No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52230 |
| fragaria_vesca | FvH4_7g06450 FvH4_7g06450 |
| prunus_persica | Prupe.2G091100_v2.0.a1 |
| pyrus_communis | pycom02g21010 pycom07g05590 |
| rosa_chinensis | RchiOBHm_Chr1g0334731 |
| rosa_laevigata | RLG00000029426 |
| rosa_multiflora | Rmu_sc0000574.1_g000003 Rmu_sc0006031.1_g000021 |
| rosa_roxburghii | Rroxscaffold_4G00316630 |
| rosa_rugosa | Rorug01G0115400 Rorug01G0115500 |
| rosa_samantha | Rh1AG140400 Rh1BG107600 Rh1CG132400 Rh1DG144500 |
| rosa_wichuraiana | Rw1G011590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 176, 211, 368, 479, 488 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AcuI | CTGAAG | 1 cut(s) | 371 |
| AcyI | GRCGYC | 1 cut(s) | 428 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 250, 410 |
| AgsI | TTSAA | 3 cut(s) | 186, 331, 338 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 637 |
| AluBI | AGCT | 3 cut(s) | 334, 450, 544 |
| AluI | AGCT | 3 cut(s) | 334, 450, 544 |
| ApeKI | GCWGC | 1 cut(s) | 541 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| AseI | ATTAAT | 1 cut(s) | 92 |
| AspLEI | GCGC | 1 cut(s) | 463 |
| AspS9I | GGNCC | 2 cut(s) | 129, 296 |
| AvaII | GGWCC | 2 cut(s) | 129, 296 |
| BanII | GRGCYC | 1 cut(s) | 507 |
| BbsI | GAAGAC | 3 cut(s) | 288, 521, 615 |
| BbvI | GCAGC | 1 cut(s) | 553 |
| BccI | CCATC | 2 cut(s) | 117, 585 |
| BceAI | ACGGC | 1 cut(s) | 198 |
| BisI | GCNGC | 3 cut(s) | 177, 369, 542 |
| BlsI | GCNGC | 3 cut(s) | 178, 370, 543 |
| Bme18I | GGWCC | 2 cut(s) | 129, 296 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 637 |
| BmgT120I | GGNCC | 2 cut(s) | 129, 296 |
| BmiI | GGNNCC | 3 cut(s) | 298, 393, 474 |
| BpiI | GAAGAC | 3 cut(s) | 288, 521, 615 |
| BpmI | CTGGAG | 1 cut(s) | 157 |
| BsaBI | GATNNNNATC | 1 cut(s) | 272 |
| BsaHI | GRCGYC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 1 cut(s) | 395 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 250, 410 |
| Bse118I | RCCGGY | 1 cut(s) | 436 |
| Bse8I | GATNNNNATC | 1 cut(s) | 272 |
| BseDI | CCNNGG | 1 cut(s) | 395 |
| BseGI | GGATG | 1 cut(s) | 128 |
| BseJI | GATNNNNATC | 1 cut(s) | 272 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 250, 410 |
| BseMII | CTCAG | 1 cut(s) | 238 |
| BseRI | GAGGAG | 2 cut(s) | 404, 465 |
| BseXI | GCAGC | 1 cut(s) | 553 |
| BsgI | GTGCAG | 1 cut(s) | 534 |
| BsiSI | CCGG | 1 cut(s) | 437 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 250, 410 |
| Bsp1286I | GDGCHC | 1 cut(s) | 507 |
| BspACI | CCGC | 5 cut(s) | 176, 211, 368, 479, 488 |
| BspCNI | CTCAG | 1 cut(s) | 237 |
| BspLI | GGNNCC | 3 cut(s) | 298, 393, 474 |
| BspQI | GCTCTTC | 1 cut(s) | 495 |
| BsrFI | RCCGGY | 1 cut(s) | 436 |
| BssAI | RCCGGY | 1 cut(s) | 436 |
| BssECI | CCNNGG | 1 cut(s) | 395 |
| BssNI | GRCGYC | 1 cut(s) | 428 |
| BssT1I | CCWWGG | 1 cut(s) | 395 |
| Bst4CI | ACNGT | 1 cut(s) | 639 |
| Bst6I | CTCTTC | 2 cut(s) | 323, 495 |
| BstACI | GRCGYC | 1 cut(s) | 428 |
| BstC8I | GCNNGC | 3 cut(s) | 202, 373, 438 |
| BstDEI | CTNAG | 1 cut(s) | 224 |
| BstF5I | GGATG | 1 cut(s) | 128 |
| BstHHI | GCGC | 1 cut(s) | 463 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 210 |
| BstV1I | GCAGC | 1 cut(s) | 553 |
| BstV2I | GAAGAC | 3 cut(s) | 288, 521, 615 |
| BtsCI | GGATG | 1 cut(s) | 128 |
| Cac8I | GCNNGC | 3 cut(s) | 202, 373, 438 |
| CfoI | GCGC | 1 cut(s) | 463 |
| Cfr10I | RCCGGY | 1 cut(s) | 436 |
| Cfr13I | GGNCC | 2 cut(s) | 129, 296 |
| CseI | GACGC | 2 cut(s) | 364, 436 |
| CviJI | RGCY | 9 cut(s) | 334, 394, 436, 440, 450, 473, 505, 544, 580 |
| CviKI_1 | RGCY | 9 cut(s) | 334, 394, 436, 440, 450, 473, 505, 544, 580 |
| DdeI | CTNAG | 1 cut(s) | 224 |
| DraI | TTTAAA | 1 cut(s) | 109 |
| DriI | GACNNNNNGTC | 1 cut(s) | 637 |
| Eam1104I | CTCTTC | 2 cut(s) | 323, 495 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 637 |
| EarI | CTCTTC | 2 cut(s) | 323, 495 |
| EciI | GGCGGA | 2 cut(s) | 200, 468 |
| Eco130I | CCWWGG | 1 cut(s) | 395 |
| Eco24I | GRGCYC | 1 cut(s) | 507 |
| Eco47I | GGWCC | 2 cut(s) | 129, 296 |
| Eco57I | CTGAAG | 1 cut(s) | 371 |
| EcoO109I | RGGNCCY | 2 cut(s) | 129, 296 |
| EcoT14I | CCWWGG | 1 cut(s) | 395 |
| EcoT38I | GRGCYC | 1 cut(s) | 507 |
| ErhI | CCWWGG | 1 cut(s) | 395 |
| FaiI | YATR | 5 cut(s) | 12, 20, 167, 509, 533 |
| Fnu4HI | GCNGC | 3 cut(s) | 177, 369, 542 |
| FokI | GGATG | 1 cut(s) | 135 |
| FriOI | GRGCYC | 1 cut(s) | 507 |
| Fsp4HI | GCNGC | 3 cut(s) | 177, 369, 542 |
| GlaI | GCGC | 1 cut(s) | 462 |
| GluI | GCNGC | 3 cut(s) | 177, 369, 542 |
| GsuI | CTGGAG | 1 cut(s) | 157 |
| HapII | CCGG | 1 cut(s) | 437 |
| HgaI | GACGC | 2 cut(s) | 364, 436 |
| HhaI | GCGC | 1 cut(s) | 463 |
| Hin1I | GRCGYC | 1 cut(s) | 428 |
| Hin6I | GCGC | 1 cut(s) | 461 |
| HinP1I | GCGC | 1 cut(s) | 461 |
| HindIII | AAGCTT | 1 cut(s) | 332 |
| HinfI | GANTC | 1 cut(s) | 228 |
| HpaII | CCGG | 1 cut(s) | 437 |
| Hpy166II | GTNNAC | 1 cut(s) | 218 |
| Hpy188I | TCNGA | 3 cut(s) | 37, 227, 628 |
| Hpy188III | TCNNGA | 3 cut(s) | 136, 349, 454 |
| Hpy8I | GTNNAC | 1 cut(s) | 218 |
| Hpy99I | CGWCG | 2 cut(s) | 380, 635 |
| HpyAV | CCTTC | 4 cut(s) | 142, 355, 404, 597 |
| HpyCH4III | ACNGT | 1 cut(s) | 639 |
| HpyCH4V | TGCA | 2 cut(s) | 386, 551 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 210 |
| HpyF3I | CTNAG | 1 cut(s) | 224 |
| Hsp92I | GRCGYC | 1 cut(s) | 428 |
| HspAI | GCGC | 1 cut(s) | 461 |
| KroI | GCCGGC | 1 cut(s) | 436 |
| KroNI | GCCGGC | 1 cut(s) | 438 |
| LguI | GCTCTTC | 1 cut(s) | 495 |
| LmnI | GCTCC | 2 cut(s) | 391, 478 |
| LpnPI | CCDG | 9 cut(s) | 121, 362, 375, 417, 450, 495, 523, 551, 581 |
| Lsp1109I | GCAGC | 1 cut(s) | 553 |
| MboII | GAAGA | 6 cut(s) | 293, 310, 419, 512, 526, 615 |
| MhlI | GDGCHC | 1 cut(s) | 507 |
| MluCI | AATT | 2 cut(s) | 102, 110 |
| MnlI | CCTC | 8 cut(s) | 113, 120, 148, 233, 382, 486, 551, 567 |
| MroNI | GCCGGC | 1 cut(s) | 436 |
| MseI | TTAA | 4 cut(s) | 23, 92, 101, 108 |
| MspI | CCGG | 1 cut(s) | 437 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 210 |
| NaeI | GCCGGC | 1 cut(s) | 438 |
| NgoMIV | GCCGGC | 1 cut(s) | 436 |
| NlaIV | GGNNCC | 3 cut(s) | 298, 393, 474 |
| PciSI | GCTCTTC | 1 cut(s) | 495 |
| PdiI | GCCGGC | 1 cut(s) | 438 |
| PfeI | GAWTC | 1 cut(s) | 228 |
| PkrI | GCNGC | 3 cut(s) | 178, 370, 543 |
| PpuMI | RGGWCCY | 2 cut(s) | 129, 296 |
| PshBI | ATTAAT | 1 cut(s) | 92 |
| Psp5II | RGGWCCY | 2 cut(s) | 129, 296 |
| PspN4I | GGNNCC | 3 cut(s) | 298, 393, 474 |
| PspPI | GGNCC | 2 cut(s) | 129, 296 |
| PspPPI | RGGWCCY | 2 cut(s) | 129, 296 |
| SapI | GCTCTTC | 1 cut(s) | 495 |
| SaqAI | TTAA | 4 cut(s) | 23, 92, 101, 108 |
| SatI | GCNGC | 3 cut(s) | 177, 369, 542 |
| Sau96I | GGNCC | 2 cut(s) | 129, 296 |
| SduI | GDGCHC | 1 cut(s) | 507 |
| SetI | ASST | 6 cut(s) | 134, 225, 336, 452, 546, 578 |
| SinI | GGWCC | 2 cut(s) | 129, 296 |
| Sse9I | AATT | 2 cut(s) | 102, 110 |
| SsiI | CCGC | 5 cut(s) | 176, 211, 368, 479, 488 |
| SspI | AATATT | 1 cut(s) | 96 |
| StyI | CCWWGG | 1 cut(s) | 395 |
| TaaI | ACNGT | 1 cut(s) | 639 |
| TasI | AATT | 2 cut(s) | 102, 110 |
| TauI | GCSGC | 2 cut(s) | 179, 371 |
| TfiI | GAWTC | 1 cut(s) | 228 |
| Tru1I | TTAA | 4 cut(s) | 23, 92, 101, 108 |
| Tru9I | TTAA | 4 cut(s) | 23, 92, 101, 108 |
| TseI | GCWGC | 1 cut(s) | 541 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 648 |
| VpaK11BI | GGWCC | 2 cut(s) | 129, 296 |
| VspI | ATTAAT | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 110 |