Rh1AG152500

phospholipase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
28517818 .. 28522134
4317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG152500.1

Sequence Viewer

Length: 1242 bp
ATGGAGGGGTTCGCACAAAACGCCGAGACAACGCAGACGGGGTTGGCTGAGACGGTGATGAACGGGTTCAAGCCGGAGAACATTCCAGTGTATAGGGAGCTGGTGAAAGAGTTTGCAGTGTGTGACAGGTGGTTTGCTTCGGTGCCGGCGTCGACGCAGCCGAACCGGCAGTACGTGCACTCGGGGACGTCGCACGGACTTTCAGGGAATGATACGATCTTGCTGATTGAGGGGATGCCGCAGAAGACCATATTTGAGTCCGTGGAGGAAGCTGGTCACTCTTTCGGAATATACTATCAGACCCCTCCTGCCACACTTTTGTACAGGAATCTAAGAAAGTTGAAGTATATTGATAACTTCCATCAGTTTGATCTACATTTTAAGAAGCATTGCGAGGAGGGCAAATTACCAAACTATACGGTTGTGGAACAAAGATTCTTCGATCTATTGTCCCTCCCTGCCAACGATGATCACCCGTCTCATGACGTCTCAGAGGGCCAGAAATTCGTAAAGCAAGTGTACGAAGCATTACGATCAAGTCCTCAGTGGAATGAAATGTTGTTCATAATTGTATACGACGAGCATGGTGGATTCTATGATCATGTTCCGACACCTGTTAAAGATGTTCCTAGTCCTGATGACATCGCCGGTCCTGCGCCCTACAACTTTAAATTCGATCGTCTTGGTGTTAGGGTTCCGGCCTTCCTGATTTCTCCCTGGATTGAGCGTGCAACAGTGTTGCATGGACCTTCGGGGCCATATCCTTCATCAGAGTTTGAGCACTCCTCAATTGCAGCAACTGTTAAGAAGATTTTCAATCTAAAAGAGTTTCTCACAAAGCGTGATGCTTGGGCAGGAACCTTTGATGTTATTTTGACTAGAACAACTCCAAGAACTGATTGCCCAGTTACCTTGCCCGAACCGATGAAACTACGAGAAGCTGGATCTAAAGATGATGCAAAAATCAGTGACTTCCAAGAAGAACTAGTGCAATTGGCTGCAGCACTAAATGGGGATCACAAGAAGGATATATATCCCCACAAATTGGTGGAGAACATGACTGTTTCAGAGGCTCTCAAATATGTGGAAGGTGCGTTTAAAATGTTTCAAGATGAATGCCAGAAAGCCCGGGAAAATGGAACCGACGAATCCCAGATTATTGTCTGCACAACCTCTCCTACGCCGCAATCAGCAAAGTCGTTTGTTCATAAGATGTTCTCTTGTTTGATCTGTGATAATTGA

Protein Analysis

413

Amino Acids

46.68

Weight (kDa)

5.55

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphoesterase PF04185 1 - 275 7.9e-84 Phosphoesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 191, 489
AccB1I GGYRCC 1 cut(s) 142
AccB7I CCANNNNNTGG 1 cut(s) 1045
AccI GTMKAC 2 cut(s) 152, 573
AciI CCGC 2 cut(s) 239, 1184
AclWI GGATC 2 cut(s) 952, 1023
AcsI RAATTY 2 cut(s) 503, 671
AcyI GRCGYC 3 cut(s) 149, 188, 486
AfaI GTAC 3 cut(s) 173, 323, 521
AfiI CCNNNNNNNGG 1 cut(s) 1045
AgsI TTSAA 4 cut(s) 70, 343, 817, 1109
AhlI ACTAGT 1 cut(s) 985
AjnI CCWGG 1 cut(s) 716
AluBI AGCT 3 cut(s) 100, 272, 941
AluI AGCT 3 cut(s) 100, 272, 941
Alw21I GWGCWC 2 cut(s) 180, 783
Alw26I GTCTC 4 cut(s) 20, 44, 483, 493
Alw44I GTGCAC 1 cut(s) 176
AlwI GGATC 2 cut(s) 952, 1023
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 2 cut(s) 181, 1128
AoxI GGCC 3 cut(s) 496, 699, 755
ApaLI GTGCAC 1 cut(s) 176
ApeKI GCWGC 4 cut(s) 157, 794, 998, 1001
ApoI RAATTY 2 cut(s) 503, 671
ArsI GACNNNNNNTTYG 2 cut(s) 116, 148
Asp700I GAANNNNTTC 2 cut(s) 65, 812
AspLEI GCGC 1 cut(s) 658
AspS9I GGNCC 4 cut(s) 496, 650, 746, 755
AsuC2I CCSGG 2 cut(s) 1129, 1130
AsuHPI GGTGA 3 cut(s) 67, 115, 464
AvaI CYCGRG 2 cut(s) 181, 1128
AvaII GGWCC 2 cut(s) 650, 746
BaeGI GKGCMC 1 cut(s) 180
BanI GGYRCC 1 cut(s) 142
BbsI GAAGAC 1 cut(s) 251
Bbv12I GWGCWC 2 cut(s) 180, 783
BbvI GCAGC 4 cut(s) 169, 806, 985, 1013
BccI CCATC 1 cut(s) 369
BciT130I CCWGG 1 cut(s) 718
BclI TGATCA 2 cut(s) 469, 598
BcnI CCSGG 2 cut(s) 1129, 1130
BcoDI GTCTC 4 cut(s) 20, 44, 483, 493
BcuI ACTAGT 1 cut(s) 985
BfaI CTAG 3 cut(s) 630, 879, 986
BfmI CTRYAG 1 cut(s) 999
BglI GCCNNNNNGGC 1 cut(s) 166
BisI GCNGC 6 cut(s) 158, 239, 795, 999, 1002, 1184
BlsI GCNGC 6 cut(s) 159, 240, 796, 1000, 1003, 1185
Bme1390I CCNGG 3 cut(s) 718, 1129, 1130
Bme18I GGWCC 2 cut(s) 650, 746
BmeT110I CYCGRG 2 cut(s) 181, 1128
BmgT120I GGNCC 4 cut(s) 496, 650, 746, 755
BmiI GGNNCC 5 cut(s) 144, 696, 756, 859, 1141
BmrFI CCNGG 3 cut(s) 718, 1129, 1130
BmrI ACTGGG 1 cut(s) 899
BmsI GCATC 3 cut(s) 225, 835, 946
BmuI ACTGGG 1 cut(s) 899
BpiI GAAGAC 1 cut(s) 251
BplI GAGNNNNNCTC 2 cut(s) 770, 802
BpuMI CCSGG 2 cut(s) 1129, 1130
BsaAI YACGTR 1 cut(s) 175
BsaBI GATNNNNATC 1 cut(s) 1032
BsaHI GRCGYC 3 cut(s) 149, 188, 486
BsaJI CCNNGG 3 cut(s) 261, 716, 1128
BsaXI ACNNNNNCTCC 2 cut(s) 1159, 1189
Bsc4I CCNNNNNNNGG 1 cut(s) 1045
Bse118I RCCGGY 3 cut(s) 145, 165, 647
Bse1I ACTGG 2 cut(s) 86, 905
Bse3DI GCAATG 1 cut(s) 388
Bse8I GATNNNNATC 1 cut(s) 1032
BseBI CCWGG 1 cut(s) 718
BseDI CCNNGG 3 cut(s) 261, 716, 1128
BseGI GGATG 1 cut(s) 240
BseJI GATNNNNATC 1 cut(s) 1032
BseLI CCNNNNNNNGG 1 cut(s) 1045
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 3 cut(s) 39, 504, 557
BseNI ACTGG 2 cut(s) 86, 905
BseRI GAGGAG 2 cut(s) 410, 775
BseSI GKGCMC 1 cut(s) 180
BseXI GCAGC 4 cut(s) 169, 806, 985, 1013
BsgI GTGCAG 1 cut(s) 1150
Bsh1285I CGRYCG 1 cut(s) 679
BshFI GGCC 3 cut(s) 498, 701, 757
BshNI GGYRCC 1 cut(s) 142
BsiEI CGRYCG 1 cut(s) 679
BsiHKAI GWGCWC 2 cut(s) 180, 783
BsiHKCI CYCGRG 2 cut(s) 181, 1128
BsiSI CCGG 6 cut(s) 74, 146, 166, 648, 698, 1129
BslFI GGGAC 2 cut(s) 199, 436
BslI CCNNNNNNNGG 1 cut(s) 1045
BsmAI GTCTC 4 cut(s) 20, 44, 483, 493
BsmBI CGTCTC 3 cut(s) 44, 483, 493
BsmFI GGGAC 2 cut(s) 199, 436
BsmI GAATGC 1 cut(s) 1121
BsnI GGCC 3 cut(s) 498, 701, 757
BsoBI CYCGRG 2 cut(s) 181, 1128
Bsp1286I GDGCHC 2 cut(s) 180, 783
Bsp1407I TGTACA 1 cut(s) 321
BspACI CCGC 2 cut(s) 239, 1184
BspANI GGCC 3 cut(s) 498, 701, 757
BspCNI CTCAG 3 cut(s) 40, 503, 556
BspHI TCATGA 1 cut(s) 481
BspLI GGNNCC 5 cut(s) 144, 696, 756, 859, 1141
BspMAI CTGCAG 1 cut(s) 1003
BspPI GGATC 2 cut(s) 952, 1023
BspT107I GGYRCC 1 cut(s) 142
BsrDI GCAATG 1 cut(s) 388
BsrFI RCCGGY 3 cut(s) 145, 165, 647
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 2 cut(s) 86, 905
BssAI RCCGGY 3 cut(s) 145, 165, 647
BssECI CCNNGG 3 cut(s) 261, 716, 1128
BssNAI GTATAC 1 cut(s) 574
BssNI GRCGYC 3 cut(s) 149, 188, 486
Bst1107I GTATAC 1 cut(s) 574
Bst2UI CCWGG 1 cut(s) 718
Bst4CI ACNGT 5 cut(s) 55, 421, 736, 802, 1063
BstACI GRCGYC 3 cut(s) 149, 188, 486
BstAPI GCANNNNNTGC 1 cut(s) 175
BstAUI TGTACA 1 cut(s) 321
BstBAI YACGTR 1 cut(s) 175
BstC8I GCNNGC 2 cut(s) 147, 729
BstDEI CTNAG 4 cut(s) 48, 332, 490, 543
BstDSI CCRYGG 1 cut(s) 261
BstF5I GGATG 1 cut(s) 240
BstHHI GCGC 1 cut(s) 658
BstMAI GTCTC 4 cut(s) 20, 44, 483, 493
BstMCI CGRYCG 1 cut(s) 679
BstMWI GCNNNNNNNGC 5 cut(s) 20, 166, 175, 399, 653
BstNI CCWGG 1 cut(s) 718
BstSCI CCNGG 3 cut(s) 716, 1127, 1128
BstSFI CTRYAG 1 cut(s) 999
BstSLI GKGCMC 1 cut(s) 180
BstV1I GCAGC 4 cut(s) 169, 806, 985, 1013
BstV2I GAAGAC 1 cut(s) 251
BstX2I RGATCY 1 cut(s) 944
BstYI RGATCY 1 cut(s) 944
BstZ17I GTATAC 1 cut(s) 574
BsuRI GGCC 3 cut(s) 498, 701, 757
BtgI CCRYGG 1 cut(s) 261
BtgZI GCGATG 1 cut(s) 628
BtsCI GGATG 1 cut(s) 240
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 5 cut(s) 93, 123, 551, 741, 973
Cac8I GCNNGC 2 cut(s) 147, 729
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 481
CfoI GCGC 1 cut(s) 658
Cfr10I RCCGGY 3 cut(s) 145, 165, 647
Cfr13I GGNCC 4 cut(s) 496, 650, 746, 755
Cfr9I CCCGGG 1 cut(s) 1128
CseI GACGC 2 cut(s) 138, 163
Csp6I GTAC 3 cut(s) 172, 322, 520
CviAII CATG 5 cut(s) 482, 584, 602, 743, 1057
CviQI GTAC 3 cut(s) 172, 322, 520
DdeI CTNAG 4 cut(s) 48, 332, 490, 543
DraI TTTAAA 2 cut(s) 670, 1099
Eco47I GGWCC 2 cut(s) 650, 746
Eco88I CYCGRG 2 cut(s) 181, 1128
EcoRII CCWGG 1 cut(s) 716
Esp3I CGTCTC 3 cut(s) 44, 483, 493
FaeI CATG 5 cut(s) 485, 587, 605, 746, 1060
FaqI GGGAC 2 cut(s) 199, 436
FatI CATG 5 cut(s) 481, 583, 601, 742, 1056
FbaI TGATCA 2 cut(s) 469, 598
FblI GTMKAC 2 cut(s) 152, 573
Fnu4HI GCNGC 6 cut(s) 158, 239, 795, 999, 1002, 1184
FokI GGATG 1 cut(s) 247
Fsp4HI GCNGC 6 cut(s) 158, 239, 795, 999, 1002, 1184
FspBI CTAG 3 cut(s) 630, 879, 986
GlaI GCGC 1 cut(s) 657
GluI GCNGC 6 cut(s) 158, 239, 795, 999, 1002, 1184
HaeIII GGCC 3 cut(s) 498, 701, 757
HapII CCGG 6 cut(s) 74, 146, 166, 648, 698, 1129
HgaI GACGC 2 cut(s) 138, 163
HhaI GCGC 1 cut(s) 658
Hin1I GRCGYC 3 cut(s) 149, 188, 486
Hin1II CATG 5 cut(s) 485, 587, 605, 746, 1060
Hin6I GCGC 1 cut(s) 656
HinP1I GCGC 1 cut(s) 656
HincII GTYRAC 1 cut(s) 153
HindII GTYRAC 1 cut(s) 153
HinfI GANTC 5 cut(s) 257, 328, 435, 591, 1148
HpaII CCGG 6 cut(s) 74, 146, 166, 648, 698, 1129
HphI GGTGA 3 cut(s) 67, 115, 464
Hpy166II GTNNAC 4 cut(s) 153, 178, 520, 574
Hpy188I TCNGA 6 cut(s) 287, 300, 493, 609, 772, 1069
Hpy188III TCNNGA 4 cut(s) 482, 635, 706, 1109
Hpy8I GTNNAC 4 cut(s) 153, 178, 520, 574
Hpy99I CGWCG 5 cut(s) 154, 157, 193, 581, 1148
HpyAV CCTTC 5 cut(s) 712, 759, 774, 1018, 1082
HpyCH4III ACNGT 5 cut(s) 55, 421, 736, 802, 1063
HpyCH4IV ACGT 3 cut(s) 174, 188, 486
HpyCH4V TGCA 9 cut(s) 116, 178, 731, 742, 794, 959, 991, 1001, 1167
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 166, 175, 399, 653
HpyF3I CTNAG 4 cut(s) 48, 332, 490, 543
HpySE526I ACGT 3 cut(s) 174, 188, 486
Hsp92I GRCGYC 3 cut(s) 149, 188, 486
Hsp92II CATG 5 cut(s) 485, 587, 605, 746, 1060
HspAI GCGC 1 cut(s) 656
KroI GCCGGC 1 cut(s) 145
KroNI GCCGGC 1 cut(s) 147
Ksp22I TGATCA 2 cut(s) 469, 598
LmnI GCTCC 1 cut(s) 97
Lsp1109I GCAGC 4 cut(s) 169, 806, 985, 1013
LweI GCATC 3 cut(s) 225, 835, 946
MaeI CTAG 3 cut(s) 630, 879, 986
MaeII ACGT 3 cut(s) 174, 188, 486
MaeIII GTNAC 4 cut(s) 122, 275, 907, 968
MboII GAAGA 4 cut(s) 256, 430, 820, 992
MfeI CAATTG 2 cut(s) 789, 992
MflI RGATCY 1 cut(s) 944
MhlI GDGCHC 2 cut(s) 180, 783
MluCI AATT 8 cut(s) 404, 503, 567, 671, 789, 992, 1043, 1237
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 632
MroNI GCCGGC 1 cut(s) 145
MroXI GAANNNNTTC 2 cut(s) 65, 812
MseI TTAA 5 cut(s) 381, 618, 669, 804, 1098
MslI CAYNNNNRTG 1 cut(s) 86
MspI CCGG 6 cut(s) 74, 146, 166, 648, 698, 1129
MspR9I CCNGG 3 cut(s) 718, 1129, 1130
MunI CAATTG 2 cut(s) 789, 992
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 1 cut(s) 718
MwoI GCNNNNNNNGC 5 cut(s) 20, 166, 175, 399, 653
NaeI GCCGGC 1 cut(s) 147
NciI CCSGG 2 cut(s) 1129, 1130
NgoMIV GCCGGC 1 cut(s) 145
NlaIII CATG 5 cut(s) 485, 587, 605, 746, 1060
NlaIV GGNNCC 5 cut(s) 144, 696, 756, 859, 1141
NmeAIII GCCGAG 1 cut(s) 49
NmuCI GTSAC 3 cut(s) 122, 275, 968
PagI TCATGA 1 cut(s) 481
PcsI WCGNNNNNNNCGW 2 cut(s) 146, 158
PctI GAATGC 1 cut(s) 1121
PdiI GCCGGC 1 cut(s) 147
PdmI GAANNNNTTC 2 cut(s) 65, 812
PfeI GAWTC 4 cut(s) 328, 435, 591, 1148
PflMI CCANNNNNTGG 1 cut(s) 1045
PkrI GCNGC 6 cut(s) 159, 240, 796, 1000, 1003, 1185
Ple19I CGATCG 1 cut(s) 679
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
Ppu21I YACGTR 1 cut(s) 175
Psp6I CCWGG 1 cut(s) 716
PspGI CCWGG 1 cut(s) 716
PspN4I GGNNCC 5 cut(s) 144, 696, 756, 859, 1141
PspPI GGNCC 4 cut(s) 496, 650, 746, 755
PsrI GAACNNNNNNTAC 2 cut(s) 155, 187
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 1 cut(s) 944
PvuI CGATCG 1 cut(s) 679
RsaI GTAC 3 cut(s) 173, 323, 521
RsaNI GTAC 3 cut(s) 172, 322, 520
RseI CAYNNNNRTG 1 cut(s) 86
SalI GTCGAC 1 cut(s) 151
SaqAI TTAA 5 cut(s) 381, 618, 669, 804, 1098
SatI GCNGC 6 cut(s) 158, 239, 795, 999, 1002, 1184
Sau96I GGNCC 4 cut(s) 496, 650, 746, 755
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 3 cut(s) 718, 1129, 1130
SduI GDGCHC 2 cut(s) 180, 783
SfaNI GCATC 3 cut(s) 225, 835, 946
SfcI CTRYAG 1 cut(s) 999
SgrDI CGTCGACG 1 cut(s) 151
SinI GGWCC 2 cut(s) 650, 746
SmaI CCCGGG 1 cut(s) 1130
SmiMI CAYNNNNRTG 1 cut(s) 86
SpeI ACTAGT 1 cut(s) 985
Sse9I AATT 8 cut(s) 404, 503, 567, 671, 789, 992, 1043, 1237
SsiI CCGC 2 cut(s) 239, 1184
SspMI CTAG 3 cut(s) 630, 879, 986
StyD4I CCNGG 3 cut(s) 716, 1127, 1128
TaaI ACNGT 5 cut(s) 55, 421, 736, 802, 1063
TaiI ACGT 3 cut(s) 177, 191, 489
TaqI TCGA 3 cut(s) 152, 441, 675
TasI AATT 8 cut(s) 404, 503, 567, 671, 789, 992, 1043, 1237
TatI WGTACW 1 cut(s) 321
TauI GCSGC 2 cut(s) 241, 1186
TfiI GAWTC 4 cut(s) 328, 435, 591, 1148
Tru1I TTAA 5 cut(s) 381, 618, 669, 804, 1098
Tru9I TTAA 5 cut(s) 381, 618, 669, 804, 1098
TscAI CASTG 5 cut(s) 93, 123, 551, 741, 973
TseFI GTSAC 3 cut(s) 122, 275, 968
TseI GCWGC 4 cut(s) 157, 794, 998, 1001
Tsp45I GTSAC 3 cut(s) 122, 275, 968
TspDTI ATGAA 7 cut(s) 74, 553, 567, 756, 941, 1128, 1196
TspGWI ACGGA 2 cut(s) 210, 250
TspMI CCCGGG 1 cut(s) 1128
TspRI CASTG 5 cut(s) 93, 123, 551, 741, 973
Van91I CCANNNNNTGG 1 cut(s) 1045
VneI GTGCAC 1 cut(s) 176
VpaK11BI GGWCC 2 cut(s) 650, 746
XapI RAATTY 2 cut(s) 503, 671
XmaI CCCGGG 1 cut(s) 1128
XmiI GTMKAC 2 cut(s) 152, 573
XmnI GAANNNNTTC 2 cut(s) 65, 812
XspI CTAG 3 cut(s) 630, 879, 986
ZraI GACGTC 2 cut(s) 189, 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.