pycom09g18800

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0019596
Physical Location & Seq
Forward (+)
19548578 .. 19552263
3686 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2460 bp
ATGTGCAAAGATGAAATCCAATGTGATCTTTGGATTTTAGGGTTGAGGGCTTTAATATCCCTGCATCGCCATCCTAGACCACTTAATAATTTGGGGAGTTTCAGACAGGTGCAAAGTTGTCTAAATAGTCCGGCAGGTCTTTTTAGGAGAAGGCAAACTCTTGGAATAGTGGATGATGGCAACGAGTTCTCCCAGGTGAGAAGCGTATGCAGGAGTCCTACTTTAACACCTTCTGAGAGGTGTATTTCTGATGGCATATCTTTTTCTTCTGATAGCTTTTTTTCGTCGGAATCAGTCCTATCAAATATGCAAAATGTAATGGACATCTCAGTTCCAGATTCTCCATATATTGGATCAGATTATCTCAAGAGGAGGCGAATATATTCTGATGCCGACTGTGAACCTCCCAGGTTTGTTTCCTATACCTATGGAACCTCAAGAATTGAAAAGGACAATATTTTGAAAGATGTCATGATCTGGGGTGAAAGTATTGGAGGGAATGTAAGTGGATTGCAAGCAGATTCTTTACTGCCTAAGTTATTAGAAACAACTATGACGATGGATGTACAGAATATATCTTTAGGAGGGAAGCATGCTGCAGTAGTTACGAAGCAGGGGGAAGTGTTCTGTTGGGGTCACGCTAATGGGGGAAGACTAGGGCACAAAATCAATATGGATGTGATCAACCCTAAACCTGTTGATTCCCTTAATGGGATTCAGGTGAAATCTGTTTCGTGTGGTGAATATCAAACATGCGCTCTGACACATTGTGGTGAGCTCTATACATGGGGAGACACAAGTTGCGGTGCCAGTTTAGAGGCCGAGGAGAAGAGTTTCAGTCAGTGGTTACCGCATAAACTTTCTGTTCCGTTGAATAAAATAAATGTATCATATGTCGCTTGTGGGGAATGGCATACAGCTATGGTGTCCACTTCTGGGAATTTATTTACATATGGAGACGGAACCTTTGGGGTACTGGGGCATGGAAATCTTGATAGTGTTTATCAACCAAAGCAAGTTGAATCTCTCAAGGGTTTATGGGTAAAATCTGCTTCGTGTGGATCATGGCACATGGCTGCTGTAGTTGAAATCATGGTTGATTGTCTCAGGTCCAATTCAATTGGTGGGAAGTTGTTTACATGGGGTGATGGGGATAAAGGGAGGCTAGGACATGTGGATCATGAGAAGAAGCTTTTACCAACTTGCGTTGGGCAGCTTGTGGATCATGATTTTGTTCAAGTTTGTTGTGGAAGAATGTTGACTGTTGGGCTTACCAATAAAGGTACAGTTTATACAATTGGAAGTTCAGTACATGGGCAGTTAGGGAATGCTCAAGCCAAGGATAAATCAATCACATTGGTCGAAGGGAAGCTTAAAGAAGAGTCTGTTAGAGAAATAGCATCCGGTTCATATCATATAGCTGTTTTGACAGCCAGAGGAAATGTTTATACCTGGGGAAAGGGGACTAATGGACAGTTGGGATTAGGTGATATCAACGATCGTAGCACACCAACTTTTGTGGAGGCTTTGAGAGACAGGCAGGTAGAAAGTGTTGTTTGTGGATCAAATTCAACAGCTGCAATCTGCTTTCACAAATCTATTTCTGTCAGCGACCAGTCAGTTTGTTATCGATGCAACCTGCCGTTTGGGTTTACTAGGAAGAAGCACAACTGCTACAATTGCGGTCTTCTATTCTGCCATTCTTGTAGCAGTAAGAGGGCTATGGATTCTTCGCTGGCATCCAAGAAAGGCAAGGCTTTTCGAGTCTGTGATTCATGCTTTAGCAATCTGCAGAAACTTACACATTTGTGTAGATCATTCAAGCAAGAAAATCATAGTAGCATGAAGCTATTGACAGAAGAAAAGTCAGTCCCAGATGGGAAAGAAGAAAAGCCTGGAGAAACACCTAAGTACGGTCATCTATTATCTATCAAACAGGCTTGTTACAAGAAACGCCAGTCTCGTGTGAGGACCACCACCATGAAAAACCAAGAAGGAAACCAGCAGCATCTAGAACCGGCTTCTTCATCCTTGAGCGAAGAGCCACGATGGGGCCAAGTCTCATGCCCTGATCTATTTAAACCGTATTATAGAGAAAATTATACAGCACTTAACTCTCTGTCAAAAGATCATTTATCTTCTGTCGTCCCAGTGCATTCAGAATCCACAATGTCCGGTGCCACTAATGCAGAGAAATGCATATCCATGTCAGATGAGATGCTTGTTGAAGAAAGTCAGCGGCTGACAGTTGAGCTTAAAACTAAAACTATTTCAGAAAAGGCGTCTGCTGGAAAGCAACCAAACAATGGAATAGATACAAAACTTCCTCAACTCACGCCACTAAATACAAATACACCACTTCCTGAAGTAGATAGTGTATCGGATTCGCCTGCTGTGTTGTCTGATATGCCGAAGTCAGAACCCCATGGTAGGGAAACTAAATCGGCAAAGCTTGAATGA

Protein Analysis

820

Amino Acids

89.88

Weight (kDa)

7.97

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 156 - 526 1e-73 RCC1-like domain
RCC1 PF00415 205 - 254 7.4e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 312 - 361 1.1e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 376 - 423 4.7e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 463 - 492 1.9e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 480 - 528 1.4e-15 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 537 - 599 6.6e-14 FYVE zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0019596)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65920 AT1G65920
malus_domestica MD09G1279800.v1.1
prunus_persica Prupe.3G014600_v2.0.a1 Prupe.3G014600_v2.0.a1 Prupe.3G014600_v2.0.a1
pyrus_communis pycom09g18800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 125, 1531, 1647
AccB1I GGYRCC 2 cut(s) 806, 2177
AccB7I CCANNNNNTGG 2 cut(s) 350, 2306
AciI CCGC 4 cut(s) 804, 851, 1683, 2239
AclWI GGATC 5 cut(s) 361, 1069, 1185, 1230, 1570
AcsI RAATTY 2 cut(s) 940, 1567
AcuI CTGAAG 1 cut(s) 2385
AcyI GRCGYC 1 cut(s) 2282
AdeI CACNNNGTG 1 cut(s) 770
AfaI GTAC 5 cut(s) 567, 975, 1285, 1311, 1913
AfiI CCNNNNNNNGG 8 cut(s) 350, 711, 936, 1913, 2051, 2306, 2430, 2431
AflIII ACRYGT 1 cut(s) 1171
AjnI CCWGG 4 cut(s) 192, 407, 1451, 1894
AleI CACNNNNGTG 1 cut(s) 1807
Alw21I GWGCWC 1 cut(s) 780
Alw26I GTCTC 6 cut(s) 786, 951, 1109, 1527, 1965, 2065
AlwI GGATC 5 cut(s) 361, 1069, 1185, 1230, 1570
AlwNI CAGNNNCTG 1 cut(s) 2242
AoxI GGCC 2 cut(s) 819, 2053
ApeKI GCWGC 5 cut(s) 596, 1076, 1213, 1577, 2005
ApoI RAATTY 2 cut(s) 940, 1567
ArsI GACNNNNNNTTYG 2 cut(s) 950, 982
Asp700I GAANNNNTTC 2 cut(s) 382, 833
AspLEI GCGC 1 cut(s) 758
AspS9I GGNCC 3 cut(s) 1110, 1971, 2053
AsuHPI GGTGA 7 cut(s) 208, 494, 733, 752, 785, 1157, 1499
AvaII GGWCC 2 cut(s) 1110, 1971
BaeGI GKGCMC 1 cut(s) 663
BanI GGYRCC 2 cut(s) 806, 2177
BanII GRGCYC 1 cut(s) 780
BauI CACGAG 1 cut(s) 1962
BbsI GAAGAC 2 cut(s) 658, 1679
Bbv12I GWGCWC 1 cut(s) 780
BbvI GCAGC 5 cut(s) 583, 1063, 1225, 1564, 2017
BccI CCATC 7 cut(s) 78, 170, 245, 553, 1142, 1871, 2043
BceAI ACGGC 1 cut(s) 1627
BciT130I CCWGG 4 cut(s) 194, 409, 1453, 1896
BclI TGATCA 1 cut(s) 681
BcoDI GTCTC 6 cut(s) 786, 951, 1109, 1527, 1965, 2065
BfaI CTAG 5 cut(s) 75, 656, 1166, 1656, 2012
BfmI CTRYAG 3 cut(s) 597, 1080, 1790
BfuAI ACCTGC 3 cut(s) 125, 1531, 1647
BisI GCNGC 6 cut(s) 597, 1077, 1214, 1578, 2006, 2240
BlsI GCNGC 6 cut(s) 598, 1078, 1215, 1579, 2007, 2241
Bme1390I CCNGG 4 cut(s) 194, 409, 1453, 1896
Bme18I GGWCC 2 cut(s) 1110, 1971
BmgT120I GGNCC 3 cut(s) 1110, 1971, 2053
BmiI GGNNCC 5 cut(s) 433, 808, 964, 2054, 2179
BmrFI CCNGG 4 cut(s) 194, 409, 1453, 1896
BmrI ACTGGG 2 cut(s) 986, 2144
BmsI GCATC 7 cut(s) 73, 379, 1409, 1622, 1748, 2017, 2208
BmuI ACTGGG 2 cut(s) 986, 2144
BpiI GAAGAC 2 cut(s) 658, 1679
BpmI CTGGAG 1 cut(s) 1917
BpuEI CTTGAG 5 cut(s) 350, 421, 1013, 1317, 2053
Bsa29I ATCGAT 1 cut(s) 1630
BsaHI GRCGYC 1 cut(s) 2282
BsaJI CCNNGG 6 cut(s) 192, 407, 822, 1338, 1452, 2425
BsaWI WCCGGW 2 cut(s) 1403, 2174
BsaXI ACNNNNNCTCC 4 cut(s) 173, 203, 486, 516
Bsc4I CCNNNNNNNGG 8 cut(s) 350, 711, 936, 1913, 2051, 2306, 2430, 2431
Bse118I RCCGGY 1 cut(s) 2017
Bse1I ACTGG 5 cut(s) 810, 981, 1615, 1957, 2150
BseBI CCWGG 4 cut(s) 194, 409, 1453, 1896
BseCI ATCGAT 1 cut(s) 1630
BseDI CCNNGG 6 cut(s) 192, 407, 822, 1338, 1452, 2425
BseGI GGATG 7 cut(s) 70, 178, 568, 682, 1400, 1739, 2027
BseLI CCNNNNNNNGG 8 cut(s) 350, 711, 936, 1913, 2051, 2306, 2430, 2431
BseMII CTCAG 3 cut(s) 225, 342, 1120
BseNI ACTGG 5 cut(s) 810, 981, 1615, 1957, 2150
BseRI GAGGAG 2 cut(s) 385, 839
BseSI GKGCMC 1 cut(s) 663
BseXI GCAGC 5 cut(s) 583, 1063, 1225, 1564, 2017
Bsh1285I CGRYCG 1 cut(s) 1501
BshFI GGCC 2 cut(s) 821, 2055
BshNI GGYRCC 2 cut(s) 806, 2177
BshVI ATCGAT 1 cut(s) 1630
BsiEI CGRYCG 1 cut(s) 1501
BsiHKAI GWGCWC 1 cut(s) 780
BsiSI CCGG 4 cut(s) 131, 1404, 2018, 2175
BslFI GGGAC 3 cut(s) 1477, 1856, 2132
BslI CCNNNNNNNGG 8 cut(s) 350, 711, 936, 1913, 2051, 2306, 2430, 2431
BsmAI GTCTC 6 cut(s) 786, 951, 1109, 1527, 1965, 2065
BsmBI CGTCTC 1 cut(s) 951
BsmFI GGGAC 3 cut(s) 1477, 1856, 2132
BsmI GAATGC 2 cut(s) 1333, 2155
BsnI GGCC 2 cut(s) 821, 2055
Bsp1286I GDGCHC 2 cut(s) 663, 780
Bsp1407I TGTACA 1 cut(s) 565
Bsp19I CCATGG 1 cut(s) 2425
BspACI CCGC 4 cut(s) 804, 851, 1683, 2239
BspANI GGCC 2 cut(s) 821, 2055
BspCNI CTCAG 3 cut(s) 226, 341, 1119
BspDI ATCGAT 1 cut(s) 1630
BspHI TCATGA 3 cut(s) 471, 1180, 1225
BspLI GGNNCC 5 cut(s) 433, 808, 964, 2054, 2179
BspMAI CTGCAG 2 cut(s) 601, 1794
BspMI ACCTGC 3 cut(s) 125, 1531, 1647
BspPI GGATC 5 cut(s) 361, 1069, 1185, 1230, 1570
BspQI GCTCTTC 1 cut(s) 2034
BspT107I GGYRCC 2 cut(s) 806, 2177
BsrFI RCCGGY 1 cut(s) 2017
BsrGI TGTACA 1 cut(s) 565
BsrI ACTGG 5 cut(s) 810, 981, 1615, 1957, 2150
BssAI RCCGGY 1 cut(s) 2017
BssECI CCNNGG 6 cut(s) 192, 407, 822, 1338, 1452, 2425
BssNI GRCGYC 1 cut(s) 2282
BssSI CACGAG 1 cut(s) 1962
BssT1I CCWWGG 2 cut(s) 1338, 2425
Bst2BI CACGAG 1 cut(s) 1962
Bst2UI CCWGG 4 cut(s) 194, 409, 1453, 1896
Bst4CI ACNGT 7 cut(s) 398, 1264, 1288, 1476, 1916, 2085, 2248
Bst6I CTCTTC 3 cut(s) 824, 1374, 2034
BstACI GRCGYC 1 cut(s) 2282
BstAUI TGTACA 1 cut(s) 565
BstC8I GCNNGC 4 cut(s) 516, 594, 1737, 2391
BstDEI CTNAG 5 cut(s) 234, 328, 534, 1106, 1908
BstDSI CCRYGG 1 cut(s) 2425
BstEII GGTNACC 1 cut(s) 846
BstF5I GGATG 7 cut(s) 70, 178, 568, 682, 1400, 1739, 2027
BstHHI GCGC 1 cut(s) 758
BstMAI GTCTC 6 cut(s) 786, 951, 1109, 1527, 1965, 2065
BstMCI CGRYCG 1 cut(s) 1501
BstMWI GCNNNNNNNGC 2 cut(s) 1680, 2186
BstNI CCWGG 4 cut(s) 194, 409, 1453, 1896
BstNSI RCATGY 3 cut(s) 596, 756, 1175
BstPI GGTNACC 1 cut(s) 846
BstSCI CCNGG 4 cut(s) 192, 407, 1451, 1894
BstSFI CTRYAG 3 cut(s) 597, 1080, 1790
BstSLI GKGCMC 1 cut(s) 663
BstV1I GCAGC 5 cut(s) 583, 1063, 1225, 1564, 2017
BstV2I GAAGAC 2 cut(s) 658, 1679
Bsu15I ATCGAT 1 cut(s) 1630
BsuRI GGCC 2 cut(s) 821, 2055
BsuTUI ATCGAT 1 cut(s) 1630
BtgI CCRYGG 1 cut(s) 2425
BtgZI GCGATG 1 cut(s) 50
BtsCI GGATG 7 cut(s) 70, 178, 568, 682, 1400, 1739, 2027
BtsIMutI CAGTG 2 cut(s) 848, 2157
BveI ACCTGC 3 cut(s) 125, 1531, 1647
Cac8I GCNNGC 4 cut(s) 516, 594, 1737, 2391
CaiI CAGNNNCTG 1 cut(s) 2242
CciI TCATGA 3 cut(s) 471, 1180, 1225
CfoI GCGC 1 cut(s) 758
Cfr10I RCCGGY 1 cut(s) 2017
Cfr13I GGNCC 3 cut(s) 1110, 1971, 2053
ClaI ATCGAT 1 cut(s) 1630
CseI GACGC 1 cut(s) 2271
Csp6I GTAC 5 cut(s) 566, 974, 1284, 1310, 1912
CspCI CAANNNNNGTGG 2 cut(s) 1500, 1535
CviQI GTAC 5 cut(s) 566, 974, 1284, 1310, 1912
DdeI CTNAG 5 cut(s) 234, 328, 534, 1106, 1908
DraI TTTAAA 1 cut(s) 2080
DraIII CACNNNGTG 1 cut(s) 770
Eam1104I CTCTTC 3 cut(s) 824, 1374, 2034
EarI CTCTTC 3 cut(s) 824, 1374, 2034
Ecl136II GAGCTC 1 cut(s) 778
Eco130I CCWWGG 2 cut(s) 1338, 2425
Eco24I GRGCYC 1 cut(s) 780
Eco32I GATATC 1 cut(s) 1492
Eco47I GGWCC 2 cut(s) 1110, 1971
Eco53kI GAGCTC 1 cut(s) 778
Eco57I CTGAAG 1 cut(s) 2385
Eco91I GGTNACC 1 cut(s) 846
EcoICRI GAGCTC 1 cut(s) 778
EcoO65I GGTNACC 1 cut(s) 846
EcoRII CCWGG 4 cut(s) 192, 407, 1451, 1894
EcoRV GATATC 1 cut(s) 1492
EcoT14I CCWWGG 2 cut(s) 1338, 2425
EcoT22I ATGCAT 1 cut(s) 2201
EcoT38I GRGCYC 1 cut(s) 780
ErhI CCWWGG 2 cut(s) 1338, 2425
Esp3I CGTCTC 1 cut(s) 951
FalI AAGNNNNNCTT 2 cut(s) 1356, 1388
FaqI GGGAC 3 cut(s) 1477, 1856, 2132
FauNDI CATATG 2 cut(s) 892, 952
FbaI TGATCA 1 cut(s) 681
Fnu4HI GCNGC 6 cut(s) 597, 1077, 1214, 1578, 2006, 2240
FokI GGATG 7 cut(s) 57, 185, 575, 689, 1387, 1726, 2014
FriOI GRGCYC 1 cut(s) 780
Fsp4HI GCNGC 6 cut(s) 597, 1077, 1214, 1578, 2006, 2240
FspBI CTAG 5 cut(s) 75, 656, 1166, 1656, 2012
GlaI GCGC 1 cut(s) 757
GluI GCNGC 6 cut(s) 597, 1077, 1214, 1578, 2006, 2240
GsuI CTGGAG 1 cut(s) 1917
HaeIII GGCC 2 cut(s) 821, 2055
HapII CCGG 4 cut(s) 131, 1404, 2018, 2175
HgaI GACGC 1 cut(s) 2271
HhaI GCGC 1 cut(s) 758
Hin1I GRCGYC 1 cut(s) 2282
Hin6I GCGC 1 cut(s) 756
HinP1I GCGC 1 cut(s) 756
HincII GTYRAC 1 cut(s) 1260
HindII GTYRAC 1 cut(s) 1260
HindIII AAGCTT 3 cut(s) 1190, 1370, 2450
HpaII CCGG 4 cut(s) 131, 1404, 2018, 2175
HphI GGTGA 7 cut(s) 208, 494, 733, 752, 785, 1157, 1499
Hpy166II GTNNAC 5 cut(s) 401, 930, 1137, 1260, 1653
Hpy188III TCNNGA 9 cut(s) 335, 367, 438, 472, 992, 1181, 1226, 2012, 2363
Hpy8I GTNNAC 5 cut(s) 401, 930, 1137, 1260, 1653
Hpy99I CGWCG 1 cut(s) 289
HpyAV CCTTC 4 cut(s) 144, 240, 1358, 1988
HpyCH4III ACNGT 7 cut(s) 398, 1264, 1288, 1476, 1916, 2085, 2248
HpyF10VI GCNNNNNNNGC 2 cut(s) 1680, 2186
HpyF3I CTNAG 5 cut(s) 234, 328, 534, 1106, 1908
Hsp92I GRCGYC 1 cut(s) 2282
HspAI GCGC 1 cut(s) 756
Ksp22I TGATCA 1 cut(s) 681
LguI GCTCTTC 1 cut(s) 2034
Lsp1109I GCAGC 5 cut(s) 583, 1063, 1225, 1564, 2017
LweI GCATC 7 cut(s) 73, 379, 1409, 1622, 1748, 2017, 2208
MaeI CTAG 5 cut(s) 75, 656, 1166, 1656, 2012
MaeIII GTNAC 4 cut(s) 604, 635, 846, 1943
MfeI CAATTG 3 cut(s) 1119, 1296, 1678
MhlI GDGCHC 2 cut(s) 663, 780
MluCI AATT 9 cut(s) 88, 441, 940, 1114, 1119, 1296, 1567, 1678, 2098
MlyI GAGTC 3 cut(s) 223, 1391, 1773
MmeI TCCRAC 1 cut(s) 267
Mph1103I ATGCAT 1 cut(s) 2201
MroXI GAANNNNTTC 2 cut(s) 382, 833
MseI TTAA 8 cut(s) 53, 84, 224, 708, 1374, 2079, 2112, 2256
MslI CAYNNNNRTG 5 cut(s) 642, 771, 1807, 1979, 2204
MspA1I CMGCKG 2 cut(s) 1577, 2239
MspI CCGG 4 cut(s) 131, 1404, 2018, 2175
MspR9I CCNGG 4 cut(s) 194, 409, 1453, 1896
MunI CAATTG 3 cut(s) 1119, 1296, 1678
Mva1269I GAATGC 2 cut(s) 1333, 2155
MvaI CCWGG 4 cut(s) 194, 409, 1453, 1896
MwoI GCNNNNNNNGC 2 cut(s) 1680, 2186
NcoI CCATGG 1 cut(s) 2425
NdeI CATATG 2 cut(s) 892, 952
NlaIV GGNNCC 5 cut(s) 433, 808, 964, 2054, 2179
NmeAIII GCCGAG 1 cut(s) 847
NmuCI GTSAC 1 cut(s) 635
NsiI ATGCAT 1 cut(s) 2201
NspI RCATGY 3 cut(s) 596, 756, 1175
OliI CACNNNNGTG 1 cut(s) 1807
PaeI GCATGC 1 cut(s) 596
PagI TCATGA 3 cut(s) 471, 1180, 1225
PciI ACATGT 1 cut(s) 1171
PciSI GCTCTTC 1 cut(s) 2034
PcsI WCGNNNNNNNCGW 1 cut(s) 1960
PctI GAATGC 2 cut(s) 1333, 2155
PdmI GAANNNNTTC 2 cut(s) 382, 833
PflMI CCANNNNNTGG 2 cut(s) 350, 2306
PkrI GCNGC 6 cut(s) 598, 1078, 1215, 1579, 2007, 2241
Ple19I CGATCG 1 cut(s) 1501
PleI GAGTC 3 cut(s) 222, 1390, 1772
PpsI GAGTC 3 cut(s) 222, 1390, 1772
PscI ACATGT 1 cut(s) 1171
Psp124BI GAGCTC 1 cut(s) 780
Psp6I CCWGG 4 cut(s) 192, 407, 1451, 1894
PspEI GGTNACC 1 cut(s) 846
PspGI CCWGG 4 cut(s) 192, 407, 1451, 1894
PspN4I GGNNCC 5 cut(s) 433, 808, 964, 2054, 2179
PspPI GGNCC 3 cut(s) 1110, 1971, 2053
PstI CTGCAG 2 cut(s) 601, 1794
PstNI CAGNNNCTG 1 cut(s) 2242
PvuI CGATCG 1 cut(s) 1501
PvuII CAGCTG 1 cut(s) 1577
RsaI GTAC 5 cut(s) 567, 975, 1285, 1311, 1913
RsaNI GTAC 5 cut(s) 566, 974, 1284, 1310, 1912
RseI CAYNNNNRTG 5 cut(s) 642, 771, 1807, 1979, 2204
SacI GAGCTC 1 cut(s) 780
SapI GCTCTTC 1 cut(s) 2034
SaqAI TTAA 8 cut(s) 53, 84, 224, 708, 1374, 2079, 2112, 2256
SatI GCNGC 6 cut(s) 597, 1077, 1214, 1578, 2006, 2240
Sau96I GGNCC 3 cut(s) 1110, 1971, 2053
SchI GAGTC 3 cut(s) 223, 1391, 1773
ScrFI CCNGG 4 cut(s) 194, 409, 1453, 1896
SduI GDGCHC 2 cut(s) 663, 780
SfaNI GCATC 7 cut(s) 73, 379, 1409, 1622, 1748, 2017, 2208
SfcI CTRYAG 3 cut(s) 597, 1080, 1790
SinI GGWCC 2 cut(s) 1110, 1971
SmiMI CAYNNNNRTG 5 cut(s) 642, 771, 1807, 1979, 2204
SmlI CTYRAG 5 cut(s) 365, 436, 1028, 1332, 2032
SmoI CTYRAG 5 cut(s) 365, 436, 1028, 1332, 2032
SphI GCATGC 1 cut(s) 596
Sse9I AATT 9 cut(s) 88, 441, 940, 1114, 1119, 1296, 1567, 1678, 2098
SsiI CCGC 4 cut(s) 804, 851, 1683, 2239
SspI AATATT 1 cut(s) 457
SspMI CTAG 5 cut(s) 75, 656, 1166, 1656, 2012
SstI GAGCTC 1 cut(s) 780
StyD4I CCNGG 4 cut(s) 192, 407, 1451, 1894
StyI CCWWGG 2 cut(s) 1338, 2425
TaaI ACNGT 7 cut(s) 398, 1264, 1288, 1476, 1916, 2085, 2248
TaqI TCGA 3 cut(s) 1362, 1630, 1762
TasI AATT 9 cut(s) 88, 441, 940, 1114, 1119, 1296, 1567, 1678, 2098
TatI WGTACW 2 cut(s) 565, 1309
TauI GCSGC 1 cut(s) 2242
Tru1I TTAA 8 cut(s) 53, 84, 224, 708, 1374, 2079, 2112, 2256
Tru9I TTAA 8 cut(s) 53, 84, 224, 708, 1374, 2079, 2112, 2256
TscAI CASTG 2 cut(s) 848, 2157
TseFI GTSAC 1 cut(s) 635
TseI GCWGC 5 cut(s) 596, 1076, 1213, 1577, 2005
Tsp45I GTSAC 1 cut(s) 635
TspDTI ATGAA 6 cut(s) 27, 1398, 1764, 1859, 1997, 2016
TspGWI ACGGA 2 cut(s) 858, 975
TspRI CASTG 2 cut(s) 848, 2157
Van91I CCANNNNNTGG 2 cut(s) 350, 2306
VpaK11BI GGWCC 2 cut(s) 1110, 1971
XapI RAATTY 2 cut(s) 940, 1567
XbaI TCTAGA 1 cut(s) 2011
XceI RCATGY 3 cut(s) 596, 756, 1175
XmnI GAANNNNTTC 2 cut(s) 382, 833
XspI CTAG 5 cut(s) 75, 656, 1166, 1656, 2012
Zsp2I ATGCAT 1 cut(s) 2201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.