Rw7G024210
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
29678158 .. 29680600
2443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G024210.1

Sequence Viewer

Length: 1281 bp
ATGAGGCCACAGCCCTCATCAAAGCCATGGAGACCATTCACAGCGAAGTATTGCTGCTCGGCAGAAGACCAGACATTCTTTGGCAATTTCAGCAGGCCCTGCAGGCCTTCGAGATCAGATTTATCAAGGGATGGTCCTCAGCTACCCTCGTTCCGGCGACTGTCTTTCTCTGATCTCAGTCGTTCTTCCTCGACGCGTATCATGGATGATCTTGCACAGTCTTTCGGGTCTGAGTTGCATGATTTTCAGCTGAGCGAGCTGCGTGGTATAACTCATGATTTCTCGAGTAACTTTTTGTTGGGGGAAGGTGGGTTTGGAACTGTGCATAAGGGCTATATAGATGAGAACTTGAGGCAAGGTTTGAAGCCACAGGCTGTTGCTGTTAAGCTCCTGGACATTGAAGGCTTGCAGGGACACCGCGAATGGCTCGCAGAAGTGATATTTCTTGGGCAGCTGAGGCACCCACATTTGGTCAAATTAATTGGCTATTGTTGTGAGGATGAAGAAAGACTTCTGGTGTATGAGTTTATGTCCAGAGGCAGCTTGGAGAATCACTTATTCAAAAGGCTTTCAATATCATTGCCATGGGGTACAAGAATAAAGATCGCAACAGGAGCAGCCAAAGGCCTTGCTTTCTTGCATGATGCCGAGAAGCCAGTCATTTATCGGGATTTCAAAACTTCAAATGTCTTGCTAGATTCTGATTTTACGGCAAAACTGTCGGATTTCGGACTTGCAAAGATGGGACCTGAAGGATCAGAAACACATGTTACAACAAGAGTAATGGGTACATATGGCTATGCTGCCCCAGAATACGTCTCTACAGGGCAATTGACAACAAAATGTGACATATACAGCTTTGGGGTGGTGCTACTAGAATTGCTTACTGGAAGAAGAGCCATGGACAAATCAAGACCAAAGAGTGAGCAGAATCTCATTGATTGGGCAAAACCTTACCTCACTAGTACTAGAAGGTTACGCTACATTATGGACCCCAGGCTTGCCGGACAGTATTCTGTGAAGGGTGCGAAGGAGATTGCCCTTCTGGCATTACAATGCATAAGTTTGAGCCCTAAAGACAGGCCAAGGATGCCAGCTATTGTTGAAACCCTAGAAGCCGTGCAACTTTTGAAGGACATGGCTGTGACACATGGGCATTGGCCGGCGTCGCCCAAATCCAGTAGAAATGGGGTTTTTGGTGCTAAAGCTAGAGTTGATGGAAATAAAGTTGCGTATATCAGGAAATCCTCTGCAGCTACAACAGTAACTCAGAAATCTTGA

Protein Analysis

426

Amino Acids

47.61

Weight (kDa)

9.35

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 99 - 369 2.2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 100 - 371 8.4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016603)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61590
fragaria_vesca FvH4_5g24390
malus_domestica MD06G1021900.v1.1
prunus_persica Prupe.5G016800_v2.0.a1
pyrus_communis pycom06g01580
rosa_chinensis RchiOBHm_Chr7g0214781
rosa_laevigata RLG00000002722
rosa_multiflora Rmu_sc0021589.1_g000001
rosa_roxburghii Rroxscaffold_3G00245080
rosa_samantha Rh7AG284000 Rh7BG274600 Rh7CG303400 Rh7DG287300
rosa_wichuraiana Rw7G024210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 459
AccII CGCG 2 cut(s) 196, 420
AciI CCGC 1 cut(s) 418
AclWI GGATC 1 cut(s) 763
AcoI YGGCCR 1 cut(s) 1160
AcuI CTGAAG 1 cut(s) 771
AcyI GRCGYC 1 cut(s) 1166
AfaI GTAC 3 cut(s) 592, 790, 967
AfiI CCNNNNNNNGG 2 cut(s) 153, 469
AflIII ACRYGT 2 cut(s) 194, 766
AgsI TTSAA 8 cut(s) 364, 401, 562, 573, 676, 684, 1106, 1132
AhlI ACTAGT 1 cut(s) 962
AjnI CCWGG 2 cut(s) 390, 995
AjuI GAANNNNNNNTTGG 2 cut(s) 297, 329
Alw26I GTCTC 2 cut(s) 25, 823
AlwI GGATC 1 cut(s) 763
AlwNI CAGNNNCTG 1 cut(s) 99
Ama87I CYCGRG 1 cut(s) 283
AoxI GGCC 6 cut(s) 5, 95, 104, 625, 1082, 1160
ApeKI GCWGC 7 cut(s) 54, 259, 451, 540, 617, 803, 1253
AseI ATTAAT 1 cut(s) 479
Asp700I GAANNNNTTC 1 cut(s) 510
AspS9I GGNCC 4 cut(s) 96, 134, 746, 991
AvaI CYCGRG 1 cut(s) 283
AvaII GGWCC 3 cut(s) 134, 746, 991
BanI GGYRCC 1 cut(s) 459
BanII GRGCYC 1 cut(s) 1073
BbsI GAAGAC 1 cut(s) 72
BbvCI CCTCAGC 2 cut(s) 138, 455
BbvI GCAGC 7 cut(s) 41, 246, 463, 552, 629, 790, 1265
BccI CCATC 3 cut(s) 125, 736, 1211
BceAI ACGGC 2 cut(s) 726, 1103
BcgI CGANNNNNNTGC 2 cut(s) 702, 736
BciT130I CCWGG 2 cut(s) 392, 997
BcoDI GTCTC 2 cut(s) 25, 823
BcuI ACTAGT 1 cut(s) 962
BfaI CTAG 6 cut(s) 695, 875, 963, 969, 1112, 1209
BfmI CTRYAG 3 cut(s) 100, 822, 1251
BglI GCCNNNNNGGC 2 cut(s) 103, 1046
BisI GCNGC 7 cut(s) 55, 260, 452, 541, 618, 804, 1254
BlpI GCTNAGC 1 cut(s) 251
BlsI GCNGC 7 cut(s) 56, 261, 453, 542, 619, 805, 1255
BmcAI AGTACT 1 cut(s) 967
Bme1390I CCNGG 2 cut(s) 392, 997
Bme18I GGWCC 3 cut(s) 134, 746, 991
BmeT110I CYCGRG 1 cut(s) 283
BmgT120I GGNCC 4 cut(s) 96, 134, 746, 991
BmiI GGNNCC 3 cut(s) 461, 747, 993
BmrFI CCNGG 2 cut(s) 392, 997
BmsI GCATC 2 cut(s) 634, 1080
BpiI GAAGAC 1 cut(s) 72
Bpu10I CCTNAGC 2 cut(s) 138, 455
Bpu1102I GCTNAGC 1 cut(s) 251
BpuEI CTTGAG 1 cut(s) 370
BsaHI GRCGYC 1 cut(s) 1166
BsaI GGTCTC 1 cut(s) 25
BsaJI CCNNGG 5 cut(s) 26, 584, 900, 995, 1085
Bsc4I CCNNNNNNNGG 2 cut(s) 153, 469
Bse118I RCCGGY 1 cut(s) 1162
Bse1I ACTGG 3 cut(s) 656, 892, 1179
Bse3DI GCAATG 1 cut(s) 578
BseBI CCWGG 2 cut(s) 392, 997
BseDI CCNNGG 5 cut(s) 26, 584, 900, 995, 1085
BseGI GGATG 4 cut(s) 136, 211, 505, 1095
BseLI CCNNNNNNNGG 2 cut(s) 153, 469
BseMI GCAATG 1 cut(s) 578
BseMII CTCAG 5 cut(s) 152, 190, 222, 242, 446
BseNI ACTGG 3 cut(s) 656, 892, 1179
BseXI GCAGC 7 cut(s) 41, 246, 463, 552, 629, 790, 1265
Bsh1236I CGCG 2 cut(s) 196, 420
BshFI GGCC 6 cut(s) 7, 97, 106, 627, 1084, 1162
BshNI GGYRCC 1 cut(s) 459
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 3 cut(s) 154, 1005, 1163
BslFI GGGAC 2 cut(s) 426, 759
BslI CCNNNNNNNGG 2 cut(s) 153, 469
BsmAI GTCTC 2 cut(s) 25, 823
BsmBI CGTCTC 1 cut(s) 823
BsmFI GGGAC 2 cut(s) 426, 759
BsnI GGCC 6 cut(s) 7, 97, 106, 627, 1084, 1162
Bso31I GGTCTC 1 cut(s) 25
BsoBI CYCGRG 1 cut(s) 283
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp143I GATC 5 cut(s) 113, 172, 208, 603, 755
Bsp1720I GCTNAGC 1 cut(s) 251
Bsp19I CCATGG 3 cut(s) 26, 584, 900
BspACI CCGC 1 cut(s) 418
BspANI GGCC 6 cut(s) 7, 97, 106, 627, 1084, 1162
BspCNI CTCAG 5 cut(s) 151, 189, 223, 243, 447
BspFNI CGCG 2 cut(s) 196, 420
BspHI TCATGA 1 cut(s) 274
BspLI GGNNCC 3 cut(s) 461, 747, 993
BspMAI CTGCAG 2 cut(s) 104, 1255
BspPI GGATC 1 cut(s) 763
BspQI GCTCTTC 1 cut(s) 889
BspT107I GGYRCC 1 cut(s) 459
BspTNI GGTCTC 1 cut(s) 25
BsrDI GCAATG 1 cut(s) 578
BsrFI RCCGGY 1 cut(s) 1162
BsrI ACTGG 3 cut(s) 656, 892, 1179
BssAI RCCGGY 1 cut(s) 1162
BssECI CCNNGG 5 cut(s) 26, 584, 900, 995, 1085
BssMI GATC 5 cut(s) 113, 172, 208, 603, 755
BssNI GRCGYC 1 cut(s) 1166
BssT1I CCWWGG 4 cut(s) 26, 584, 900, 1085
Bst2UI CCWGG 2 cut(s) 392, 997
Bst4CI ACNGT 6 cut(s) 162, 219, 322, 720, 1011, 1264
Bst6I CTCTTC 1 cut(s) 889
BstACI GRCGYC 1 cut(s) 1166
BstAPI GCANNNNNTGC 1 cut(s) 99
BstC8I GCNNGC 8 cut(s) 95, 104, 257, 407, 429, 1002, 1095, 1164
BstDEI CTNAG 6 cut(s) 138, 176, 231, 251, 455, 1269
BstDSI CCRYGG 3 cut(s) 26, 584, 900
BstF5I GGATG 4 cut(s) 136, 211, 505, 1095
BstFNI CGCG 2 cut(s) 196, 420
BstKTI GATC 5 cut(s) 116, 175, 211, 606, 758
BstMAI GTCTC 2 cut(s) 25, 823
BstMBI GATC 5 cut(s) 113, 172, 208, 603, 755
BstMWI GCNNNNNNNGC 9 cut(s) 90, 99, 103, 256, 457, 614, 1046, 1090, 1168
BstNI CCWGG 2 cut(s) 392, 997
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 2 cut(s) 390, 995
BstSFI CTRYAG 3 cut(s) 100, 822, 1251
BstUI CGCG 2 cut(s) 196, 420
BstV1I GCAGC 7 cut(s) 41, 246, 463, 552, 629, 790, 1265
BstV2I GAAGAC 1 cut(s) 72
BsuRI GGCC 6 cut(s) 7, 97, 106, 627, 1084, 1162
BtgI CCRYGG 3 cut(s) 26, 584, 900
BtsCI GGATG 4 cut(s) 136, 211, 505, 1095
Cac8I GCNNGC 8 cut(s) 95, 104, 257, 407, 429, 1002, 1095, 1164
CaiI CAGNNNCTG 1 cut(s) 99
CciI TCATGA 1 cut(s) 274
Cfr10I RCCGGY 1 cut(s) 1162
Cfr13I GGNCC 4 cut(s) 96, 134, 746, 991
CseI GACGC 2 cut(s) 202, 1155
Csp6I GTAC 3 cut(s) 591, 789, 966
CviQI GTAC 3 cut(s) 591, 789, 966
DdeI CTNAG 6 cut(s) 138, 176, 231, 251, 455, 1269
DpnI GATC 5 cut(s) 115, 174, 210, 605, 757
DpnII GATC 5 cut(s) 113, 172, 208, 603, 755
EaeI YGGCCR 1 cut(s) 1160
Eam1104I CTCTTC 1 cut(s) 889
EarI CTCTTC 1 cut(s) 889
Eco130I CCWWGG 4 cut(s) 26, 584, 900, 1085
Eco147I AGGCCT 2 cut(s) 106, 627
Eco24I GRGCYC 1 cut(s) 1073
Eco31I GGTCTC 1 cut(s) 25
Eco47I GGWCC 3 cut(s) 134, 746, 991
Eco57I CTGAAG 1 cut(s) 771
Eco88I CYCGRG 1 cut(s) 283
EcoO109I RGGNCCY 2 cut(s) 96, 746
EcoRII CCWGG 2 cut(s) 390, 995
EcoT14I CCWWGG 4 cut(s) 26, 584, 900, 1085
EcoT22I ATGCAT 1 cut(s) 1061
EcoT38I GRGCYC 1 cut(s) 1073
ErhI CCWWGG 4 cut(s) 26, 584, 900, 1085
Esp3I CGTCTC 1 cut(s) 823
FalI AAGNNNNNCTT 2 cut(s) 495, 527
FaqI GGGAC 2 cut(s) 426, 759
FauNDI CATATG 1 cut(s) 793
Fnu4HI GCNGC 7 cut(s) 55, 260, 452, 541, 618, 804, 1254
FokI GGATG 4 cut(s) 143, 218, 512, 1102
FriOI GRGCYC 1 cut(s) 1073
Fsp4HI GCNGC 7 cut(s) 55, 260, 452, 541, 618, 804, 1254
FspBI CTAG 6 cut(s) 695, 875, 963, 969, 1112, 1209
GluI GCNGC 7 cut(s) 55, 260, 452, 541, 618, 804, 1254
HaeIII GGCC 6 cut(s) 7, 97, 106, 627, 1084, 1162
HapII CCGG 3 cut(s) 154, 1005, 1163
HgaI GACGC 2 cut(s) 202, 1155
Hin1I GRCGYC 1 cut(s) 1166
HinfI GANTC 3 cut(s) 550, 698, 931
HpaII CCGG 3 cut(s) 154, 1005, 1163
Hpy188I TCNGA 8 cut(s) 118, 172, 232, 703, 724, 731, 760, 1272
Hpy188III TCNNGA 8 cut(s) 111, 275, 283, 534, 668, 912, 1240, 1278
Hpy99I CGWCG 2 cut(s) 196, 1171
HpyAV CCTTC 9 cut(s) 117, 299, 395, 746, 966, 1015, 1024, 1052, 1126
HpyCH4III ACNGT 6 cut(s) 162, 219, 322, 720, 1011, 1264
HpyCH4IV ACGT 1 cut(s) 816
HpyF10VI GCNNNNNNNGC 9 cut(s) 90, 99, 103, 256, 457, 614, 1046, 1090, 1168
HpyF3I CTNAG 6 cut(s) 138, 176, 231, 251, 455, 1269
HpySE526I ACGT 1 cut(s) 816
Hsp92I GRCGYC 1 cut(s) 1166
KroI GCCGGC 1 cut(s) 1162
KroNI GCCGGC 1 cut(s) 1164
Kzo9I GATC 5 cut(s) 113, 172, 208, 603, 755
LguI GCTCTTC 1 cut(s) 889
LmnI GCTCC 2 cut(s) 393, 614
Lsp1109I GCAGC 7 cut(s) 41, 246, 463, 552, 629, 790, 1265
LweI GCATC 2 cut(s) 634, 1080
MaeI CTAG 6 cut(s) 695, 875, 963, 969, 1112, 1209
MaeII ACGT 1 cut(s) 816
MaeIII GTNAC 6 cut(s) 287, 769, 845, 975, 1144, 1264
MalI GATC 5 cut(s) 115, 174, 210, 605, 757
MboI GATC 5 cut(s) 113, 172, 208, 603, 755
MboII GAAGA 5 cut(s) 77, 177, 515, 903, 906
MfeI CAATTG 1 cut(s) 830
MhlI GDGCHC 1 cut(s) 1073
MluCI AATT 5 cut(s) 85, 476, 480, 830, 878
MluI ACGCGT 1 cut(s) 194
MmeI TCCRAC 1 cut(s) 702
Mph1103I ATGCAT 1 cut(s) 1061
MroNI GCCGGC 1 cut(s) 1162
MroXI GAANNNNTTC 1 cut(s) 510
MseI TTAA 2 cut(s) 384, 479
MslI CAYNNNNRTG 3 cut(s) 583, 1054, 1142
MspA1I CMGCKG 2 cut(s) 250, 454
MspI CCGG 3 cut(s) 154, 1005, 1163
MspR9I CCNGG 2 cut(s) 392, 997
MunI CAATTG 1 cut(s) 830
MvaI CCWGG 2 cut(s) 392, 997
MvnI CGCG 2 cut(s) 196, 420
MwoI GCNNNNNNNGC 9 cut(s) 90, 99, 103, 256, 457, 614, 1046, 1090, 1168
NaeI GCCGGC 1 cut(s) 1164
NcoI CCATGG 3 cut(s) 26, 584, 900
NdeI CATATG 1 cut(s) 793
NdeII GATC 5 cut(s) 113, 172, 208, 603, 755
NgoMIV GCCGGC 1 cut(s) 1162
NlaIV GGNNCC 3 cut(s) 461, 747, 993
NmeAIII GCCGAG 2 cut(s) 38, 673
NmuCI GTSAC 2 cut(s) 845, 1144
NsiI ATGCAT 1 cut(s) 1061
NspI RCATGY 1 cut(s) 770
PaeR7I CTCGAG 1 cut(s) 283
PagI TCATGA 1 cut(s) 274
PceI AGGCCT 2 cut(s) 106, 627
PciI ACATGT 1 cut(s) 766
PciSI GCTCTTC 1 cut(s) 889
PdiI GCCGGC 1 cut(s) 1164
PdmI GAANNNNTTC 1 cut(s) 510
PfeI GAWTC 3 cut(s) 550, 698, 931
PfoI TCCNGGA 1 cut(s) 390
PkrI GCNGC 7 cut(s) 56, 261, 453, 542, 619, 805, 1255
PpuMI RGGWCCY 1 cut(s) 746
PscI ACATGT 1 cut(s) 766
PshBI ATTAAT 1 cut(s) 479
Psp5II RGGWCCY 1 cut(s) 746
Psp6I CCWGG 2 cut(s) 390, 995
PspGI CCWGG 2 cut(s) 390, 995
PspN4I GGNNCC 3 cut(s) 461, 747, 993
PspPI GGNCC 4 cut(s) 96, 134, 746, 991
PspPPI RGGWCCY 1 cut(s) 746
PstI CTGCAG 2 cut(s) 104, 1255
PstNI CAGNNNCTG 1 cut(s) 99
PvuII CAGCTG 2 cut(s) 250, 454
RsaI GTAC 3 cut(s) 592, 790, 967
RsaNI GTAC 3 cut(s) 591, 789, 966
RseI CAYNNNNRTG 3 cut(s) 583, 1054, 1142
SapI GCTCTTC 1 cut(s) 889
SaqAI TTAA 2 cut(s) 384, 479
SatI GCNGC 7 cut(s) 55, 260, 452, 541, 618, 804, 1254
Sau3AI GATC 5 cut(s) 113, 172, 208, 603, 755
Sau96I GGNCC 4 cut(s) 96, 134, 746, 991
SbfI CCTGCAGG 1 cut(s) 104
ScaI AGTACT 1 cut(s) 967
ScrFI CCNGG 2 cut(s) 392, 997
SdaI CCTGCAGG 1 cut(s) 104
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 2 cut(s) 634, 1080
SfcI CTRYAG 3 cut(s) 100, 822, 1251
SfiI GGCCNNNNNGGCC 1 cut(s) 103
Sfr274I CTCGAG 1 cut(s) 283
SinI GGWCC 3 cut(s) 134, 746, 991
SlaI CTCGAG 1 cut(s) 283
SmiMI CAYNNNNRTG 3 cut(s) 583, 1054, 1142
SmlI CTYRAG 2 cut(s) 283, 349
SmoI CTYRAG 2 cut(s) 283, 349
SpeI ACTAGT 1 cut(s) 962
Sse8387I CCTGCAGG 1 cut(s) 104
Sse9I AATT 5 cut(s) 85, 476, 480, 830, 878
SseBI AGGCCT 2 cut(s) 106, 627
SsiI CCGC 1 cut(s) 418
SspMI CTAG 6 cut(s) 695, 875, 963, 969, 1112, 1209
StuI AGGCCT 2 cut(s) 106, 627
StyD4I CCNGG 2 cut(s) 390, 995
StyI CCWWGG 4 cut(s) 26, 584, 900, 1085
TaaI ACNGT 6 cut(s) 162, 219, 322, 720, 1011, 1264
TaiI ACGT 1 cut(s) 819
TaqI TCGA 3 cut(s) 110, 191, 284
TasI AATT 5 cut(s) 85, 476, 480, 830, 878
TatI WGTACW 1 cut(s) 965
TfiI GAWTC 3 cut(s) 550, 698, 931
Tru1I TTAA 2 cut(s) 384, 479
Tru9I TTAA 2 cut(s) 384, 479
TseFI GTSAC 2 cut(s) 845, 1144
TseI GCWGC 7 cut(s) 54, 259, 451, 540, 617, 803, 1253
Tsp45I GTSAC 2 cut(s) 845, 1144
TspDTI ATGAA 1 cut(s) 516
VpaK11BI GGWCC 3 cut(s) 134, 746, 991
VspI ATTAAT 1 cut(s) 479
XceI RCATGY 1 cut(s) 770
XcmI CCANNNNNNNNNTGG 2 cut(s) 77, 541
XhoI CTCGAG 1 cut(s) 283
XmnI GAANNNNTTC 1 cut(s) 510
XspI CTAG 6 cut(s) 695, 875, 963, 969, 1112, 1209
ZrmI AGTACT 1 cut(s) 967
Zsp2I ATGCAT 1 cut(s) 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.