 472
AccII CGCG 1 cut(s) 423
AccIII TCCGGA 1 cut(s) 156
AciI CCGC 2 cut(s) 10, 421
AclWI GGATC 3 cut(s) 209, 219, 769
AcoI YGGCCR 3 cut(s) 1069, 1203, 1223
AcsI RAATTY 5 cut(s) 280, 349, 469, 871, 878
AcuI CTGAAG 3 cut(s) 76, 87, 777
AfaI GTAC 2 cut(s) 796, 930
AfiI CCNNNNNNNGG 2 cut(s) 159, 472
AjuI GAANNNNNNNTTGG 4 cut(s) 66, 98, 300, 332
AluBI AGCT 9 cut(s) 65, 262, 391, 457, 546, 653, 724, 918, 1268
AluI AGCT 9 cut(s) 65, 262, 391, 457, 546, 653, 724, 918, 1268
Alw26I GTCTC 6 cut(s) 31, 650, 829, 967, 1163, 1314
AlwI GGATC 3 cut(s) 209, 219, 769
Ama87I CYCGRG 1 cut(s) 537
Aor13HI TCCGGA 1 cut(s) 156
ApeKI GCWGC 8 cut(s) 13, 16, 19, 262, 454, 543, 623, 809
ApoI RAATTY 5 cut(s) 280, 349, 469, 871, 878
AseI ATTAAT 1 cut(s) 845
Asp700I GAANNNNTTC 1 cut(s) 1182
Asp718I GGTACC 1 cut(s) 794
AspLEI GCGC 1 cut(s) 1044
AspS9I GGNCC 4 cut(s) 594, 752, 833, 1054
AsuC2I CCSGG 1 cut(s) 674
AsuHPI GGTGA 2 cut(s) 487, 1224
AvaI CYCGRG 1 cut(s) 537
AvaII GGWCC 2 cut(s) 833, 1054
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 2 cut(s) 462, 794
BbsI GAAGAC 1 cut(s) 75
BbvCI CCTCAGC 1 cut(s) 458
BbvI GCAGC 8 cut(s) 25, 28, 31, 249, 466, 555, 635, 796
BccI CCATC 5 cut(s) 115, 157, 742, 1113, 1271
BceAI ACGGC 4 cut(s) 168, 362, 368, 1190
BcgI CGANNNNNNTGC 2 cut(s) 197, 231
BciVI GTATCC 1 cut(s) 797
BcnI CCSGG 1 cut(s) 674
BcoDI GTCTC 6 cut(s) 31, 650, 829, 967, 1163, 1314
BfaI CTAG 4 cut(s) 935, 1023, 1245, 1269
BfmI CTRYAG 2 cut(s) 576, 913
BfuAI ACCTGC 1 cut(s) 87
BfuI GTATCC 1 cut(s) 797
BglI GCCNNNNNGGC 1 cut(s) 1109
BisI GCNGC 9 cut(s) 11, 14, 17, 20, 263, 455, 544, 624, 810
BlsI GCNGC 9 cut(s) 12, 15, 18, 21, 264, 456, 545, 625, 811
Bme1390I CCNGG 1 cut(s) 674
Bme18I GGWCC 2 cut(s) 833, 1054
BmeT110I CYCGRG 1 cut(s) 537
BmgT120I GGNCC 4 cut(s) 594, 752, 833, 1054
BmiI GGNNCC 6 cut(s) 322, 464, 753, 796, 835, 1056
BmrFI CCNGG 1 cut(s) 674
BmsI GCATC 1 cut(s) 1238
BpiI GAAGAC 1 cut(s) 75
Bpu10I CCTNAGC 2 cut(s) 372, 458
BpuMI CCSGG 1 cut(s) 674
BsaI GGTCTC 2 cut(s) 31, 967
BsaJI CCNNGG 3 cut(s) 32, 126, 590
BsaWI WCCGGW 1 cut(s) 156
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 472
Bse118I RCCGGY 1 cut(s) 1225
Bse1I ACTGG 1 cut(s) 1072
Bse3DI GCAATG 2 cut(s) 584, 966
BseAI TCCGGA 1 cut(s) 156
BseDI CCNNGG 3 cut(s) 32, 126, 590
BseGI GGATG 4 cut(s) 136, 149, 873, 1282
BseLI CCNNNNNNNGG 2 cut(s) 159, 472
BseMI GCAATG 2 cut(s) 584, 966
BseMII CTCAG 6 cut(s) 193, 245, 290, 386, 449, 645
BseNI ACTGG 1 cut(s) 1072
BseRI GAGGAG 1 cut(s) 383
BseXI GCAGC 8 cut(s) 25, 28, 31, 249, 466, 555, 635, 796
BsgI GTGCAG 1 cut(s) 288
Bsh1236I CGCG 1 cut(s) 423
BshNI GGYRCC 2 cut(s) 462, 794
BsiHKCI CYCGRG 1 cut(s) 537
BsiSI CCGG 3 cut(s) 157, 673, 1226
BslI CCNNNNNNNGG 2 cut(s) 159, 472
BsmAI GTCTC 6 cut(s) 31, 650, 829, 967, 1163, 1314
BsmBI CGTCTC 1 cut(s) 1314
Bso31I GGTCTC 2 cut(s) 31, 967
BsoBI CYCGRG 1 cut(s) 537
Bsp13I TCCGGA 1 cut(s) 156
Bsp143I GATC 5 cut(s) 118, 175, 201, 211, 761
BspACI CCGC 2 cut(s) 10, 421
BspCNI CTCAG 6 cut(s) 192, 246, 289, 385, 450, 646
BspEI TCCGGA 1 cut(s) 156
BspFNI CGCG 1 cut(s) 423
BspLI GGNNCC 6 cut(s) 322, 464, 753, 796, 835, 1056
BspMAI CTGCAG 1 cut(s) 580
BspMI ACCTGC 1 cut(s) 87
BspPI GGATC 3 cut(s) 209, 219, 769
BspT107I GGYRCC 2 cut(s) 462, 794
BspTNI GGTCTC 2 cut(s) 31, 967
BsrDI GCAATG 2 cut(s) 584, 966
BsrFI RCCGGY 1 cut(s) 1225
BsrI ACTGG 1 cut(s) 1072
BssAI RCCGGY 1 cut(s) 1225
BssECI CCNNGG 3 cut(s) 32, 126, 590
BssMI GATC 5 cut(s) 118, 175, 201, 211, 761
BssT1I CCWWGG 3 cut(s) 32, 126, 590
Bst4CI ACNGT 3 cut(s) 222, 325, 494
BstC8I GCNNGC 5 cut(s) 267, 432, 986, 1069, 1227
BstDEI CTNAG 7 cut(s) 179, 254, 276, 372, 458, 547, 654
BstENI CCTNNNNNAGG 1 cut(s) 157
BstF5I GGATG 4 cut(s) 136, 149, 873, 1282
BstFNI CGCG 1 cut(s) 423
BstHHI GCGC 1 cut(s) 1044
BstKTI GATC 5 cut(s) 121, 178, 204, 214, 764
BstMAI GTCTC 6 cut(s) 31, 650, 829, 967, 1163, 1314
BstMBI GATC 5 cut(s) 118, 175, 201, 211, 761
BstNSI RCATGY 1 cut(s) 776
BstSCI CCNGG 1 cut(s) 672
BstSFI CTRYAG 2 cut(s) 576, 913
BstUI CGCG 1 cut(s) 423
BstV1I GCAGC 8 cut(s) 25, 28, 31, 249, 466, 555, 635, 796
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BsuI GTATCC 1 cut(s) 797
BtsCI GGATG 4 cut(s) 136, 149, 873, 1282
BtsI GCAGTG 1 cut(s) 276
BtsIMutI CAGTG 1 cut(s) 276
BveI ACCTGC 1 cut(s) 87
Cac8I GCNNGC 5 cut(s) 267, 432, 986, 1069, 1227
CfoI GCGC 1 cut(s) 1044
Cfr10I RCCGGY 1 cut(s) 1225
Cfr13I GGNCC 4 cut(s) 594, 752, 833, 1054
Csp6I GTAC 2 cut(s) 795, 929
CviAII CATG 2 cut(s) 647, 773
CviQI GTAC 2 cut(s) 795, 929
DdeI CTNAG 7 cut(s) 179, 254, 276, 372, 458, 547, 654
DpnI GATC 5 cut(s) 120, 177, 203, 213, 763
DpnII GATC 5 cut(s) 118, 175, 201, 211, 761
EaeI YGGCCR 3 cut(s) 1069, 1203, 1223
Eco130I CCWWGG 3 cut(s) 32, 126, 590
Eco147I AGGCCT 3 cut(s) 408, 633, 1147
Eco31I GGTCTC 2 cut(s) 31, 967
Eco47I GGWCC 2 cut(s) 833, 1054
Eco57I CTGAAG 3 cut(s) 76, 87, 777
Eco88I CYCGRG 1 cut(s) 537
EcoNI CCTNNNNNAGG 1 cut(s) 157
EcoO109I RGGNCCY 2 cut(s) 752, 833
EcoT14I CCWWGG 3 cut(s) 32, 126, 590
EcoT22I ATGCAT 2 cut(s) 857, 1124
ErhI CCWWGG 3 cut(s) 32, 126, 590
Esp3I CGTCTC 1 cut(s) 1314
FaeI CATG 2 cut(s) 650, 776
FatI CATG 2 cut(s) 646, 772
Fnu4HI GCNGC 9 cut(s) 11, 14, 17, 20, 263, 455, 544, 624, 810
FokI GGATG 4 cut(s) 136, 143, 880, 1289
Fsp4HI GCNGC 9 cut(s) 11, 14, 17, 20, 263, 455, 544, 624, 810
FspBI CTAG 4 cut(s) 935, 1023, 1245, 1269
GlaI GCGC 1 cut(s) 1043
GluI GCNGC 9 cut(s) 11, 14, 17, 20, 263, 455, 544, 624, 810
HapII CCGG 3 cut(s) 157, 673, 1226
HhaI GCGC 1 cut(s) 1044
Hin1II CATG 2 cut(s) 650, 776
Hin6I GCGC 1 cut(s) 1042
HinP1I GCGC 1 cut(s) 1042
HinfI GANTC 5 cut(s) 274, 513, 553, 704, 1171
HpaII CCGG 3 cut(s) 157, 673, 1226
HphI GGTGA 2 cut(s) 487, 1224
Hpy166II GTNNAC 1 cut(s) 1217
Hpy188III TCNNGA 5 cut(s) 157, 972, 1168, 1175, 1300
Hpy8I GTNNAC 1 cut(s) 1217
Hpy99I CGWCG 1 cut(s) 1211
HpyAV CCTTC 7 cut(s) 163, 302, 361, 398, 752, 1189, 1193
HpyCH4III ACNGT 3 cut(s) 222, 325, 494
HpyF3I CTNAG 7 cut(s) 179, 254, 276, 372, 458, 547, 654
Hsp92II CATG 2 cut(s) 650, 776
HspAI GCGC 1 cut(s) 1042
Kpn2I TCCGGA 1 cut(s) 156
KpnI GGTACC 1 cut(s) 798
KroI GCCGGC 1 cut(s) 1225
KroNI GCCGGC 1 cut(s) 1227
Kzo9I GATC 5 cut(s) 118, 175, 201, 211, 761
LmnI GCTCC 4 cut(s) 396, 620, 650, 1088
Lsp1109I GCAGC 8 cut(s) 25, 28, 31, 249, 466, 555, 635, 796
LweI GCATC 1 cut(s) 1238
MaeI CTAG 4 cut(s) 935, 1023, 1245, 1269
MaeIII GTNAC 4 cut(s) 271, 775, 905, 1280
MalI GATC 5 cut(s) 120, 177, 203, 213, 763
MboI GATC 5 cut(s) 118, 175, 201, 211, 761
MboII GAAGA 3 cut(s) 80, 180, 518
MfeI CAATTG 1 cut(s) 890
MflI RGATCY 1 cut(s) 211
MlsI TGGCCA 1 cut(s) 1071
MluCI AATT 9 cut(s) 280, 292, 349, 469, 479, 871, 878, 890, 938
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 3 cut(s) 268, 507, 1165
MmeI TCCRAC 3 cut(s) 213, 1013, 1337
MnlI CCTC 8 cut(s) 153, 202, 348, 404, 453, 533, 546, 1029
Mox20I TGGCCA 1 cut(s) 1071
Mph1103I ATGCAT 2 cut(s) 857, 1124
MroI TCCGGA 1 cut(s) 156
MroNI GCCGGC 1 cut(s) 1225
MroXI GAANNNNTTC 1 cut(s) 1182
MscI TGGCCA 1 cut(s) 1071
MseI TTAA 2 cut(s) 387, 845
MslI CAYNNNNRTG 3 cut(s) 866, 1117, 1127
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 2 cut(s) 65, 457
MspI CCGG 3 cut(s) 157, 673, 1226
MspR9I CCNGG 1 cut(s) 674
MunI CAATTG 1 cut(s) 890
MvnI CGCG 1 cut(s) 423
NaeI GCCGGC 1 cut(s) 1227
NciI CCSGG 1 cut(s) 674
NdeII GATC 5 cut(s) 118, 175, 201, 211, 761
NgoMIV GCCGGC 1 cut(s) 1225
NlaIII CATG 2 cut(s) 650, 776
NlaIV GGNNCC 6 cut(s) 322, 464, 753, 796, 835, 1056
NmuCI GTSAC 4 cut(s) 271, 775, 905, 1280
NsiI ATGCAT 2 cut(s) 857, 1124
NspI RCATGY 1 cut(s) 776
PaeR7I CTCGAG 1 cut(s) 537
PaqCI CACCTGC 1 cut(s) 87
PceI AGGCCT 3 cut(s) 408, 633, 1147
PdiI GCCGGC 1 cut(s) 1227
PdmI GAANNNNTTC 1 cut(s) 1182
PfeI GAWTC 2 cut(s) 553, 704
PflMI CCANNNNNTGG 1 cut(s) 472
PkrI GCNGC 9 cut(s) 12, 15, 18, 21, 264, 456, 545, 625, 811
PleI GAGTC 3 cut(s) 268, 507, 1165
PpsI GAGTC 3 cut(s) 268, 507, 1165
PpuMI RGGWCCY 1 cut(s) 833
PshBI ATTAAT 1 cut(s) 845
Psp5II RGGWCCY 1 cut(s) 833
PspN4I GGNNCC 6 cut(s) 322, 464, 753, 796, 835, 1056
PspPI GGNCC 4 cut(s) 594, 752, 833, 1054
PspPPI RGGWCCY 1 cut(s) 833
PspXI VCTCGAGB 1 cut(s) 537
PstI CTGCAG 1 cut(s) 580
PsuI RGATCY 1 cut(s) 211
PvuII CAGCTG 2 cut(s) 65, 457
RsaI GTAC 2 cut(s) 796, 930
RsaNI GTAC 2 cut(s) 795, 929
RseI CAYNNNNRTG 3 cut(s) 866, 1117, 1127
SaqAI TTAA 2 cut(s) 387, 845
SatI GCNGC 9 cut(s) 11, 14, 17, 20, 263, 455, 544, 624, 810
Sau3AI GATC 5 cut(s) 118, 175, 201, 211, 761
Sau96I GGNCC 4 cut(s) 594, 752, 833, 1054
SchI GAGTC 3 cut(s) 268, 507, 1165
ScrFI CCNGG 1 cut(s) 674
SfaNI GCATC 1 cut(s) 1238
SfcI CTRYAG 2 cut(s) 576, 913
Sfr274I CTCGAG 1 cut(s) 537
SinI GGWCC 2 cut(s) 833, 1054
SlaI CTCGAG 1 cut(s) 537
SmiMI CAYNNNNRTG 3 cut(s) 866, 1117, 1127
SmlI CTYRAG 1 cut(s) 537
SmoI CTYRAG 1 cut(s) 537
Sse9I AATT 9 cut(s) 280, 292, 349, 469, 479, 871, 878, 890, 938
SseBI AGGCCT 3 cut(s) 408, 633, 1147
SsiI CCGC 2 cut(s) 10, 421
SspMI CTAG 4 cut(s) 935, 1023, 1245, 1269
StuI AGGCCT 3 cut(s) 408, 633, 1147
StyD4I CCNGG 1 cut(s) 672
StyI CCWWGG 3 cut(s) 32, 126, 590
TaaI ACNGT 3 cut(s) 222, 325, 494
TaqI TCGA 4 cut(s) 396, 538, 971, 1167
TaqII GACCGA 1 cut(s) 277
TasI AATT 9 cut(s) 280, 292, 349, 469, 479, 871, 878, 890, 938
TauI GCSGC 1 cut(s) 13
TfiI GAWTC 2 cut(s) 553, 704
Tru1I TTAA 2 cut(s) 387, 845
Tru9I TTAA 2 cut(s) 387, 845
TscAI CASTG 1 cut(s) 276
TseFI GTSAC 4 cut(s) 271, 775, 905, 1280
TseI GCWGC 8 cut(s) 13, 16, 19, 262, 454, 543, 623, 809
Tsp45I GTSAC 4 cut(s) 271, 775, 905, 1280
TspDTI ATGAA 3 cut(s) 831, 884, 1145
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 1 cut(s) 276
Van91I CCANNNNNTGG 1 cut(s) 472
VpaK11BI GGWCC 2 cut(s) 833, 1054
VspI ATTAAT 1 cut(s) 845
XagI CCTNNNNNAGG 1 cut(s) 157
XapI RAATTY 5 cut(s) 280, 349, 469, 871, 878
XceI RCATGY 1 cut(s) 776
XhoI CTCGAG 1 cut(s) 537
XmnI GAANNNNTTC 1 cut(s) 1182
XspI CTAG 4 cut(s) 935, 1023, 1245, 1269
Zsp2I ATGCAT 2 cut(s) 857, 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.