pycom06g16200

Microtubule-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0010759
Physical Location & Seq
Forward (+)
20575758 .. 20578114
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1887 bp
ATGCCTCCCGCCCAGAACCTCAAGCACCGGGTCTTCACCTGCCTGAATAAGCTCTCCGACCGTGACACTCATTCCCTCGCAGCTTCCGAGCTCCAATCCATCGCCCGGACCCTCGAACCGACATCCGTACCCGTTTTTCTTTCTTGCATCCAGTCCACCGACGCCTCCGACAAGTCTCCGGTACGCCGACAATGCGTCCATCTCATCACCGTCCTCTCTGAAACTCACGGCGACTCGCTGTCCCCGTACCTCTCCAAAATGCTCACCAGCATCACCAAGCGGCTCCGCGACCCGGACTCCGCCGTCCGATCCACCTGCCAAAACGCCGTCGCTTCCCTCTCCTGCCACGTCACCAAGCCCTCTTCTTTCGCCTCGTTTCTGAAGCCGCTAACCGACGCGCTTTTCACGGAGCAGGACCCGAACTCGCAGATCGGGTCGGCCCTCTGCCTGGCGTCGGGCATCGACGCCGCGCCCGACCCGGAACCCACGAAGCTGGCGAGGCTGCTACCGAGGCTCGAGAAGCTGATAAAGTGCGACGGATATAAGGCGAAGCCGGCGCTGCTGACGTTGATCGGGTCGGTGATCGCGTCGGGTGGGGCGTCGGGTCACGGAGCTTTGAGGAGCTTGGTTCCTTGCCTCGTCGGGTTCCTGAGCAGCGAGGACTGGGCCGCGAGGAAGGCCGCGGCGGAAGCGCTTGCCAAGCTGGCGGTTGTGGAGAGAGACACGTTGTCGGAGTTCAAAGCTGGGTCCTTGAGAACGTTTGAGAATCGGAAGTTTGATAGGGTGAAGAGTGTTAGGGAGGTTATGAATCAGATGATGGAGGCTTGGAAGAAGATTCCCGATCTCTCCGACGAGGCTTCCCCACCGCCGCGATCAAATGCTTCCTCCAAAGGTTCTTTGATGGATCCAGAGAATGCAAGTGATGGTGATGGACGCCATCCGGTTAGGTCTAGAAACAGCGATGCTCCTGGTTCCGGAGCTACTCAATTGAAGAAGAAAGCCACCTCGGCTAGTAGATCAACTCCGCCTGAGAGTTCTTATGCTACCACTGCTACGAAGACAAGTACTTTGAAGAGTAAGGACAAGAAGGCGAATCCAGGGACGTTAGGGAAACCAGACCGTAAGAAGCCTTCAGATTGGGAAGCTGAGATTAGTGCGGTTGGCGCTCCCTCATCGGCTGGGGCCTTTGATGACGGTTTTAAGGAGATGGATGAGAATATCCCAGAAAGAAGGATCAATGGGAACACAAAACGTACCTTGTTCCGAAGGAGTTCTGATAACAAAGTGCACAAATTTGGTGGGTCAAGGTCAGGATCTCGTGTGGCTCCGTATCATGAGGAGAGGACAGAATCTACCGTTGTTGTCAGTAATGTTACCGAGGATAATCATAAGAACCACAGAGAATGCGACGATTTATCCCGGATCGATCGCGATCAACTTCTTCAGATTGAAAAGCAGCAGTCCAGTTTACTTGATCTCGTGCAGAAATTCATGGGCAACTCGCAAGCTGGAATGCGTTCGTTGGAGACTCGTGTACAACGGCTAGAGCTAGCACTGGATGGGATCTCATATGATTTGGCTTTGTCAAGTGGAAGGATGACCAAAGTCAAGTCACGCCGCAGCTCGTGTTGCCTGCTACCTGGTGCTGATTTTTGGAGTTCCAAGTTCTGGAGGAAAACAGAAGGCAGGTACTCAATGCCAGGGCTTCCTAATTCCAGGGGCATTGCACCGGCGGTAGCCATGCGCTACATAGCAGATGACAGTGGCAATGCTGAAGCACTGGAGAACCTTAGGTTTCAGCTCCAGGATAGGAGTGGGTTCATTGTAAACCCTTTGGCAGAGATTCGGAGTGACTCAAGGCGTATATCAGATGCCACACGTCACTAG

Protein Analysis

629

Amino Acids

68.55

Weight (kDa)

9.32

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOR1L1_N PF24714 6 - 278 8.2e-114 TORTIFOLIA1 N-terminal
HEAT_EF3_N PF24987 50 - 173 9.5e-07 EF3 N-terminal HEAT repeat
HEAT_ECM29 PF24492 59 - 133 9.5e-07 Proteasome adapter and scaffold protein ECM29, HEAT-repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010759)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G62580 AT5G62580
fragaria_vesca FvH4_5g16200 FvH4_5g16200 FvH4_5g16200 FvH4_5g16200
malus_domestica MD06G1183000.v1.1 MD14G1188900.v1.1
prunus_persica Prupe.5G181300_v2.0.a1
pyrus_communis pycom06g16200
rosa_chinensis RchiOBHm_Chr7g0179911
rosa_laevigata RLG00000005310
rosa_multiflora Rmu_sc0012773.1_g000008
rosa_roxburghii Rroxscaffold_3G00273320
rosa_rugosa Rorug06G0429200
rosa_samantha Rh7AG029300 Rh7BG028500 Rh7CG030200 Rh7DG029600
rosa_wichuraiana Rw7G002350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 47, 323
AasI GACNNNNNNGTC 1 cut(s) 302
Acc36I ACCTGC 3 cut(s) 47, 323, 1677
AccB7I CCANNNNNTGG 1 cut(s) 1668
AccII CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
AccIII TCCGGA 1 cut(s) 974
AclI AACGTT 1 cut(s) 758
AclWI GGATC 7 cut(s) 303, 899, 912, 1241, 1321, 1430, 1571
AcsI RAATTY 2 cut(s) 1292, 1487
AcuI CTGAAG 4 cut(s) 401, 1116, 1427, 1794
AcyI GRCGYC 5 cut(s) 162, 452, 465, 599, 934
AfaI GTAC 7 cut(s) 129, 183, 248, 1066, 1255, 1536, 1691
AfeI AGCGCT 1 cut(s) 693
AfiI CCNNNNNNNGG 6 cut(s) 105, 292, 448, 454, 974, 1668
AflIII ACRYGT 2 cut(s) 723, 1877
AgsI TTSAA 4 cut(s) 739, 991, 1072, 1451
AhdI GACNNNNNGTC 3 cut(s) 194, 238, 727
AjiI CACGTC 2 cut(s) 349, 1880
AjnI CCWGG 7 cut(s) 447, 967, 1096, 1639, 1699, 1715, 1803
Alw21I GWGCWC 2 cut(s) 93, 1290
Alw26I GTCTC 3 cut(s) 180, 714, 1520
Alw44I GTGCAC 1 cut(s) 1286
AlwI GGATC 7 cut(s) 303, 899, 912, 1241, 1321, 1430, 1571
Ama87I CYCGRG 1 cut(s) 515
Aor13HI TCCGGA 1 cut(s) 974
Aor51HI AGCGCT 1 cut(s) 693
AoxI GGCC 4 cut(s) 438, 666, 678, 1182
ApaLI GTGCAC 1 cut(s) 1286
ApeKI GCWGC 6 cut(s) 80, 502, 559, 654, 1456, 1620
ApoI RAATTY 2 cut(s) 1292, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 1051, 1083
Asp700I GAANNNNTTC 2 cut(s) 1270, 1516
AspLEI GCGC 6 cut(s) 400, 472, 559, 694, 1166, 1746
AspS9I GGNCC 6 cut(s) 108, 415, 439, 666, 747, 1182
AsuC2I CCSGG 5 cut(s) 29, 106, 293, 479, 1420
AsuHPI GGTGA 8 cut(s) 28, 199, 256, 265, 343, 592, 796, 938
AsuNHI GCTAGC 1 cut(s) 1549
AvaI CYCGRG 1 cut(s) 515
AvaII GGWCC 3 cut(s) 108, 415, 747
AxyI CCTNAGG 1 cut(s) 1790
BaeGI GKGCMC 1 cut(s) 1290
BaeI ACNNNNGTAYC 2 cut(s) 111, 144
BamHI GGATCC 1 cut(s) 904
BanII GRGCYC 1 cut(s) 93
BarI GAAGNNNNNNTAC 2 cut(s) 1114, 1146
BauI CACGAG 4 cut(s) 1317, 1478, 1530, 1624
BbsI GAAGAC 2 cut(s) 25, 1064
Bbv12I GWGCWC 2 cut(s) 93, 1290
BbvI GCAGC 6 cut(s) 92, 489, 546, 666, 1468, 1632
BccI CCATC 9 cut(s) 107, 207, 811, 895, 917, 923, 945, 1201, 1553
BceAI ACGGC 4 cut(s) 244, 287, 311, 1556
BcgI CGANNNNNNTGC 2 cut(s) 297, 331
BciT130I CCWGG 7 cut(s) 449, 969, 1098, 1641, 1701, 1717, 1805
BcnI CCSGG 5 cut(s) 29, 106, 293, 479, 1420
BcoDI GTCTC 3 cut(s) 180, 714, 1520
BfaI CTAG 5 cut(s) 951, 1011, 1544, 1550, 1885
BfoI RGCGCY 3 cut(s) 560, 695, 1167
BfuAI ACCTGC 3 cut(s) 47, 323, 1677
BglI GCCNNNNNGGC 2 cut(s) 704, 1007
BmcAI AGTACT 1 cut(s) 1066
Bme18I GGWCC 3 cut(s) 108, 415, 747
BmeRI GACNNNNNGTC 3 cut(s) 194, 238, 727
BmeT110I CYCGRG 1 cut(s) 515
BmgBI CACGTC 2 cut(s) 349, 1880
BmgT120I GGNCC 6 cut(s) 108, 415, 439, 666, 747, 1182
BmrI ACTGGG 1 cut(s) 673
BmsI GCATC 5 cut(s) 156, 279, 468, 952, 1861
BmtI GCTAGC 1 cut(s) 1553
BmuI ACTGGG 1 cut(s) 673
BoxI GACNNNNGTC 1 cut(s) 1604
BpiI GAAGAC 2 cut(s) 25, 1064
BpmI CTGGAG 3 cut(s) 1690, 1787, 1802
Bpu10I CCTNAGC 1 cut(s) 650
BpuEI CTTGAG 3 cut(s) 5, 772, 1840
BpuMI CCSGG 5 cut(s) 29, 106, 293, 479, 1420
Bsa29I ATCGAT 1 cut(s) 1425
BsaBI GATNNNNATC 1 cut(s) 1431
BsaHI GRCGYC 5 cut(s) 162, 452, 465, 599, 934
BsaJI CCNNGG 7 cut(s) 509, 681, 1005, 1097, 1377, 1700, 1716
BsaWI WCCGGW 3 cut(s) 178, 940, 974
BsaXI ACNNNNNCTCC 2 cut(s) 281, 311
Bsc4I CCNNNNNNNGG 6 cut(s) 105, 292, 448, 454, 974, 1668
Bse118I RCCGGY 2 cut(s) 553, 1729
Bse1I ACTGG 5 cut(s) 151, 668, 1464, 1560, 1785
Bse21I CCTNAGG 1 cut(s) 1790
Bse3DI GCAATG 2 cut(s) 1722, 1774
Bse8I GATNNNNATC 1 cut(s) 1431
BseAI TCCGGA 1 cut(s) 974
BseBI CCWGG 7 cut(s) 449, 969, 1098, 1641, 1701, 1717, 1805
BseCI ATCGAT 1 cut(s) 1425
BseDI CCNNGG 7 cut(s) 509, 681, 1005, 1097, 1377, 1700, 1716
BseGI GGATG 6 cut(s) 122, 147, 937, 1216, 1564, 1602
BseJI GATNNNNATC 1 cut(s) 1431
BseLI CCNNNNNNNGG 6 cut(s) 105, 292, 448, 454, 974, 1668
BseMI GCAATG 2 cut(s) 1722, 1774
BseMII CTCAG 3 cut(s) 641, 1020, 1137
BseNI ACTGG 5 cut(s) 151, 668, 1464, 1560, 1785
BseRI GAGGAG 2 cut(s) 634, 1352
BseSI GKGCMC 1 cut(s) 1290
BseXI GCAGC 6 cut(s) 92, 489, 546, 666, 1468, 1632
BseYI CCCAGC 2 cut(s) 743, 1178
BsgI GTGCAG 1 cut(s) 1502
Bsh1236I CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
Bsh1285I CGRYCG 2 cut(s) 61, 1429
BshFI GGCC 4 cut(s) 440, 668, 680, 1184
BshVI ATCGAT 1 cut(s) 1425
BsiEI CGRYCG 2 cut(s) 61, 1429
BsiHKAI GWGCWC 2 cut(s) 93, 1290
BsiHKCI CYCGRG 1 cut(s) 515
BslFI GGGAC 2 cut(s) 226, 1114
BslI CCNNNNNNNGG 6 cut(s) 105, 292, 448, 454, 974, 1668
BsmAI GTCTC 3 cut(s) 180, 714, 1520
BsmFI GGGAC 2 cut(s) 226, 1114
BsmI GAATGC 3 cut(s) 919, 1409, 1518
BsnI GGCC 4 cut(s) 440, 668, 680, 1184
BsoBI CYCGRG 1 cut(s) 515
Bsp1286I GDGCHC 2 cut(s) 93, 1290
Bsp13I TCCGGA 1 cut(s) 974
Bsp1407I TGTACA 1 cut(s) 1534
Bsp68I TCGCGA 1 cut(s) 1431
BspANI GGCC 4 cut(s) 440, 668, 680, 1184
BspCNI CTCAG 3 cut(s) 642, 1021, 1138
BspDI ATCGAT 1 cut(s) 1425
BspEI TCCGGA 1 cut(s) 974
BspFNI CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
BspHI TCATGA 1 cut(s) 1333
BspMI ACCTGC 3 cut(s) 47, 323, 1677
BspOI GCTAGC 1 cut(s) 1553
BspPI GGATC 7 cut(s) 303, 899, 912, 1241, 1321, 1430, 1571
BsrDI GCAATG 2 cut(s) 1722, 1774
BsrFI RCCGGY 2 cut(s) 553, 1729
BsrGI TGTACA 1 cut(s) 1534
BsrI ACTGG 5 cut(s) 151, 668, 1464, 1560, 1785
BssAI RCCGGY 2 cut(s) 553, 1729
BssECI CCNNGG 7 cut(s) 509, 681, 1005, 1097, 1377, 1700, 1716
BssNI GRCGYC 5 cut(s) 162, 452, 465, 599, 934
BssSI CACGAG 4 cut(s) 1317, 1478, 1530, 1624
Bst2BI CACGAG 4 cut(s) 1317, 1478, 1530, 1624
Bst2UI CCWGG 7 cut(s) 449, 969, 1098, 1641, 1701, 1717, 1805
Bst4CI ACNGT 6 cut(s) 62, 211, 1121, 1196, 1357, 1763
Bst6I CTCTTC 3 cut(s) 367, 782, 1067
BstACI GRCGYC 5 cut(s) 162, 452, 465, 599, 934
BstAUI TGTACA 1 cut(s) 1534
BstC8I GCNNGC 7 cut(s) 495, 555, 696, 705, 1506, 1551, 1634
BstDEI CTNAG 4 cut(s) 650, 1029, 1146, 1790
BstDSI CCRYGG 1 cut(s) 681
BstF5I GGATG 6 cut(s) 122, 147, 937, 1216, 1564, 1602
BstFNI CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
BstH2I RGCGCY 3 cut(s) 560, 695, 1167
BstHHI GCGC 6 cut(s) 400, 472, 559, 694, 1166, 1746
BstMAI GTCTC 3 cut(s) 180, 714, 1520
BstMCI CGRYCG 2 cut(s) 61, 1429
BstNI CCWGG 7 cut(s) 449, 969, 1098, 1641, 1701, 1717, 1805
BstPAI GACNNNNGTC 1 cut(s) 1604
BstSLI GKGCMC 1 cut(s) 1290
BstUI CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
BstV1I GCAGC 6 cut(s) 92, 489, 546, 666, 1468, 1632
BstV2I GAAGAC 2 cut(s) 25, 1064
BstX2I RGATCY 3 cut(s) 904, 1313, 1563
BstXI CCANNNNNNTGG 1 cut(s) 493
BstYI RGATCY 3 cut(s) 904, 1313, 1563
Bsu15I ATCGAT 1 cut(s) 1425
Bsu36I CCTNAGG 1 cut(s) 1790
BsuRI GGCC 4 cut(s) 440, 668, 680, 1184
BsuTUI ATCGAT 1 cut(s) 1425
BtgI CCRYGG 1 cut(s) 681
BtgZI GCGATG 2 cut(s) 85, 975
BtrI CACGTC 2 cut(s) 349, 1880
BtsCI GGATG 6 cut(s) 122, 147, 937, 1216, 1564, 1602
BtsI GCAGTG 1 cut(s) 1047
BtsIMutI CAGTG 4 cut(s) 1047, 1553, 1768, 1778
BtuMI TCGCGA 1 cut(s) 1431
BveI ACCTGC 3 cut(s) 47, 323, 1677
Cac8I GCNNGC 7 cut(s) 495, 555, 696, 705, 1506, 1551, 1634
CciI TCATGA 1 cut(s) 1333
CfoI GCGC 6 cut(s) 400, 472, 559, 694, 1166, 1746
Cfr10I RCCGGY 2 cut(s) 553, 1729
Cfr13I GGNCC 6 cut(s) 108, 415, 439, 666, 747, 1182
Cfr42I CCGCGG 1 cut(s) 684
ClaI ATCGAT 1 cut(s) 1425
CseI GACGC 8 cut(s) 170, 184, 404, 441, 473, 576, 588, 942
CsiI ACCWGGT 1 cut(s) 1639
Csp6I GTAC 7 cut(s) 128, 182, 247, 1065, 1254, 1535, 1690
CspCI CAANNNNNGTGG 2 cut(s) 1279, 1314
CviAII CATG 3 cut(s) 1334, 1492, 1741
CviQI GTAC 7 cut(s) 128, 182, 247, 1065, 1254, 1535, 1690
DdeI CTNAG 4 cut(s) 650, 1029, 1146, 1790
DrdI GACNNNNNNGTC 1 cut(s) 302
DriI GACNNNNNGTC 3 cut(s) 194, 238, 727
DseDI GACNNNNNNGTC 1 cut(s) 302
Eam1104I CTCTTC 3 cut(s) 367, 782, 1067
Eam1105I GACNNNNNGTC 3 cut(s) 194, 238, 727
EarI CTCTTC 3 cut(s) 367, 782, 1067
EciI GGCGGA 3 cut(s) 289, 701, 1014
Ecl136II GAGCTC 1 cut(s) 91
Eco24I GRGCYC 1 cut(s) 93
Eco47I GGWCC 3 cut(s) 108, 415, 747
Eco47III AGCGCT 1 cut(s) 693
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 4 cut(s) 401, 1116, 1427, 1794
Eco81I CCTNAGG 1 cut(s) 1790
Eco88I CYCGRG 1 cut(s) 515
EcoICRI GAGCTC 1 cut(s) 91
EcoO109I RGGNCCY 3 cut(s) 415, 747, 1182
EcoRII CCWGG 7 cut(s) 447, 967, 1096, 1639, 1699, 1715, 1803
EcoT38I GRGCYC 1 cut(s) 93
FaeI CATG 3 cut(s) 1337, 1495, 1744
FaqI GGGAC 2 cut(s) 226, 1114
FatI CATG 3 cut(s) 1333, 1491, 1740
FauI CCCGC 1 cut(s) 16
FauNDI CATATG 1 cut(s) 1570
FokI GGATG 6 cut(s) 109, 134, 924, 1223, 1571, 1609
FriOI GRGCYC 1 cut(s) 93
FspBI CTAG 5 cut(s) 951, 1011, 1544, 1550, 1885
GlaI GCGC 6 cut(s) 399, 471, 558, 693, 1165, 1745
GsaI CCCAGC 2 cut(s) 747, 1182
GsuI CTGGAG 3 cut(s) 1690, 1787, 1802
HaeII RGCGCY 3 cut(s) 560, 695, 1167
HaeIII GGCC 4 cut(s) 440, 668, 680, 1184
HgaI GACGC 8 cut(s) 170, 184, 404, 441, 473, 576, 588, 942
HhaI GCGC 6 cut(s) 400, 472, 559, 694, 1166, 1746
Hin1I GRCGYC 5 cut(s) 162, 452, 465, 599, 934
Hin1II CATG 3 cut(s) 1337, 1495, 1744
Hin6I GCGC 6 cut(s) 398, 470, 557, 692, 1164, 1744
HinP1I GCGC 6 cut(s) 398, 470, 557, 692, 1164, 1744
HphI GGTGA 8 cut(s) 28, 199, 256, 265, 343, 592, 796, 938
Hpy166II GTNNAC 5 cut(s) 156, 1288, 1469, 1535, 1828
Hpy8I GTNNAC 5 cut(s) 156, 1288, 1469, 1535, 1828
HpyAV CCTTC 7 cut(s) 670, 1081, 1140, 1224, 1260, 1587, 1676
HpyCH4III ACNGT 6 cut(s) 62, 211, 1121, 1196, 1357, 1763
HpyCH4IV ACGT 7 cut(s) 348, 566, 725, 758, 1103, 1252, 1879
HpyCH4V TGCA 5 cut(s) 147, 917, 1288, 1483, 1727
HpyF3I CTNAG 4 cut(s) 650, 1029, 1146, 1790
HpySE526I ACGT 7 cut(s) 348, 566, 725, 758, 1103, 1252, 1879
Hsp92I GRCGYC 5 cut(s) 162, 452, 465, 599, 934
Hsp92II CATG 3 cut(s) 1337, 1495, 1744
HspAI GCGC 6 cut(s) 398, 470, 557, 692, 1164, 1744
Kpn2I TCCGGA 1 cut(s) 974
KroI GCCGGC 1 cut(s) 553
KroNI GCCGGC 1 cut(s) 555
KspI CCGCGG 1 cut(s) 684
Lsp1109I GCAGC 6 cut(s) 92, 489, 546, 666, 1468, 1632
LweI GCATC 5 cut(s) 156, 279, 468, 952, 1861
MabI ACCWGGT 1 cut(s) 1639
MaeI CTAG 5 cut(s) 951, 1011, 1544, 1550, 1885
MaeII ACGT 7 cut(s) 348, 566, 725, 758, 1103, 1252, 1879
MaeIII GTNAC 7 cut(s) 62, 349, 605, 1372, 1611, 1850, 1880
MfeI CAATTG 1 cut(s) 986
MflI RGATCY 3 cut(s) 904, 1313, 1563
MhlI GDGCHC 2 cut(s) 93, 1290
MluCI AATT 4 cut(s) 986, 1292, 1487, 1711
MlyI GAGTC 4 cut(s) 227, 290, 1522, 1847
MmeI TCCRAC 5 cut(s) 81, 192, 711, 873, 1503
MroI TCCGGA 1 cut(s) 974
MroNI GCCGGC 1 cut(s) 553
MroXI GAANNNNTTC 2 cut(s) 1270, 1516
MseI TTAA 1 cut(s) 1200
MspA1I CMGCKG 1 cut(s) 683
MunI CAATTG 1 cut(s) 986
Mva1269I GAATGC 3 cut(s) 919, 1409, 1518
MvaI CCWGG 7 cut(s) 449, 969, 1098, 1641, 1701, 1717, 1805
MvnI CGCG 8 cut(s) 288, 398, 470, 587, 671, 683, 871, 1431
NaeI GCCGGC 1 cut(s) 555
NciI CCSGG 5 cut(s) 29, 106, 293, 479, 1420
NdeI CATATG 1 cut(s) 1570
NgoMIV GCCGGC 1 cut(s) 553
NheI GCTAGC 1 cut(s) 1549
NlaIII CATG 3 cut(s) 1337, 1495, 1744
NmeAIII GCCGAG 1 cut(s) 986
NmuCI GTSAC 6 cut(s) 62, 349, 605, 1611, 1850, 1880
NruI TCGCGA 1 cut(s) 1431
PaeR7I CTCGAG 1 cut(s) 515
PagI TCATGA 1 cut(s) 1333
PaqCI CACCTGC 2 cut(s) 47, 323
PcsI WCGNNNNNNNCGW 6 cut(s) 84, 242, 471, 494, 584, 596
PctI GAATGC 3 cut(s) 919, 1409, 1518
PdiI GCCGGC 1 cut(s) 555
PdmI GAANNNNTTC 2 cut(s) 1270, 1516
PfeI GAWTC 6 cut(s) 766, 808, 835, 1093, 1349, 1843
PflMI CCANNNNNTGG 1 cut(s) 1668
PfoI TCCNGGA 2 cut(s) 1418, 1803
Ple19I CGATCG 1 cut(s) 1429
PleI GAGTC 4 cut(s) 227, 290, 1522, 1847
PpsI GAGTC 4 cut(s) 227, 290, 1522, 1847
PpuMI RGGWCCY 2 cut(s) 415, 747
PshAI GACNNNNGTC 1 cut(s) 1604
Psp124BI GAGCTC 1 cut(s) 93
Psp1406I AACGTT 1 cut(s) 758
Psp5II RGGWCCY 2 cut(s) 415, 747
Psp6I CCWGG 7 cut(s) 447, 967, 1096, 1639, 1699, 1715, 1803
PspFI CCCAGC 2 cut(s) 743, 1178
PspGI CCWGG 7 cut(s) 447, 967, 1096, 1639, 1699, 1715, 1803
PspPI GGNCC 6 cut(s) 108, 415, 439, 666, 747, 1182
PspPPI RGGWCCY 2 cut(s) 415, 747
PsuI RGATCY 3 cut(s) 904, 1313, 1563
PvuI CGATCG 1 cut(s) 1429
RruI TCGCGA 1 cut(s) 1431
RsaI GTAC 7 cut(s) 129, 183, 248, 1066, 1255, 1536, 1691
RsaNI GTAC 7 cut(s) 128, 182, 247, 1065, 1254, 1535, 1690
SacI GAGCTC 1 cut(s) 93
SacII CCGCGG 1 cut(s) 684
SaqAI TTAA 1 cut(s) 1200
Sau96I GGNCC 6 cut(s) 108, 415, 439, 666, 747, 1182
ScaI AGTACT 1 cut(s) 1066
SchI GAGTC 4 cut(s) 227, 290, 1522, 1847
SduI GDGCHC 2 cut(s) 93, 1290
SexAI ACCWGGT 1 cut(s) 1639
SfaNI GCATC 5 cut(s) 156, 279, 468, 952, 1861
Sfr274I CTCGAG 1 cut(s) 515
Sfr303I CCGCGG 1 cut(s) 684
SgrAI CRCCGGYG 1 cut(s) 1729
SgrBI CCGCGG 1 cut(s) 684
SinI GGWCC 3 cut(s) 108, 415, 747
SlaI CTCGAG 1 cut(s) 515
SmlI CTYRAG 4 cut(s) 20, 515, 751, 1855
SmoI CTYRAG 4 cut(s) 20, 515, 751, 1855
Sse9I AATT 4 cut(s) 986, 1292, 1487, 1711
SspMI CTAG 5 cut(s) 951, 1011, 1544, 1550, 1885
SstI GAGCTC 1 cut(s) 93
TaaI ACNGT 6 cut(s) 62, 211, 1121, 1196, 1357, 1763
TaiI ACGT 7 cut(s) 351, 569, 728, 761, 1106, 1255, 1882
TaqI TCGA 4 cut(s) 114, 462, 516, 1425
TasI AATT 4 cut(s) 986, 1292, 1487, 1711
TatI WGTACW 2 cut(s) 1064, 1534
TauI GCSGC 8 cut(s) 283, 388, 470, 671, 683, 686, 871, 1620
TfiI GAWTC 6 cut(s) 766, 808, 835, 1093, 1349, 1843
Tru1I TTAA 1 cut(s) 1200
Tru9I TTAA 1 cut(s) 1200
TscAI CASTG 4 cut(s) 1054, 1560, 1768, 1785
TseFI GTSAC 6 cut(s) 62, 349, 605, 1611, 1850, 1880
TseI GCWGC 6 cut(s) 80, 502, 559, 654, 1456, 1620
Tsp45I GTSAC 6 cut(s) 62, 349, 605, 1611, 1850, 1880
TspDTI ATGAA 3 cut(s) 821, 1480, 1810
TspGWI ACGGA 5 cut(s) 115, 422, 552, 624, 1317
TspRI CASTG 4 cut(s) 1054, 1560, 1768, 1785
Van91I CCANNNNNTGG 1 cut(s) 1668
VneI GTGCAC 1 cut(s) 1286
VpaK11BI GGWCC 3 cut(s) 108, 415, 747
XapI RAATTY 2 cut(s) 1292, 1487
XbaI TCTAGA 1 cut(s) 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 1811
XhoI CTCGAG 1 cut(s) 515
XmnI GAANNNNTTC 2 cut(s) 1270, 1516
XspI CTAG 5 cut(s) 951, 1011, 1544, 1550, 1885
ZrmI AGTACT 1 cut(s) 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.