Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0012460

Physical Location & Seq

Genomic Coordinates Reverse (-)

1304880 .. 1307144

Gene Structure 2265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g01700.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGATGTTCATACACTTCTTTTCCTTCTATCCAAAATTGTCTGCGCCAACCAAACCAACCACCAAATCCTCATCACCTTCTTCGTCCCCACCATCGTCGAACCATCTGAATCTCTCTCCGTCTCCGATCGCATTATCGCAAACCCAACGAGAGATGCAGACCCGGTTCACAGCCCTAGCGGCGCGGATCATAAAATCGACCGCCCGGTCCTTCTCCTCCTCCTCCTCCTCCTCCACCCAAACCCCGCCCTCAACCGTGACATCCTCCTCCCAATTCCCCCAAACTCTGGCGGGCCTGCGGGCCCGCCTCGCCGCCGAGTCTCCGATTCTGACGGACTTCGTGGAAGGCGAAGGCCCGTATTCCGTCGAAGTCGGAACCAAGAAGAACCCTCTCCCGAAGCCGAAATGGATGAAGGAGTCAATCCCCGGCGGCCAAAAGTACACTCAGATCAAGAAAAAGCTCAGGGAATTGAAGCTTCACACGGTGTGCGAGGAGGCGAAGTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACTGCTACCGCCACGATTATGATTCTTGGTGATACGTGTACGCGCGGTTGCAGGTTTTGCAATGTGAAGACTTCCAGGACTCCGCCACCGCCGGACCCTAATGAACCGACGAATGTGGCGGAGGCGATTGCGTCTTGGGGTTTGGATTATGTGGTGATTACTAGCGTGGACCGGGACGATTTGCCCGATCAAGGGAGCGGACATTTTGCAGAGACCGTGCAAAAGTTGAAGGTGCTCAAACCCAGCATGCTCATTGAGGCTTTGGTTCCTGATTTTCGGGGAGACTCGAGCTGTGTAGAGAAAGTTGCAACATCCGGATTGGATGTCCTTGCTCACAATATTGAGACAGTTGAAGAGCTTCAGAGGGCAGTGCGGGATCACCGTGCCAATTTTAAGCAATCTTTAGATGTTTTAATGATGGCCAAAGACCATGCTCCCGCGGGAACACTTACAAAGACTTCAATAATGTTAGGCTGCGGGGAGACACCTGATCAGGTTGTTAGGACGATGGAGAAGGTGAGAGCAGCAGGTGTTGATGTTATGACATTTGGTCAATACATGCGACCTTCAAAGCGCCACATGCCTGTGTCTGAATACATTACTCCTGAGGCCTTTGAGAGATACCGAGCTCTTGGCATGGAAATGGGATTTCGATATGTGGCATCTGGTCCCATGGTAAGGTCGTCATACAAAGCTGGCGAATACTACATCAAATCTATGATAGAATCAGACCGGGCTTCATCTTCGCATGTTTCTGCCTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006464 GO:0006520 GO:0006544 GO:0006546 GO:0006629 GO:0006631 GO:0006633 GO:0006732 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009063 GO:0009069 GO:0009071 GO:0009106 GO:0009107 GO:0009108 GO:0009249 GO:0009987 GO:0010467 GO:0016053 GO:0016054 GO:0016740 GO:0016782 GO:0016783 GO:0016992 GO:0017144 GO:0018065 GO:0018130 GO:0018193 GO:0018205 GO:0019538 GO:0019752 GO:0031974 GO:0032787 GO:0036211 GO:0042133 GO:0042135 GO:0042737 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044272 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046395 GO:0046483 GO:0051186 GO:0051188 GO:0051604 GO:0065007 GO:0065008 GO:0070013 GO:0070283 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00785 ko01100 map00785 map01100

Pfam Domains

Protein Families

LIAS_N Radical_SAM

Protein Analysis

436

Amino Acids

47.52

Weight (kDa)

8.87

Isoelectric Point (pI)

45.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20860 AT2G20860 AT2G20860
fragaria_vesca	FvH4_6g44960
malus_domestica	MD09G1091400.v1.1 MD17G1081300.v1.1
prunus_persica	Prupe.3G233600_v2.0.a1
pyrus_communis	pycom09g01700 pycom17g07960
rosa_chinensis	RchiOBHm_Chr2g0162201
rosa_laevigata	RLG00000021327
rosa_multiflora	Rmu_sc0004020.1_g000029
rosa_roxburghii	Rroxscaffold_2G00088250
rosa_rugosa	Rorug02G0495200
rosa_samantha	Rh2AG561600 Rh2BG574700 Rh2CG544900 Rh2DG584700
rosa_wichuraiana	Rw2G046510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1061
AasI	GACNNNNNNGTC	1 cut(s)	205
Acc36I	ACCTGC	2 cut(s)	585, 1061
AccB7I	CCANNNNNTGG	1 cut(s)	286
AccBSI	CCGCTC	1 cut(s)	741
AccII	CGCG	4 cut(s)	184, 586, 588, 983
AccIII	TCCGGA	1 cut(s)	857
AclWI	GGATC	2 cut(s)	194, 927
AcoI	YGGCCR	2 cut(s)	430, 963
AcuI	CTGAAG	1 cut(s)	887
AdeI	CACNNNGTG	2 cut(s)	484, 486
AfaI	GTAC	2 cut(s)	440, 583
AfiI	CCNNNNNNNGG	5 cut(s)	286, 512, 734, 735, 1221
AflIII	ACRYGT	1 cut(s)	578
AgsI	TTSAA	5 cut(s)	472, 772, 896, 1005, 1113
AhdI	GACNNNNNGTC	1 cut(s)	1092
AjnI	CCWGG	1 cut(s)	617
AluBI	AGCT	6 cut(s)	460, 475, 834, 901, 1172, 1238
AluI	AGCT	6 cut(s)	460, 475, 834, 901, 1172, 1238
Alw21I	GWGCWC	2 cut(s)	780, 1174
Alw26I	GTCTC	7 cut(s)	126, 324, 530, 749, 819, 881, 1019
AlwI	GGATC	2 cut(s)	194, 927
Ama87I	CYCGRG	1 cut(s)	829
Aor13HI	TCCGGA	1 cut(s)	857
AoxI	GGCC	6 cut(s)	292, 300, 352, 430, 963, 1152
ApaI	GGGCCC	1 cut(s)	304
ApeKI	GCWGC	2 cut(s)	1017, 1067
Asp700I	GAANNNNTTC	1 cut(s)	900
AspLEI	GCGC	4 cut(s)	46, 184, 588, 1119
AspS9I	GGNCC	9 cut(s)	207, 292, 300, 301, 353, 525, 637, 712, 1211
AsuC2I	CCSGG	5 cut(s)	163, 205, 426, 716, 1277
AsuHPI	GGTGA	5 cut(s)	66, 584, 709, 914, 1072
AvaI	CYCGRG	1 cut(s)	829
AvaII	GGWCC	5 cut(s)	207, 525, 637, 712, 1211
AxyI	CCTNAGG	1 cut(s)	1149
BaeGI	GKGCMC	2 cut(s)	304, 506
BalI	TGGCCA	1 cut(s)	965
BanII	GRGCYC	2 cut(s)	304, 1174
BauI	CACGAG	1 cut(s)	1303
BbsI	GAAGAC	1 cut(s)	617
Bbv12I	GWGCWC	2 cut(s)	780, 1174
BbvI	GCAGC	2 cut(s)	1004, 1079
BccI	CCATC	4 cut(s)	100, 111, 955, 1045
BciT130I	CCWGG	1 cut(s)	619
BclI	TGATCA	1 cut(s)	1033
BcnI	CCSGG	5 cut(s)	163, 205, 426, 716, 1277
BcoDI	GTCTC	7 cut(s)	126, 324, 530, 749, 819, 881, 1019
BfaI	CTAG	2 cut(s)	176, 705
BfoI	RGCGCY	1 cut(s)	1120
BfuAI	ACCTGC	2 cut(s)	585, 1061
BglI	GCCNNNNNGGC	1 cut(s)	179
BisI	GCNGC	6 cut(s)	180, 312, 430, 532, 1018, 1068
BlsI	GCNGC	6 cut(s)	181, 313, 431, 533, 1019, 1069
Bme1390I	CCNGG	6 cut(s)	163, 205, 426, 619, 716, 1277
Bme18I	GGWCC	5 cut(s)	207, 525, 637, 712, 1211
BmeRI	GACNNNNNGTC	1 cut(s)	1092
BmeT110I	CYCGRG	1 cut(s)	829
BmgT120I	GGNCC	9 cut(s)	207, 292, 300, 301, 353, 525, 637, 712, 1211
BmiI	GGNNCC	5 cut(s)	302, 376, 639, 810, 1213
BmrFI	CCNGG	6 cut(s)	163, 205, 426, 619, 716, 1277
BmsI	GCATC	2 cut(s)	144, 1214
BpiI	GAAGAC	1 cut(s)	617
Bpu10I	CCTNAGC	1 cut(s)	461
BpuMI	CCSGG	5 cut(s)	163, 205, 426, 716, 1277
BsaAI	YACGTR	1 cut(s)	579
BsaI	GGTCTC	2 cut(s)	530, 749
BsaJI	CCNNGG	4 cut(s)	424, 511, 981, 1215
BsaWI	WCCGGW	1 cut(s)	857
BsaXI	ACNNNNNCTCC	2 cut(s)	485, 515
Bsc4I	CCNNNNNNNGG	5 cut(s)	286, 512, 734, 735, 1221
Bse118I	RCCGGY	1 cut(s)	539
Bse21I	CCTNAGG	1 cut(s)	1149
Bse3DI	GCAATG	1 cut(s)	610
BseAI	TCCGGA	1 cut(s)	857
BseBI	CCWGG	1 cut(s)	619
BseDI	CCNNGG	4 cut(s)	424, 511, 981, 1215
BseGI	GGATG	4 cut(s)	260, 414, 854, 871
BseLI	CCNNNNNNNGG	5 cut(s)	286, 512, 734, 735, 1221
BseMI	GCAATG	1 cut(s)	610
BseMII	CTCAG	3 cut(s)	458, 475, 1140
BseRI	GAGGAG	8 cut(s)	205, 208, 211, 214, 217, 220, 256, 506
BseSI	GKGCMC	2 cut(s)	304, 506
BseXI	GCAGC	2 cut(s)	1004, 1079
BseYI	CCCAGC	1 cut(s)	785
Bsh1236I	CGCG	4 cut(s)	184, 586, 588, 983
Bsh1285I	CGRYCG	2 cut(s)	129, 201
BshFI	GGCC	6 cut(s)	294, 302, 354, 432, 965, 1154
BsiEI	CGRYCG	2 cut(s)	129, 201
BsiHKAI	GWGCWC	2 cut(s)	780, 1174
BsiHKCI	CYCGRG	1 cut(s)	829
BsiSI	CCGG	9 cut(s)	163, 205, 426, 528, 540, 635, 715, 858, 1276
BslFI	GGGAC	3 cut(s)	70, 731, 1197
BslI	CCNNNNNNNGG	5 cut(s)	286, 512, 734, 735, 1221
BsmAI	GTCTC	7 cut(s)	126, 324, 530, 749, 819, 881, 1019
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	3 cut(s)	70, 731, 1197
BsnI	GGCC	6 cut(s)	294, 302, 354, 432, 965, 1154
Bso31I	GGTCTC	2 cut(s)	530, 749
BsoBI	CYCGRG	1 cut(s)	829
Bsp120I	GGGCCC	1 cut(s)	300
Bsp1286I	GDGCHC	4 cut(s)	304, 506, 780, 1174
Bsp13I	TCCGGA	1 cut(s)	857
Bsp143I	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
Bsp19I	CCATGG	1 cut(s)	1215
BspANI	GGCC	6 cut(s)	294, 302, 354, 432, 965, 1154
BspCNI	CTCAG	3 cut(s)	457, 474, 1141
BspEI	TCCGGA	1 cut(s)	857
BspFNI	CGCG	4 cut(s)	184, 586, 588, 983
BspLI	GGNNCC	5 cut(s)	302, 376, 639, 810, 1213
BspMI	ACCTGC	2 cut(s)	585, 1061
BspPI	GGATC	2 cut(s)	194, 927
BspQI	GCTCTTC	1 cut(s)	891
BspTNI	GGTCTC	2 cut(s)	530, 749
BsrBI	CCGCTC	1 cut(s)	741
BsrDI	GCAATG	1 cut(s)	610
BsrFI	RCCGGY	1 cut(s)	539
BssAI	RCCGGY	1 cut(s)	539
BssECI	CCNNGG	4 cut(s)	424, 511, 981, 1215
BssMI	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
BssSI	CACGAG	1 cut(s)	1303
BssT1I	CCWWGG	1 cut(s)	1215
Bst2BI	CACGAG	1 cut(s)	1303
Bst2UI	CCWGG	1 cut(s)	619
Bst4CI	ACNGT	5 cut(s)	256, 484, 760, 892, 926
Bst6I	CTCTTC	1 cut(s)	891
BstAPI	GCANNNNNTGC	1 cut(s)	600
BstBAI	YACGTR	1 cut(s)	579
BstC8I	GCNNGC	6 cut(s)	292, 296, 300, 304, 791, 1240
BstDEI	CTNAG	3 cut(s)	444, 461, 1149
BstDSI	CCRYGG	2 cut(s)	981, 1215
BstF5I	GGATG	4 cut(s)	260, 414, 854, 871
BstFNI	CGCG	4 cut(s)	184, 586, 588, 983
BstH2I	RGCGCY	1 cut(s)	1120
BstHHI	GCGC	4 cut(s)	46, 184, 588, 1119
BstKTI	GATC	6 cut(s)	129, 189, 450, 733, 922, 1036
BstMAI	GTCTC	7 cut(s)	126, 324, 530, 749, 819, 881, 1019
BstMBI	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
BstMCI	CGRYCG	2 cut(s)	129, 201
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 308, 528, 540, 600, 1123
BstNI	CCWGG	1 cut(s)	619
BstNSI	RCATGY	4 cut(s)	793, 1105, 1126, 1295
BstSCI	CCNGG	6 cut(s)	161, 203, 424, 617, 714, 1275
BstSLI	GKGCMC	2 cut(s)	304, 506
BstUI	CGCG	4 cut(s)	184, 586, 588, 983
BstV1I	GCAGC	2 cut(s)	1004, 1079
BstV2I	GAAGAC	1 cut(s)	617
Bsu36I	CCTNAGG	1 cut(s)	1149
BsuRI	GGCC	6 cut(s)	294, 302, 354, 432, 965, 1154
BtgI	CCRYGG	2 cut(s)	981, 1215
BtsCI	GGATG	4 cut(s)	260, 414, 854, 871
BtsI	GCAGTG	2 cut(s)	543, 918
BtsIMutI	CAGTG	2 cut(s)	543, 918
BveI	ACCTGC	2 cut(s)	585, 1061
Cac8I	GCNNGC	6 cut(s)	292, 296, 300, 304, 791, 1240
CfoI	GCGC	4 cut(s)	46, 184, 588, 1119
Cfr10I	RCCGGY	1 cut(s)	539
Cfr13I	GGNCC	9 cut(s)	207, 292, 300, 301, 353, 525, 637, 712, 1211
Cfr42I	CCGCGG	1 cut(s)	984
CseI	GACGC	1 cut(s)	663
Csp6I	GTAC	2 cut(s)	439, 582
CviAII	CATG	7 cut(s)	790, 974, 1102, 1123, 1180, 1216, 1292
CviQI	GTAC	2 cut(s)	439, 582
DdeI	CTNAG	3 cut(s)	444, 461, 1149
DpnI	GATC	6 cut(s)	128, 188, 449, 732, 921, 1035
DpnII	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
DraIII	CACNNNGTG	2 cut(s)	484, 486
DrdI	GACNNNNNNGTC	1 cut(s)	205
DriI	GACNNNNNGTC	1 cut(s)	1092
DseDI	GACNNNNNNGTC	1 cut(s)	205
EaeI	YGGCCR	2 cut(s)	430, 963
Eam1104I	CTCTTC	1 cut(s)	891
Eam1105I	GACNNNNNGTC	1 cut(s)	1092
EarI	CTCTTC	1 cut(s)	891
EciI	GGCGGA	2 cut(s)	615, 677
Ecl136II	GAGCTC	1 cut(s)	1172
Eco130I	CCWWGG	1 cut(s)	1215
Eco147I	AGGCCT	1 cut(s)	1154
Eco24I	GRGCYC	2 cut(s)	304, 1174
Eco31I	GGTCTC	2 cut(s)	530, 749
Eco47I	GGWCC	5 cut(s)	207, 525, 637, 712, 1211
Eco53kI	GAGCTC	1 cut(s)	1172
Eco57I	CTGAAG	1 cut(s)	887
Eco81I	CCTNAGG	1 cut(s)	1149
Eco88I	CYCGRG	1 cut(s)	829
EcoICRI	GAGCTC	1 cut(s)	1172
EcoRII	CCWGG	1 cut(s)	617
EcoT14I	CCWWGG	1 cut(s)	1215
EcoT38I	GRGCYC	2 cut(s)	304, 1174
ErhI	CCWWGG	1 cut(s)	1215
Esp3I	CGTCTC	1 cut(s)	126
FaeI	CATG	7 cut(s)	793, 977, 1105, 1126, 1183, 1219, 1295
FaqI	GGGAC	3 cut(s)	70, 731, 1197
FatI	CATG	7 cut(s)	789, 973, 1101, 1122, 1179, 1215, 1291
FauI	CCCGC	8 cut(s)	252, 283, 291, 311, 909, 976, 988, 1013
FbaI	TGATCA	1 cut(s)	1033
Fnu4HI	GCNGC	6 cut(s)	180, 312, 430, 532, 1018, 1068
FokI	GGATG	4 cut(s)	247, 421, 841, 878
FriOI	GRGCYC	2 cut(s)	304, 1174
Fsp4HI	GCNGC	6 cut(s)	180, 312, 430, 532, 1018, 1068
FspBI	CTAG	2 cut(s)	176, 705
GlaI	GCGC	4 cut(s)	45, 183, 587, 1118
GluI	GCNGC	6 cut(s)	180, 312, 430, 532, 1018, 1068
GsaI	CCCAGC	1 cut(s)	789
HaeII	RGCGCY	1 cut(s)	1120
HaeIII	GGCC	6 cut(s)	294, 302, 354, 432, 965, 1154
HapII	CCGG	9 cut(s)	163, 205, 426, 528, 540, 635, 715, 858, 1276
HgaI	GACGC	1 cut(s)	663
HhaI	GCGC	4 cut(s)	46, 184, 588, 1119
Hin1II	CATG	7 cut(s)	793, 977, 1105, 1126, 1183, 1219, 1295
Hin6I	GCGC	4 cut(s)	44, 182, 586, 1117
HinP1I	GCGC	4 cut(s)	44, 182, 586, 1117
HindIII	AAGCTT	1 cut(s)	473
HinfI	GANTC	8 cut(s)	109, 317, 325, 416, 565, 622, 827, 1268
HpaII	CCGG	9 cut(s)	163, 205, 426, 528, 540, 635, 715, 858, 1276
HphI	GGTGA	5 cut(s)	66, 584, 709, 914, 1072
Hpy166II	GTNNAC	4 cut(s)	168, 441, 582, 712
Hpy188I	TCNGA	9 cut(s)	108, 126, 324, 330, 374, 447, 906, 1135, 1273
Hpy188III	TCNNGA	6 cut(s)	394, 451, 812, 858, 1148, 1305
Hpy8I	GTNNAC	4 cut(s)	168, 441, 582, 712
Hpy99I	CGWCG	3 cut(s)	100, 368, 655
HpyAV	CCTTC	9 cut(s)	34, 87, 220, 338, 344, 406, 766, 1051, 1119
HpyCH4III	ACNGT	5 cut(s)	256, 484, 760, 892, 926
HpyCH4IV	ACGT	1 cut(s)	578
HpyCH4V	TGCA	6 cut(s)	157, 594, 603, 752, 763, 851
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 308, 528, 540, 600, 1123
HpyF3I	CTNAG	3 cut(s)	444, 461, 1149
HpySE526I	ACGT	1 cut(s)	578
Hsp92II	CATG	7 cut(s)	793, 977, 1105, 1126, 1183, 1219, 1295
HspAI	GCGC	4 cut(s)	44, 182, 586, 1117
Kpn2I	TCCGGA	1 cut(s)	857
Ksp22I	TGATCA	1 cut(s)	1033
KspI	CCGCGG	1 cut(s)	984
Kzo9I	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
LguI	GCTCTTC	1 cut(s)	891
LmnI	GCTCC	2 cut(s)	738, 982
Lsp1109I	GCAGC	2 cut(s)	1004, 1079
LweI	GCATC	2 cut(s)	144, 1214
MaeI	CTAG	2 cut(s)	176, 705
MaeII	ACGT	1 cut(s)	578
MaeIII	GTNAC	1 cut(s)	256
MalI	GATC	6 cut(s)	128, 188, 449, 732, 921, 1035
MbiI	CCGCTC	1 cut(s)	741
MboI	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
MboII	GAAGA	5 cut(s)	72, 394, 622, 908, 1278
MhlI	GDGCHC	4 cut(s)	304, 506, 780, 1174
MlsI	TGGCCA	1 cut(s)	965
MluCI	AATT	4 cut(s)	35, 272, 467, 931
MluNI	TGGCCA	1 cut(s)	965
MlyI	GAGTC	4 cut(s)	326, 425, 616, 821
MmeI	TCCRAC	1 cut(s)	352
Mox20I	TGGCCA	1 cut(s)	965
MroI	TCCGGA	1 cut(s)	857
MroXI	GAANNNNTTC	1 cut(s)	900
MscI	TGGCCA	1 cut(s)	965
MseI	TTAA	2 cut(s)	936, 956
MslI	CAYNNNNRTG	3 cut(s)	560, 1127, 1184
Msp20I	TGGCCA	1 cut(s)	965
MspA1I	CMGCKG	1 cut(s)	983
MspI	CCGG	9 cut(s)	163, 205, 426, 528, 540, 635, 715, 858, 1276
MspR9I	CCNGG	6 cut(s)	163, 205, 426, 619, 716, 1277
MvaI	CCWGG	1 cut(s)	619
MvnI	CGCG	4 cut(s)	184, 586, 588, 983
MwoI	GCNNNNNNNGC	6 cut(s)	179, 308, 528, 540, 600, 1123
NciI	CCSGG	5 cut(s)	163, 205, 426, 716, 1277
NcoI	CCATGG	1 cut(s)	1215
NdeII	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
NlaIII	CATG	7 cut(s)	793, 977, 1105, 1126, 1183, 1219, 1295
NlaIV	GGNNCC	5 cut(s)	302, 376, 639, 810, 1213
NmeAIII	GCCGAG	2 cut(s)	340, 492
NmuCI	GTSAC	1 cut(s)	256
NspI	RCATGY	4 cut(s)	793, 1105, 1126, 1295
PaeI	GCATGC	1 cut(s)	793
PaeR7I	CTCGAG	1 cut(s)	829
PaqCI	CACCTGC	1 cut(s)	1061
PceI	AGGCCT	1 cut(s)	1154
PciSI	GCTCTTC	1 cut(s)	891
PcsI	WCGNNNNNNNCGW	2 cut(s)	345, 726
PdmI	GAANNNNTTC	1 cut(s)	900
PfeI	GAWTC	4 cut(s)	109, 325, 565, 1268
PflMI	CCANNNNNTGG	1 cut(s)	286
PfoI	TCCNGGA	1 cut(s)	617
PkrI	GCNGC	6 cut(s)	181, 313, 431, 533, 1019, 1069
Ple19I	CGATCG	1 cut(s)	129
PleI	GAGTC	4 cut(s)	325, 424, 616, 821
PpsI	GAGTC	4 cut(s)	325, 424, 616, 821
Ppu21I	YACGTR	1 cut(s)	579
Psp124BI	GAGCTC	1 cut(s)	1174
Psp6I	CCWGG	1 cut(s)	617
PspFI	CCCAGC	1 cut(s)	785
PspGI	CCWGG	1 cut(s)	617
PspN4I	GGNNCC	5 cut(s)	302, 376, 639, 810, 1213
PspOMI	GGGCCC	1 cut(s)	300
PspPI	GGNCC	9 cut(s)	207, 292, 300, 301, 353, 525, 637, 712, 1211
PspXI	VCTCGAGB	1 cut(s)	829
PvuI	CGATCG	1 cut(s)	129
RsaI	GTAC	2 cut(s)	440, 583
RsaNI	GTAC	2 cut(s)	439, 582
RseI	CAYNNNNRTG	3 cut(s)	560, 1127, 1184
SacI	GAGCTC	1 cut(s)	1174
SacII	CCGCGG	1 cut(s)	984
SapI	GCTCTTC	1 cut(s)	891
SaqAI	TTAA	2 cut(s)	936, 956
SatI	GCNGC	6 cut(s)	180, 312, 430, 532, 1018, 1068
Sau3AI	GATC	6 cut(s)	126, 186, 447, 730, 919, 1033
Sau96I	GGNCC	9 cut(s)	207, 292, 300, 301, 353, 525, 637, 712, 1211
SchI	GAGTC	4 cut(s)	326, 425, 616, 821
ScrFI	CCNGG	6 cut(s)	163, 205, 426, 619, 716, 1277
SduI	GDGCHC	4 cut(s)	304, 506, 780, 1174
SfaNI	GCATC	2 cut(s)	144, 1214
Sfr274I	CTCGAG	1 cut(s)	829
Sfr303I	CCGCGG	1 cut(s)	984
SgrBI	CCGCGG	1 cut(s)	984
SinI	GGWCC	5 cut(s)	207, 525, 637, 712, 1211
SlaI	CTCGAG	1 cut(s)	829
SmiMI	CAYNNNNRTG	3 cut(s)	560, 1127, 1184
SmlI	CTYRAG	1 cut(s)	829
SmoI	CTYRAG	1 cut(s)	829
SphI	GCATGC	1 cut(s)	793
Sse9I	AATT	4 cut(s)	35, 272, 467, 931
SseBI	AGGCCT	1 cut(s)	1154
SspI	AATATT	1 cut(s)	883
SspMI	CTAG	2 cut(s)	176, 705
SstI	GAGCTC	1 cut(s)	1174
StuI	AGGCCT	1 cut(s)	1154
StyD4I	CCNGG	6 cut(s)	161, 203, 424, 617, 714, 1275
StyI	CCWWGG	1 cut(s)	1215
TaaI	ACNGT	5 cut(s)	256, 484, 760, 892, 926
TaiI	ACGT	1 cut(s)	581
TaqI	TCGA	5 cut(s)	98, 197, 366, 830, 1195
TasI	AATT	4 cut(s)	35, 272, 467, 931
TatI	WGTACW	1 cut(s)	438
TauI	GCSGC	4 cut(s)	182, 314, 432, 534
TfiI	GAWTC	4 cut(s)	109, 325, 565, 1268
Tru1I	TTAA	2 cut(s)	936, 956
Tru9I	TTAA	2 cut(s)	936, 956
TscAI	CASTG	2 cut(s)	550, 918
TseFI	GTSAC	1 cut(s)	256
TseI	GCWGC	2 cut(s)	1017, 1067
Tsp45I	GTSAC	1 cut(s)	256
TspDTI	ATGAA	3 cut(s)	425, 660, 1272
TspGWI	ACGGA	3 cut(s)	108, 347, 352
TspRI	CASTG	2 cut(s)	550, 918
Van91I	CCANNNNNTGG	1 cut(s)	286
VpaK11BI	GGWCC	5 cut(s)	207, 525, 637, 712, 1211
XceI	RCATGY	4 cut(s)	793, 1105, 1126, 1295
XhoI	CTCGAG	1 cut(s)	829
XmnI	GAANNNNTTC	1 cut(s)	900
XspI	CTAG	2 cut(s)	176, 705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.