Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0005718

Physical Location & Seq

Genomic Coordinates Reverse (-)

5409205 .. 5412122

Gene Structure 2918 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g06110.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGCGTAACCCCAACAAAATATTTCCCACAATACTAGAATTCCCAACCACCGAAACACACCACCAAACAACAATGGTGTCCGAATCGAGCAGCGGCAGCGCTGCAACTCCTCCACCCAGCAGTCCCATCAAAACGGTGGTCGTTTTGGTCCAAGAGAACCGCTCCTTCGACCACATGCTGGGATGGATGAAGTCCCTAAACCCCGAGATCAACGGGGTCACCGGCTCCGAATCAAACCCCATTTCCACCTCTGACGCCAACTCAACCCAAGTCTTCTTCCGCGACAACTCTGCCTACGTCGACCCTGACCCCGGCCACTCTATCCAAGCCATCTACGAGCAAGTCTTTGGCGAGCCGTGGACGGAGGCCTCCACTTCCAAAACCCTACCTCCTAAAATGAACGGTTTCGCCCAAAACGCTGAGAAGACACAAACCGGTTTAGCTGAGACGGTGATGAGTGGTTTTAAGCCAGAAAACGTCGCAGTTTACAGGGAGCTAGTGAAGGAGTTTGCGGTGTGCGACCGGTGGTTTGCGTCCGTTCCGGCTTCGACGCAGCCAAACCGGCAGTACGTGCACTCTGCGACGTCGCATGGGCTGACGAGCAACGATACGCAGAAGCTGATTGAAGGGATGCCTCAGAAGACTATATTTGAGTCGTTGGACGAAGAAGGCTTTTCTTTCGGAATTTACTATCAGTACCCTCCTGCTACCCTTTTGTATAGAAACCTTAGAAAGTTGAAGTACATTAAAAACTTCCATCAGTTTGATCTAACATTCAAGAAGCACTGCAAGGAGGGAAAGTTACCAAACTATGTGGTGGTGGAGCAAAGGTTCTTTGATCTGCTATCAATACCTGGGAACGATGATCATCCATCTCACGACGTCTCTGAAGGCCAGAAGTTTATAAAAGAAGTGTACGAAGCACTAAGAGCAAGTCCCCAATGGCCTGAAATGCTGTTCGTTATAATATATGACGAGCATGGTGGTTTCTACGATCACGTTCCAACACCTGTTACAGATGTTCCTAGTCCGGATGATATCGTTGGTCCCGAGCCATACAACTTTAAATTTGATCGTCTTGGTGTTCGGGTTCCAGCCATTTTAATTTCTCCGTGGATTGAACGCGGAACAGTGTTGCATGCGCCTTCAGGGCCATATCCCTCGTCACAGTTCGAGCACTCCTCAATCTCAGCAACTGTTAAGAAGATTTTCAATCTGAAAGAGTTTCTGACAAAGCGTGATGCATGGGCGGGAACCTTTGACGTTGTCCTCAATAGAACAAGTCCAAGAACTGATTGTCCAGCTACTTTGCCTGATCCTATGAAACTACGAGAGGCTGTATCTAAAGACGGCGCAAAAGTAAGTGATTTTCAAGAAGAATTAGTACAATTGGCTGCGGCATTAAATGGAGACCATAGAAAAGATATATATCCCCACAAACTGGTGGAGAACATGACTGTTTCAGAGGCTGTCAAATATTGTGAAGAAGCATTTAACAAATTCTTACATGAATGTGAGAAAGCCAGGGAGAGTGGAACAGATGAATCTGAGATTGTCGTCTGTGCAACCTCACCTACACCGCCCTCCACCAAGTCGTTTGCTCAAAAAATATTTTCTTGTTTGGTTTGTGATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0004620 GO:0004629 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005911 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0008081 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009395 GO:0009405 GO:0009506 GO:0009605 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016042 GO:0016298 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030054 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034480 GO:0035821 GO:0042578 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0046434 GO:0050896 GO:0051701 GO:0051704 GO:0051716 GO:0051817 GO:0052008 GO:0052043 GO:0052111 GO:0052185 GO:0052188 GO:0052368 GO:0052642 GO:0055044 GO:0071496 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00562 ko00564 ko00565 ko01100 ko01110 ko02024 ko04919 map00562 map00564 map00565 map01100 map01110 map02024 map04919

Pfam Domains

Protein Families

Phosphoesterase

Protein Analysis

546

Amino Acids

61.12

Weight (kDa)

5.55

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005718)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03520 AT3G03520 AT3G03530
fragaria_vesca	FvH4_7g07140
malus_domestica	MD07G1077400.v1.1 MD07G1077500.v1.1
prunus_persica	Prupe.2G098600_v2.0.a1 Prupe.2G098700_v2.0.a1
pyrus_communis	pycom07g06100 pycom07g06110
rosa_chinensis	RchiOBHm_Chr1g0337121 RchiOBHm_Chr1g0337171
rosa_laevigata	RLG00000029302 RLG00000029303
rosa_multiflora	Rmu_sc0002160.1_g000021
rosa_roxburghii	Rroxscaffold_4G00314910 Rroxscaffold_4G00314920
rosa_rugosa	Rorug01G0131900.1
rosa_samantha	Rh1AG152000 Rh1AG152500 Rh1BG121200 Rh1BG121300 Rh1CG143200 Rh1CG143500 Rh1DG159200 Rh1DG159800
rosa_wichuraiana	Rw1G012440 Rw1G012460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	905, 965
AatII	GACGTC	2 cut(s)	587, 885
AccB7I	CCANNNNNTGG	2 cut(s)	178, 1441
AccBSI	CCGCTC	1 cut(s)	162
AccI	GTMKAC	1 cut(s)	300
AccII	CGCG	2 cut(s)	282, 1125
AccIII	TCCGGA	1 cut(s)	1030
AciI	CCGC	8 cut(s)	93, 160, 280, 512, 1125, 1250, 1397, 1580
AclWI	GGATC	1 cut(s)	1310
AcoI	YGGCCR	1 cut(s)	313
AcsI	RAATTY	4 cut(s)	38, 684, 1067, 1499
AcuI	CTGAAG	2 cut(s)	909, 1131
AcyI	GRCGYC	3 cut(s)	255, 584, 882
AfaI	GTAC	5 cut(s)	569, 698, 743, 917, 1386
AfeI	AGCGCT	1 cut(s)	100
AfiI	CCNNNNNNNGG	3 cut(s)	178, 311, 1441
AgeI	ACCGGT	2 cut(s)	434, 522
AgsI	TTSAA	6 cut(s)	626, 739, 778, 1121, 1213, 1373
AjnI	CCWGG	2 cut(s)	853, 1523
AloI	GAACNNNNNNTCC	4 cut(s)	815, 847, 1282, 1314
AluBI	AGCT	4 cut(s)	443, 496, 619, 1304
AluI	AGCT	4 cut(s)	443, 496, 619, 1304
Alw21I	GWGCWC	2 cut(s)	576, 1179
Alw26I	GTCTC	3 cut(s)	440, 889, 1404
Alw44I	GTGCAC	1 cut(s)	572
AlwI	GGATC	1 cut(s)	1310
AlwNI	CAGNNNCTG	3 cut(s)	619, 1196, 1469
Ama87I	CYCGRG	2 cut(s)	203, 1049
Aor13HI	TCCGGA	1 cut(s)	1030
Aor51HI	AGCGCT	1 cut(s)	100
AoxI	GGCC	5 cut(s)	313, 366, 892, 944, 1151
ApaLI	GTGCAC	1 cut(s)	572
ApeKI	GCWGC	5 cut(s)	90, 96, 101, 553, 1394
ApoI	RAATTY	4 cut(s)	38, 684, 1067, 1499
ArsI	GACNNNNNNTTYG	4 cut(s)	123, 155, 512, 544
AsiGI	ACCGGT	2 cut(s)	434, 522
Asp700I	GAANNNNTTC	2 cut(s)	404, 1208
AspLEI	GCGC	3 cut(s)	101, 1144, 1355
AspS9I	GGNCC	3 cut(s)	148, 1046, 1151
AsuC2I	CCSGG	1 cut(s)	312
AsuHPI	GGTGA	3 cut(s)	211, 463, 1563
AvaI	CYCGRG	2 cut(s)	203, 1049
AvaII	GGWCC	2 cut(s)	148, 1046
BaeGI	GKGCMC	1 cut(s)	576
BarI	GAAGNNNNNNTAC	2 cut(s)	1368, 1400
BbsI	GAAGAC	3 cut(s)	265, 431, 647
Bbv12I	GWGCWC	2 cut(s)	576, 1179
BbvI	GCAGC	5 cut(s)	88, 102, 108, 565, 1381
BccI	CCATC	5 cut(s)	134, 177, 338, 765, 880
BceAI	ACGGC	2 cut(s)	340, 1366
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	2 cut(s)	855, 1525
BclI	TGATCA	2 cut(s)	865, 1630
BcnI	CCSGG	1 cut(s)	312
BcoDI	GTCTC	3 cut(s)	440, 889, 1404
BfaI	CTAG	3 cut(s)	35, 497, 1026
BfoI	RGCGCY	1 cut(s)	102
BglI	GCCNNNNNGGC	2 cut(s)	562, 1150
BisI	GCNGC	7 cut(s)	91, 94, 97, 102, 554, 1395, 1398
BlsI	GCNGC	7 cut(s)	92, 95, 98, 103, 555, 1396, 1399
Bme1390I	CCNGG	3 cut(s)	312, 855, 1525
Bme18I	GGWCC	2 cut(s)	148, 1046
BmeT110I	CYCGRG	2 cut(s)	203, 1049
BmgT120I	GGNCC	3 cut(s)	148, 1046, 1151
BmiI	GGNNCC	4 cut(s)	226, 1048, 1092, 1255
BmrFI	CCNGG	3 cut(s)	312, 855, 1525
BmsI	GCATC	2 cut(s)	621, 1231
BpiI	GAAGAC	3 cut(s)	265, 431, 647
BplI	GAGNNNNNCTC	4 cut(s)	146, 178, 1166, 1198
BpuMI	CCSGG	1 cut(s)	312
BsaAI	YACGTR	1 cut(s)	571
BsaBI	GATNNNNATC	2 cut(s)	867, 1428
BsaHI	GRCGYC	3 cut(s)	255, 584, 882
BsaI	GGTCTC	1 cut(s)	1404
BsaJI	CCNNGG	5 cut(s)	310, 356, 854, 1112, 1524
BsaWI	WCCGGW	3 cut(s)	434, 522, 1030
BsaXI	ACNNNNNCTCC	6 cut(s)	373, 403, 785, 815, 815, 845
Bsc4I	CCNNNNNNNGG	3 cut(s)	178, 311, 1441
Bse118I	RCCGGY	4 cut(s)	221, 434, 522, 561
Bse1I	ACTGG	1 cut(s)	1446
Bse8I	GATNNNNATC	2 cut(s)	867, 1428
BseAI	TCCGGA	1 cut(s)	1030
BseBI	CCWGG	2 cut(s)	855, 1525
BseDI	CCNNGG	5 cut(s)	310, 356, 854, 1112, 1524
BseGI	GGATG	5 cut(s)	188, 192, 636, 868, 1039
BseJI	GATNNNNATC	2 cut(s)	867, 1428
BseLI	CCNNNNNNNGG	3 cut(s)	178, 311, 1441
BseMII	CTCAG	5 cut(s)	411, 435, 650, 1203, 1539
BseNI	ACTGG	1 cut(s)	1446
BseRI	GAGGAG	2 cut(s)	99, 1171
BseSI	GKGCMC	1 cut(s)	576
BseXI	GCAGC	5 cut(s)	88, 102, 108, 565, 1381
BseYI	CCCAGC	2 cut(s)	116, 178
Bsh1236I	CGCG	2 cut(s)	282, 1125
Bsh1285I	CGRYCG	1 cut(s)	523
BshFI	GGCC	5 cut(s)	315, 368, 894, 946, 1153
BshTI	ACCGGT	2 cut(s)	434, 522
BsiEI	CGRYCG	1 cut(s)	523
BsiHKAI	GWGCWC	2 cut(s)	576, 1179
BsiHKCI	CYCGRG	2 cut(s)	203, 1049
BsiSI	CCGG	7 cut(s)	222, 312, 435, 523, 542, 562, 1031
BslFI	GGGAC	4 cut(s)	108, 178, 921, 1032
BslI	CCNNNNNNNGG	3 cut(s)	178, 311, 1441
BsmAI	GTCTC	3 cut(s)	440, 889, 1404
BsmBI	CGTCTC	2 cut(s)	440, 889
BsmFI	GGGAC	4 cut(s)	108, 178, 921, 1032
BsnI	GGCC	5 cut(s)	315, 368, 894, 946, 1153
Bso31I	GGTCTC	1 cut(s)	1404
BsoBI	CYCGRG	2 cut(s)	203, 1049
Bsp1286I	GDGCHC	2 cut(s)	576, 1179
Bsp13I	TCCGGA	1 cut(s)	1030
Bsp143I	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
BspACI	CCGC	8 cut(s)	93, 160, 280, 512, 1125, 1250, 1397, 1580
BspANI	GGCC	5 cut(s)	315, 368, 894, 946, 1153
BspCNI	CTCAG	5 cut(s)	412, 436, 649, 1202, 1540
BspEI	TCCGGA	1 cut(s)	1030
BspFNI	CGCG	2 cut(s)	282, 1125
BspLI	GGNNCC	4 cut(s)	226, 1048, 1092, 1255
BspPI	GGATC	1 cut(s)	1310
BspTNI	GGTCTC	1 cut(s)	1404
BsrBI	CCGCTC	1 cut(s)	162
BsrFI	RCCGGY	4 cut(s)	221, 434, 522, 561
BsrI	ACTGG	1 cut(s)	1446
BssAI	RCCGGY	4 cut(s)	221, 434, 522, 561
BssECI	CCNNGG	5 cut(s)	310, 356, 854, 1112, 1524
BssMI	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
BssNI	GRCGYC	3 cut(s)	255, 584, 882
Bst2UI	CCWGG	2 cut(s)	855, 1525
Bst4CI	ACNGT	7 cut(s)	136, 404, 451, 1132, 1170, 1198, 1459
BstACI	GRCGYC	3 cut(s)	255, 584, 882
BstAPI	GCANNNNNTGC	1 cut(s)	571
BstBAI	YACGTR	1 cut(s)	571
BstC8I	GCNNGC	2 cut(s)	353, 1140
BstDEI	CTNAG	7 cut(s)	420, 444, 636, 728, 926, 1189, 1548
BstDSI	CCRYGG	2 cut(s)	356, 1112
BstEII	GGTNACC	1 cut(s)	217
BstF5I	GGATG	5 cut(s)	188, 192, 636, 868, 1039
BstFNI	CGCG	2 cut(s)	282, 1125
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	3 cut(s)	101, 1144, 1355
BstKTI	GATC	8 cut(s)	210, 769, 841, 868, 997, 1075, 1318, 1633
BstMAI	GTCTC	3 cut(s)	440, 889, 1404
BstMBI	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
BstMCI	CGRYCG	1 cut(s)	523
BstMWI	GCNNNNNNNGC	7 cut(s)	96, 416, 562, 571, 929, 952, 1150
BstNI	CCWGG	2 cut(s)	855, 1525
BstNSI	RCATGY	2 cut(s)	178, 1142
BstPI	GGTNACC	1 cut(s)	217
BstSCI	CCNGG	3 cut(s)	310, 853, 1523
BstSLI	GKGCMC	1 cut(s)	576
BstUI	CGCG	2 cut(s)	282, 1125
BstV1I	GCAGC	5 cut(s)	88, 102, 108, 565, 1381
BstV2I	GAAGAC	3 cut(s)	265, 431, 647
BsuRI	GGCC	5 cut(s)	315, 368, 894, 946, 1153
BtgI	CCRYGG	2 cut(s)	356, 1112
BtsCI	GGATG	5 cut(s)	188, 192, 636, 868, 1039
BtsI	GCAGTG	1 cut(s)	784
BtsIMutI	CAGTG	3 cut(s)	784, 1137, 1633
Cac8I	GCNNGC	2 cut(s)	353, 1140
CaiI	CAGNNNCTG	3 cut(s)	619, 1196, 1469
CfoI	GCGC	3 cut(s)	101, 1144, 1355
Cfr10I	RCCGGY	4 cut(s)	221, 434, 522, 561
Cfr13I	GGNCC	3 cut(s)	148, 1046, 1151
CseI	GACGC	3 cut(s)	263, 522, 559
Csp6I	GTAC	5 cut(s)	568, 697, 742, 916, 1385
CspAI	ACCGGT	2 cut(s)	434, 522
CspCI	CAANNNNNGTGG	2 cut(s)	795, 830
CviAII	CATG	7 cut(s)	175, 590, 980, 1139, 1245, 1453, 1508
CviQI	GTAC	5 cut(s)	568, 697, 742, 916, 1385
DdeI	CTNAG	7 cut(s)	420, 444, 636, 728, 926, 1189, 1548
DpnI	GATC	8 cut(s)	209, 768, 840, 867, 996, 1074, 1317, 1632
DpnII	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
DraI	TTTAAA	1 cut(s)	1066
EaeI	YGGCCR	1 cut(s)	313
Eco147I	AGGCCT	1 cut(s)	368
Eco31I	GGTCTC	1 cut(s)	1404
Eco32I	GATATC	1 cut(s)	1039
Eco47I	GGWCC	2 cut(s)	148, 1046
Eco47III	AGCGCT	1 cut(s)	100
Eco57I	CTGAAG	2 cut(s)	909, 1131
Eco88I	CYCGRG	2 cut(s)	203, 1049
Eco91I	GGTNACC	1 cut(s)	217
EcoO65I	GGTNACC	1 cut(s)	217
EcoRI	GAATTC	1 cut(s)	38
EcoRII	CCWGG	2 cut(s)	853, 1523
EcoRV	GATATC	1 cut(s)	1039
EcoT22I	ATGCAT	1 cut(s)	1246
Esp3I	CGTCTC	2 cut(s)	440, 889
FaeI	CATG	7 cut(s)	178, 593, 983, 1142, 1248, 1456, 1511
FaqI	GGGAC	4 cut(s)	108, 178, 921, 1032
FatI	CATG	7 cut(s)	174, 589, 979, 1138, 1244, 1452, 1507
FauI	CCCGC	1 cut(s)	1243
FbaI	TGATCA	2 cut(s)	865, 1630
FblI	GTMKAC	1 cut(s)	300
Fnu4HI	GCNGC	7 cut(s)	91, 94, 97, 102, 554, 1395, 1398
FokI	GGATG	5 cut(s)	195, 199, 643, 855, 1046
Fsp4HI	GCNGC	7 cut(s)	91, 94, 97, 102, 554, 1395, 1398
FspBI	CTAG	3 cut(s)	35, 497, 1026
GlaI	GCGC	3 cut(s)	100, 1143, 1354
GluI	GCNGC	7 cut(s)	91, 94, 97, 102, 554, 1395, 1398
GsaI	CCCAGC	2 cut(s)	120, 182
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	5 cut(s)	315, 368, 894, 946, 1153
HapII	CCGG	7 cut(s)	222, 312, 435, 523, 542, 562, 1031
HgaI	GACGC	3 cut(s)	263, 522, 559
HhaI	GCGC	3 cut(s)	101, 1144, 1355
Hin1I	GRCGYC	3 cut(s)	255, 584, 882
Hin1II	CATG	7 cut(s)	178, 593, 983, 1142, 1248, 1456, 1511
Hin6I	GCGC	3 cut(s)	99, 1142, 1353
HinP1I	GCGC	3 cut(s)	99, 1142, 1353
HincII	GTYRAC	1 cut(s)	301
HindII	GTYRAC	1 cut(s)	301
HinfI	GANTC	4 cut(s)	83, 230, 653, 1544
HpaII	CCGG	7 cut(s)	222, 312, 435, 523, 542, 562, 1031
HphI	GGTGA	3 cut(s)	211, 463, 1563
Hpy166II	GTNNAC	5 cut(s)	301, 360, 487, 574, 916
Hpy188III	TCNNGA	5 cut(s)	778, 878, 1031, 1049, 1373
Hpy8I	GTNNAC	5 cut(s)	301, 360, 487, 574, 916
Hpy99I	CGWCG	6 cut(s)	302, 482, 553, 586, 589, 884
HpyAV	CCTTC	6 cut(s)	175, 496, 620, 662, 884, 1155
HpyCH4III	ACNGT	7 cut(s)	136, 404, 451, 1132, 1170, 1198, 1459
HpyCH4IV	ACGT	7 cut(s)	297, 477, 570, 584, 882, 999, 1263
HpyCH4V	TGCA	6 cut(s)	104, 574, 789, 1138, 1244, 1565
HpyF10VI	GCNNNNNNNGC	7 cut(s)	96, 416, 562, 571, 929, 952, 1150
HpyF3I	CTNAG	7 cut(s)	420, 444, 636, 728, 926, 1189, 1548
HpySE526I	ACGT	7 cut(s)	297, 477, 570, 584, 882, 999, 1263
Hsp92I	GRCGYC	3 cut(s)	255, 584, 882
Hsp92II	CATG	7 cut(s)	178, 593, 983, 1142, 1248, 1456, 1511
HspAI	GCGC	3 cut(s)	99, 1142, 1353
Kpn2I	TCCGGA	1 cut(s)	1030
Ksp22I	TGATCA	2 cut(s)	865, 1630
Kzo9I	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
LmnI	GCTCC	4 cut(s)	167, 230, 493, 823
Lsp1109I	GCAGC	5 cut(s)	88, 102, 108, 565, 1381
LweI	GCATC	2 cut(s)	621, 1231
MaeI	CTAG	3 cut(s)	35, 497, 1026
MaeII	ACGT	7 cut(s)	297, 477, 570, 584, 882, 999, 1263
MaeIII	GTNAC	5 cut(s)	5, 217, 801, 1012, 1164
MalI	GATC	8 cut(s)	209, 768, 840, 867, 996, 1074, 1317, 1632
MbiI	CCGCTC	1 cut(s)	162
MboI	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
MboII	GAAGA	8 cut(s)	265, 268, 436, 652, 677, 1216, 1388, 1496
MfeI	CAATTG	1 cut(s)	1388
MhlI	GDGCHC	2 cut(s)	576, 1179
MluCI	AATT	7 cut(s)	38, 684, 1067, 1104, 1379, 1388, 1499
MlyI	GAGTC	1 cut(s)	662
MmeI	TCCRAC	2 cut(s)	639, 1028
Mph1103I	ATGCAT	1 cut(s)	1246
MroI	TCCGGA	1 cut(s)	1030
MroXI	GAANNNNTTC	2 cut(s)	404, 1208
MseI	TTAA	7 cut(s)	465, 747, 1065, 1103, 1200, 1403, 1494
MslI	CAYNNNNRTG	1 cut(s)	1512
MspA1I	CMGCKG	1 cut(s)	93
MspI	CCGG	7 cut(s)	222, 312, 435, 523, 542, 562, 1031
MspR9I	CCNGG	3 cut(s)	312, 855, 1525
MunI	CAATTG	1 cut(s)	1388
MvaI	CCWGG	2 cut(s)	855, 1525
MvnI	CGCG	2 cut(s)	282, 1125
MwoI	GCNNNNNNNGC	7 cut(s)	96, 416, 562, 571, 929, 952, 1150
NciI	CCSGG	1 cut(s)	312
NdeII	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
NlaIII	CATG	7 cut(s)	178, 593, 983, 1142, 1248, 1456, 1511
NlaIV	GGNNCC	4 cut(s)	226, 1048, 1092, 1255
NmuCI	GTSAC	2 cut(s)	217, 1164
NsiI	ATGCAT	1 cut(s)	1246
NspI	RCATGY	2 cut(s)	178, 1142
PaeI	GCATGC	1 cut(s)	1142
PceI	AGGCCT	1 cut(s)	368
PcsI	WCGNNNNNNNCGW	1 cut(s)	1047
PdmI	GAANNNNTTC	2 cut(s)	404, 1208
PfeI	GAWTC	3 cut(s)	83, 230, 1544
PflFI	GACNNNGTC	1 cut(s)	1265
PflMI	CCANNNNNTGG	2 cut(s)	178, 1441
PinAI	ACCGGT	2 cut(s)	434, 522
PkrI	GCNGC	7 cut(s)	92, 95, 98, 103, 555, 1396, 1399
PleI	GAGTC	1 cut(s)	661
PpsI	GAGTC	1 cut(s)	661
Ppu21I	YACGTR	1 cut(s)	571
PsiI	TTATAA	2 cut(s)	905, 965
Psp6I	CCWGG	2 cut(s)	853, 1523
PspEI	GGTNACC	1 cut(s)	217
PspFI	CCCAGC	2 cut(s)	116, 178
PspGI	CCWGG	2 cut(s)	853, 1523
PspN4I	GGNNCC	4 cut(s)	226, 1048, 1092, 1255
PspPI	GGNCC	3 cut(s)	148, 1046, 1151
PstNI	CAGNNNCTG	3 cut(s)	619, 1196, 1469
PsyI	GACNNNGTC	1 cut(s)	1265
RsaI	GTAC	5 cut(s)	569, 698, 743, 917, 1386
RsaNI	GTAC	5 cut(s)	568, 697, 742, 916, 1385
RseI	CAYNNNNRTG	1 cut(s)	1512
SalI	GTCGAC	1 cut(s)	299
SaqAI	TTAA	7 cut(s)	465, 747, 1065, 1103, 1200, 1403, 1494
SatI	GCNGC	7 cut(s)	91, 94, 97, 102, 554, 1395, 1398
Sau3AI	GATC	8 cut(s)	207, 766, 838, 865, 994, 1072, 1315, 1630
Sau96I	GGNCC	3 cut(s)	148, 1046, 1151
SchI	GAGTC	1 cut(s)	662
ScrFI	CCNGG	3 cut(s)	312, 855, 1525
SduI	GDGCHC	2 cut(s)	576, 1179
SfaNI	GCATC	2 cut(s)	621, 1231
SinI	GGWCC	2 cut(s)	148, 1046
SmiMI	CAYNNNNRTG	1 cut(s)	1512
SphI	GCATGC	1 cut(s)	1142
Sse9I	AATT	7 cut(s)	38, 684, 1067, 1104, 1379, 1388, 1499
SseBI	AGGCCT	1 cut(s)	368
SsiI	CCGC	8 cut(s)	93, 160, 280, 512, 1125, 1250, 1397, 1580
SspI	AATATT	3 cut(s)	21, 1478, 1611
SspMI	CTAG	3 cut(s)	35, 497, 1026
StuI	AGGCCT	1 cut(s)	368
StyD4I	CCNGG	3 cut(s)	310, 853, 1523
TaaI	ACNGT	7 cut(s)	136, 404, 451, 1132, 1170, 1198, 1459
TaiI	ACGT	7 cut(s)	300, 480, 573, 587, 885, 1002, 1266
TaqI	TCGA	5 cut(s)	86, 168, 300, 548, 1173
TasI	AATT	7 cut(s)	38, 684, 1067, 1104, 1379, 1388, 1499
TatI	WGTACW	2 cut(s)	741, 1384
TauI	GCSGC	2 cut(s)	96, 1400
TfiI	GAWTC	3 cut(s)	83, 230, 1544
Tru1I	TTAA	7 cut(s)	465, 747, 1065, 1103, 1200, 1403, 1494
Tru9I	TTAA	7 cut(s)	465, 747, 1065, 1103, 1200, 1403, 1494
TscAI	CASTG	2 cut(s)	791, 1137
TseFI	GTSAC	2 cut(s)	217, 1164
TseI	GCWGC	5 cut(s)	90, 96, 101, 553, 1394
Tsp45I	GTSAC	2 cut(s)	217, 1164
TspDTI	ATGAA	5 cut(s)	203, 413, 1337, 1524, 1557
TspGWI	ACGGA	3 cut(s)	377, 526, 1101
TspRI	CASTG	2 cut(s)	791, 1137
Tth111I	GACNNNGTC	1 cut(s)	1265
Van91I	CCANNNNNTGG	2 cut(s)	178, 1441
VneI	GTGCAC	1 cut(s)	572
VpaK11BI	GGWCC	2 cut(s)	148, 1046
XapI	RAATTY	4 cut(s)	38, 684, 1067, 1499
XceI	RCATGY	2 cut(s)	178, 1142
XcmI	CCANNNNNNNNNTGG	1 cut(s)	133
XmiI	GTMKAC	1 cut(s)	300
XmnI	GAANNNNTTC	2 cut(s)	404, 1208
XspI	CTAG	3 cut(s)	35, 497, 1026
ZraI	GACGTC	2 cut(s)	585, 883
Zsp2I	ATGCAT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.