DNA gyrase subunit A
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g04210 |
| rosa_chinensis | RchiOBHm_Chr1g0331311 |
| rosa_multiflora | Rmu_sc0005956.1_g000014 Rmu_sc0005956.1_g000017 Rmu_sc0011261.1_g000004 |
| rosa_samantha | Rh1AG117400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 246 |
| AciI | CCGC | 3 cut(s) | 427, 448, 475 |
| AclWI | GGATC | 1 cut(s) | 324 |
| AcoI | YGGCCR | 1 cut(s) | 81 |
| AcuI | CTGAAG | 2 cut(s) | 186, 215 |
| AfaI | GTAC | 2 cut(s) | 299, 564 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AflII | CTTAAG | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 277, 438, 554 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 228, 260 |
| AluBI | AGCT | 2 cut(s) | 170, 557 |
| AluI | AGCT | 2 cut(s) | 170, 557 |
| Alw21I | GWGCWC | 1 cut(s) | 55 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 324 |
| AoxI | GGCC | 2 cut(s) | 81, 199 |
| ApaI | GGGCCC | 1 cut(s) | 203 |
| ApeKI | GCWGC | 3 cut(s) | 134, 326, 557 |
| AspS9I | GGNCC | 2 cut(s) | 199, 200 |
| AsuC2I | CCSGG | 1 cut(s) | 271 |
| AsuNHI | GCTAGC | 1 cut(s) | 113 |
| AxyI | CCTNAGG | 1 cut(s) | 537 |
| BaeGI | GKGCMC | 1 cut(s) | 203 |
| BalI | TGGCCA | 1 cut(s) | 83 |
| BanII | GRGCYC | 1 cut(s) | 203 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 55 |
| BbvI | GCAGC | 3 cut(s) | 146, 338, 544 |
| BccI | CCATC | 2 cut(s) | 103, 356 |
| BceAI | ACGGC | 1 cut(s) | 545 |
| BclI | TGATCA | 1 cut(s) | 481 |
| BcnI | CCSGG | 1 cut(s) | 271 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| BfaI | CTAG | 4 cut(s) | 69, 114, 186, 389 |
| BfrI | CTTAAG | 1 cut(s) | 28 |
| BfuAI | ACCTGC | 1 cut(s) | 246 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 402 |
| BisI | GCNGC | 4 cut(s) | 135, 327, 476, 558 |
| BlsI | GCNGC | 4 cut(s) | 136, 328, 477, 559 |
| Bme1390I | CCNGG | 1 cut(s) | 271 |
| BmgT120I | GGNCC | 2 cut(s) | 199, 200 |
| BmiI | GGNNCC | 2 cut(s) | 201, 534 |
| BmrFI | CCNGG | 1 cut(s) | 271 |
| BmtI | GCTAGC | 1 cut(s) | 117 |
| BpuEI | CTTGAG | 1 cut(s) | 271 |
| BpuMI | CCSGG | 1 cut(s) | 271 |
| BsaJI | CCNNGG | 1 cut(s) | 203 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 146, 176 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| Bse21I | CCTNAGG | 1 cut(s) | 537 |
| BseDI | CCNNGG | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseMII | CTCAG | 2 cut(s) | 23, 528 |
| BseRI | GAGGAG | 3 cut(s) | 256, 545, 554 |
| BseSI | GKGCMC | 1 cut(s) | 203 |
| BseXI | GCAGC | 3 cut(s) | 146, 338, 544 |
| BsgI | GTGCAG | 1 cut(s) | 96 |
| BshFI | GGCC | 2 cut(s) | 83, 201 |
| BsiHKAI | GWGCWC | 1 cut(s) | 55 |
| BsiSI | CCGG | 1 cut(s) | 271 |
| BslFI | GGGAC | 1 cut(s) | 430 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| BsmFI | GGGAC | 1 cut(s) | 430 |
| BsnI | GGCC | 2 cut(s) | 83, 201 |
| Bsp120I | GGGCCC | 1 cut(s) | 199 |
| Bsp1286I | GDGCHC | 2 cut(s) | 55, 203 |
| Bsp143I | GATC | 2 cut(s) | 316, 481 |
| BspACI | CCGC | 3 cut(s) | 427, 448, 475 |
| BspANI | GGCC | 2 cut(s) | 83, 201 |
| BspCNI | CTCAG | 2 cut(s) | 22, 529 |
| BspLI | GGNNCC | 2 cut(s) | 201, 534 |
| BspMI | ACCTGC | 1 cut(s) | 246 |
| BspOI | GCTAGC | 1 cut(s) | 117 |
| BspPI | GGATC | 1 cut(s) | 324 |
| BspTI | CTTAAG | 1 cut(s) | 28 |
| BssECI | CCNNGG | 1 cut(s) | 203 |
| BssMI | GATC | 2 cut(s) | 316, 481 |
| Bst4CI | ACNGT | 2 cut(s) | 409, 444 |
| BstAFI | CTTAAG | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 1 cut(s) | 115 |
| BstDEI | CTNAG | 4 cut(s) | 9, 92, 310, 537 |
| BstDSI | CCRYGG | 1 cut(s) | 203 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 253 |
| BstKTI | GATC | 2 cut(s) | 319, 484 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 2 cut(s) | 316, 481 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 402 |
| BstSCI | CCNGG | 1 cut(s) | 269 |
| BstSLI | GKGCMC | 1 cut(s) | 203 |
| BstV1I | GCAGC | 3 cut(s) | 146, 338, 544 |
| Bsu36I | CCTNAGG | 1 cut(s) | 537 |
| BsuRI | GGCC | 2 cut(s) | 83, 201 |
| BtgI | CCRYGG | 1 cut(s) | 203 |
| BtgZI | GCGATG | 1 cut(s) | 387 |
| BtsI | GCAGTG | 1 cut(s) | 84 |
| BtsIMutI | CAGTG | 1 cut(s) | 84 |
| BveI | ACCTGC | 1 cut(s) | 246 |
| Cac8I | GCNNGC | 1 cut(s) | 115 |
| Cfr13I | GGNCC | 2 cut(s) | 199, 200 |
| Csp6I | GTAC | 2 cut(s) | 298, 563 |
| CviAII | CATG | 4 cut(s) | 85, 139, 485, 566 |
| CviQI | GTAC | 2 cut(s) | 298, 563 |
| DdeI | CTNAG | 4 cut(s) | 9, 92, 310, 537 |
| DpnI | GATC | 2 cut(s) | 318, 483 |
| DpnII | GATC | 2 cut(s) | 316, 481 |
| EaeI | YGGCCR | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 1 cut(s) | 203 |
| Eco57I | CTGAAG | 2 cut(s) | 186, 215 |
| Eco81I | CCTNAGG | 1 cut(s) | 537 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 253 |
| EcoO109I | RGGNCCY | 1 cut(s) | 199 |
| EcoT38I | GRGCYC | 1 cut(s) | 203 |
| FaeI | CATG | 4 cut(s) | 88, 142, 488, 569 |
| FaiI | YATR | 6 cut(s) | 86, 128, 140, 453, 486, 567 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 293, 325 |
| FaqI | GGGAC | 1 cut(s) | 430 |
| FatI | CATG | 4 cut(s) | 84, 138, 484, 565 |
| FauI | CCCGC | 2 cut(s) | 420, 455 |
| FbaI | TGATCA | 1 cut(s) | 481 |
| Fnu4HI | GCNGC | 4 cut(s) | 135, 327, 476, 558 |
| FriOI | GRGCYC | 1 cut(s) | 203 |
| Fsp4HI | GCNGC | 4 cut(s) | 135, 327, 476, 558 |
| FspBI | CTAG | 4 cut(s) | 69, 114, 186, 389 |
| GluI | GCNGC | 4 cut(s) | 135, 327, 476, 558 |
| HaeIII | GGCC | 2 cut(s) | 83, 201 |
| HapII | CCGG | 1 cut(s) | 271 |
| Hin1II | CATG | 4 cut(s) | 88, 142, 488, 569 |
| HincII | GTYRAC | 1 cut(s) | 412 |
| HindII | GTYRAC | 1 cut(s) | 412 |
| HinfI | GANTC | 1 cut(s) | 496 |
| HpaII | CCGG | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 2 cut(s) | 121, 412 |
| Hpy188I | TCNGA | 5 cut(s) | 12, 166, 195, 223, 291 |
| Hpy8I | GTNNAC | 2 cut(s) | 121, 412 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyCH4III | ACNGT | 2 cut(s) | 409, 444 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 455 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 402 |
| HpyF3I | CTNAG | 4 cut(s) | 9, 92, 310, 537 |
| Hsp92II | CATG | 4 cut(s) | 88, 142, 488, 569 |
| Ksp22I | TGATCA | 1 cut(s) | 481 |
| Kzo9I | GATC | 2 cut(s) | 316, 481 |
| LmnI | GCTCC | 2 cut(s) | 175, 532 |
| LpnPI | CCDG | 6 cut(s) | 24, 144, 241, 284, 474, 549 |
| Lsp1109I | GCAGC | 3 cut(s) | 146, 338, 544 |
| MaeI | CTAG | 4 cut(s) | 69, 114, 186, 389 |
| MalI | GATC | 2 cut(s) | 318, 483 |
| MboI | GATC | 2 cut(s) | 316, 481 |
| MboII | GAAGA | 1 cut(s) | 371 |
| MhlI | GDGCHC | 2 cut(s) | 55, 203 |
| MlsI | TGGCCA | 1 cut(s) | 83 |
| MluCI | AATT | 1 cut(s) | 417 |
| MluNI | TGGCCA | 1 cut(s) | 83 |
| MnlI | CCTC | 8 cut(s) | 46, 91, 150, 277, 307, 523, 532, 535 |
| Mox20I | TGGCCA | 1 cut(s) | 83 |
| MscI | TGGCCA | 1 cut(s) | 83 |
| MseI | TTAA | 4 cut(s) | 29, 420, 470, 512 |
| Msp20I | TGGCCA | 1 cut(s) | 83 |
| MspCI | CTTAAG | 1 cut(s) | 28 |
| MspI | CCGG | 1 cut(s) | 271 |
| MspR9I | CCNGG | 1 cut(s) | 271 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 402 |
| NciI | CCSGG | 1 cut(s) | 271 |
| NdeII | GATC | 2 cut(s) | 316, 481 |
| NheI | GCTAGC | 1 cut(s) | 113 |
| NlaIII | CATG | 4 cut(s) | 88, 142, 488, 569 |
| NlaIV | GGNNCC | 2 cut(s) | 201, 534 |
| PfeI | GAWTC | 1 cut(s) | 496 |
| PkrI | GCNGC | 4 cut(s) | 136, 328, 477, 559 |
| PspN4I | GGNNCC | 2 cut(s) | 201, 534 |
| PspOMI | GGGCCC | 1 cut(s) | 199 |
| PspPI | GGNCC | 2 cut(s) | 199, 200 |
| RsaI | GTAC | 2 cut(s) | 299, 564 |
| RsaNI | GTAC | 2 cut(s) | 298, 563 |
| SaqAI | TTAA | 4 cut(s) | 29, 420, 470, 512 |
| SatI | GCNGC | 4 cut(s) | 135, 327, 476, 558 |
| Sau3AI | GATC | 2 cut(s) | 316, 481 |
| Sau96I | GGNCC | 2 cut(s) | 199, 200 |
| ScrFI | CCNGG | 1 cut(s) | 271 |
| SduI | GDGCHC | 2 cut(s) | 55, 203 |
| SetI | ASST | 5 cut(s) | 172, 260, 426, 546, 559 |
| SmlI | CTYRAG | 2 cut(s) | 28, 250 |
| SmoI | CTYRAG | 2 cut(s) | 28, 250 |
| Sse9I | AATT | 1 cut(s) | 417 |
| SsiI | CCGC | 3 cut(s) | 427, 448, 475 |
| SspMI | CTAG | 4 cut(s) | 69, 114, 186, 389 |
| StyD4I | CCNGG | 1 cut(s) | 269 |
| TaaI | ACNGT | 2 cut(s) | 409, 444 |
| TaqI | TCGA | 1 cut(s) | 49 |
| TasI | AATT | 1 cut(s) | 417 |
| TauI | GCSGC | 1 cut(s) | 478 |
| TfiI | GAWTC | 1 cut(s) | 496 |
| Tru1I | TTAA | 4 cut(s) | 29, 420, 470, 512 |
| Tru9I | TTAA | 4 cut(s) | 29, 420, 470, 512 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TseI | GCWGC | 3 cut(s) | 134, 326, 557 |
| TspDTI | ATGAA | 1 cut(s) | 390 |
| TspGWI | ACGGA | 1 cut(s) | 539 |
| TspRI | CASTG | 1 cut(s) | 84 |
| Vha464I | CTTAAG | 1 cut(s) | 28 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 253 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 138 |
| XspI | CTAG | 4 cut(s) | 69, 114, 186, 389 |