pycom17g26310

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
24622486 .. 24622671
186 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g26310.1

Sequence Viewer

Length: 186 bp
ATGGGGAGTAGCCCAAGACCATATAAGCACATAGCAAACCTTGTCCCTCACCGATGTGGGACAACTCTCAACACGCCCCCGCACGTGTGGCGGATTTTCAAGCCTACACGTGGACAACAACTGGATGACGTGGAGTGCGTGTGGCCGTTTGGCTTCACACGAGGACAACCCGCTCTGATACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.92

Weight (kDa)

9.84

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0022532)

Species Orthologous Gene IDs
pyrus_communis pycom02g17370 pycom07g08870 pycom11g22440 pycom17g26310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 173
AciI CCGC 3 cut(s) 80, 91, 171
AcoI YGGCCR 1 cut(s) 143
AcvI CACGTG 2 cut(s) 85, 110
AfiI CCNNNNNNNGG 1 cut(s) 110
AflIII ACRYGT 2 cut(s) 84, 107
AgsI TTSAA 1 cut(s) 100
AjiI CACGTC 1 cut(s) 130
AleI CACNNNNGTG 1 cut(s) 54
AoxI GGCC 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 41
BauI CACGAG 1 cut(s) 159
BbrPI CACGTG 2 cut(s) 85, 110
BceAI ACGGC 1 cut(s) 130
BmgBI CACGTC 1 cut(s) 130
BsaAI YACGTR 2 cut(s) 85, 110
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse1I ACTGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 130
BseLI CCNNNNNNNGG 1 cut(s) 110
BseNI ACTGG 1 cut(s) 126
BshFI GGCC 1 cut(s) 145
BslFI GGGAC 2 cut(s) 29, 73
BslI CCNNNNNNNGG 1 cut(s) 110
BsmFI GGGAC 2 cut(s) 29, 73
BsnI GGCC 1 cut(s) 145
BspACI CCGC 3 cut(s) 80, 91, 171
BspANI GGCC 1 cut(s) 145
BsrBI CCGCTC 1 cut(s) 173
BsrI ACTGG 1 cut(s) 126
BssSI CACGAG 1 cut(s) 159
Bst2BI CACGAG 1 cut(s) 159
BstBAI YACGTR 2 cut(s) 85, 110
BstF5I GGATG 1 cut(s) 130
BstMWI GCNNNNNNNGC 1 cut(s) 88
BsuRI GGCC 1 cut(s) 145
BtrI CACGTC 1 cut(s) 130
BtsCI GGATG 1 cut(s) 130
CviAII CATG 1 cut(s) 183
CviJI RGCY 4 cut(s) 12, 103, 145, 153
CviKI_1 RGCY 4 cut(s) 12, 103, 145, 153
EaeI YGGCCR 1 cut(s) 143
EciI GGCGGA 1 cut(s) 106
Eco72I CACGTG 2 cut(s) 85, 110
FaeI CATG 1 cut(s) 186
FaiI YATR 4 cut(s) 22, 24, 32, 184
FaqI GGGAC 2 cut(s) 29, 73
FatI CATG 1 cut(s) 182
FauI CCCGC 2 cut(s) 87, 178
FokI GGATG 1 cut(s) 137
HaeIII GGCC 1 cut(s) 145
Hin1II CATG 1 cut(s) 186
HphI GGTGA 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 113
Hpy188I TCNGA 1 cut(s) 177
Hpy8I GTNNAC 1 cut(s) 113
HpyCH4IV ACGT 3 cut(s) 84, 109, 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 88
HpySE526I ACGT 3 cut(s) 84, 109, 129
Hsp92II CATG 1 cut(s) 186
LpnPI CCDG 1 cut(s) 107
MaeII ACGT 3 cut(s) 84, 109, 129
MbiI CCGCTC 1 cut(s) 173
MnlI CCTC 2 cut(s) 57, 155
MslI CAYNNNNRTG 1 cut(s) 54
MwoI GCNNNNNNNGC 1 cut(s) 88
NlaIII CATG 1 cut(s) 186
OliI CACNNNNGTG 1 cut(s) 54
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PmaCI CACGTG 2 cut(s) 85, 110
PmlI CACGTG 2 cut(s) 85, 110
Ppu21I YACGTR 2 cut(s) 85, 110
PspCI CACGTG 2 cut(s) 85, 110
RseI CAYNNNNRTG 1 cut(s) 54
SetI ASST 4 cut(s) 42, 87, 112, 132
SmiMI CAYNNNNRTG 1 cut(s) 54
SsiI CCGC 3 cut(s) 80, 91, 171
TaiI ACGT 3 cut(s) 87, 112, 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.