pycom07g08870

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
8083544 .. 8083729
186 bp
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UTR
Exon/CDS
Intron
pycom07g08870.1

Sequence Viewer

Length: 186 bp
ATGGGGAGTAGCCCAAGACCATATAAGCACATAGCAAACCTTGTCCCTCACCGATGTGGGACAACTCTCAACACGCCCCCGCACGTGTGGCGGATTTTCAAGCCTACACATGGACAACAACTGGGTGACGTGGAGCGCGTGTGGCCGTTTGGCTTCACACGAGGACAACCCGCTCTGATACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.9

Weight (kDa)

10.89

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022532)

Species Orthologous Gene IDs
pyrus_communis pycom02g17370 pycom07g08870 pycom11g22440 pycom17g26310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 173
AccII CGCG 1 cut(s) 138
AciI CCGC 3 cut(s) 80, 91, 171
AcoI YGGCCR 1 cut(s) 143
AcvI CACGTG 1 cut(s) 85
AfiI CCNNNNNNNGG 1 cut(s) 110
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 1 cut(s) 100
AjiI CACGTC 1 cut(s) 130
AleI CACNNNNGTG 1 cut(s) 54
AoxI GGCC 1 cut(s) 143
AspLEI GCGC 1 cut(s) 138
AsuHPI GGTGA 2 cut(s) 41, 137
BauI CACGAG 1 cut(s) 159
BbrPI CACGTG 1 cut(s) 85
BceAI ACGGC 1 cut(s) 130
BmgBI CACGTC 1 cut(s) 130
BmrI ACTGGG 1 cut(s) 131
BmuI ACTGGG 1 cut(s) 131
BsaAI YACGTR 1 cut(s) 85
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse1I ACTGG 1 cut(s) 126
BseLI CCNNNNNNNGG 1 cut(s) 110
BseNI ACTGG 1 cut(s) 126
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 1 cut(s) 145
BslFI GGGAC 2 cut(s) 29, 73
BslI CCNNNNNNNGG 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 29, 73
BsnI GGCC 1 cut(s) 145
BspACI CCGC 3 cut(s) 80, 91, 171
BspANI GGCC 1 cut(s) 145
BspFNI CGCG 1 cut(s) 138
BsrBI CCGCTC 1 cut(s) 173
BsrI ACTGG 1 cut(s) 126
BssSI CACGAG 1 cut(s) 159
Bst2BI CACGAG 1 cut(s) 159
BstBAI YACGTR 1 cut(s) 85
BstFNI CGCG 1 cut(s) 138
BstHHI GCGC 1 cut(s) 138
BstMWI GCNNNNNNNGC 2 cut(s) 88, 142
BstUI CGCG 1 cut(s) 138
BsuRI GGCC 1 cut(s) 145
BtrI CACGTC 1 cut(s) 130
CfoI GCGC 1 cut(s) 138
CviAII CATG 2 cut(s) 110, 183
CviJI RGCY 4 cut(s) 12, 103, 145, 153
CviKI_1 RGCY 4 cut(s) 12, 103, 145, 153
EaeI YGGCCR 1 cut(s) 143
EciI GGCGGA 1 cut(s) 106
Eco72I CACGTG 1 cut(s) 85
FaeI CATG 2 cut(s) 113, 186
FaiI YATR 5 cut(s) 22, 24, 32, 111, 184
FaqI GGGAC 2 cut(s) 29, 73
FatI CATG 2 cut(s) 109, 182
FauI CCCGC 2 cut(s) 87, 178
GlaI GCGC 1 cut(s) 137
HaeIII GGCC 1 cut(s) 145
HhaI GCGC 1 cut(s) 138
Hin1II CATG 2 cut(s) 113, 186
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HphI GGTGA 2 cut(s) 41, 137
Hpy188I TCNGA 1 cut(s) 177
HpyCH4IV ACGT 2 cut(s) 84, 129
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 142
HpySE526I ACGT 2 cut(s) 84, 129
Hsp92II CATG 2 cut(s) 113, 186
HspAI GCGC 1 cut(s) 136
LmnI GCTCC 1 cut(s) 133
LpnPI CCDG 1 cut(s) 107
MaeII ACGT 2 cut(s) 84, 129
MaeIII GTNAC 1 cut(s) 125
MbiI CCGCTC 1 cut(s) 173
MnlI CCTC 2 cut(s) 57, 155
MslI CAYNNNNRTG 1 cut(s) 54
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 2 cut(s) 88, 142
NlaIII CATG 2 cut(s) 113, 186
NmuCI GTSAC 1 cut(s) 125
OliI CACNNNNGTG 1 cut(s) 54
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PmaCI CACGTG 1 cut(s) 85
PmlI CACGTG 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 85
PspCI CACGTG 1 cut(s) 85
RseI CAYNNNNRTG 1 cut(s) 54
SetI ASST 3 cut(s) 42, 87, 132
SmiMI CAYNNNNRTG 1 cut(s) 54
SsiI CCGC 3 cut(s) 80, 91, 171
TaiI ACGT 2 cut(s) 87, 132
TseFI GTSAC 1 cut(s) 125
Tsp45I GTSAC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.