pycom10g11660
ERF Family

NAD(P)-binding Rossmann-fold superfamily protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
15244801 .. 15245442
642 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11660.2

Sequence Viewer

Length: 384 bp
ATGAAAGATGTGAATATGATCAAAGAAAATCGTATTTCAGAATGTTTTATATGCGCTCATTTTTTTCTTTCTTTTTGTACGTATGTTTATGAGGAAATTAGAAACAAGGTCAAAGGCCTAGCACTTTTTTCTTTTCTCAATATCGTTGATTCTATATCAAATTTTGTCAATATAGTTATCAACTACACACGCTCACGCACGTGCGGAAGGCCCTTTTATGATTACGGTGTTCTAGTGCCTATATTAGAAGAGAAATCAGTATGGGGAACAGATGCCCCCACAAGAATTGCATACATAGACACCCAGTTTAATCATGCATTGACCGTTTCCCTGGTTGATTTTAGAAATACTTTCTTTTTATTTACCTCTCGTTATGGTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.81

Weight (kDa)

7.66

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022280)

Species Orthologous Gene IDs
malus_domestica MD10G1135100.v1.1
pyrus_communis pycom10g11660 pycom10g11990 pycom10g12060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 204
AcsI RAATTY 1 cut(s) 160
AcvI CACGTG 1 cut(s) 201
AfaI GTAC 1 cut(s) 79
AjnI CCWGG 1 cut(s) 330
AleI CACNNNNGTG 1 cut(s) 199
AoxI GGCC 2 cut(s) 115, 209
ApoI RAATTY 1 cut(s) 160
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 1 cut(s) 210
BbrPI CACGTG 1 cut(s) 201
BciT130I CCWGG 1 cut(s) 332
BclI TGATCA 1 cut(s) 18
BfaI CTAG 2 cut(s) 119, 233
Bme1390I CCNGG 1 cut(s) 332
BmgT120I GGNCC 1 cut(s) 210
BmrFI CCNGG 1 cut(s) 332
BmrI ACTGGG 1 cut(s) 298
BmsI GCATC 1 cut(s) 262
BmuI ACTGGG 1 cut(s) 298
BsaAI YACGTR 2 cut(s) 81, 201
BsaJI CCNNGG 1 cut(s) 330
Bse1I ACTGG 1 cut(s) 304
BseBI CCWGG 1 cut(s) 332
BseDI CCNNGG 1 cut(s) 330
BseNI ACTGG 1 cut(s) 304
BshFI GGCC 2 cut(s) 117, 211
BsnI GGCC 2 cut(s) 117, 211
Bsp143I GATC 1 cut(s) 18
BspACI CCGC 1 cut(s) 204
BspANI GGCC 2 cut(s) 117, 211
BsrI ACTGG 1 cut(s) 304
BssECI CCNNGG 1 cut(s) 330
BssMI GATC 1 cut(s) 18
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 2 cut(s) 227, 325
Bst6I CTCTTC 1 cut(s) 243
BstBAI YACGTR 2 cut(s) 81, 201
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 1 cut(s) 21
BstMBI GATC 1 cut(s) 18
BstNI CCWGG 1 cut(s) 332
BstSCI CCNGG 1 cut(s) 330
BstSNI TACGTA 1 cut(s) 81
BsuRI GGCC 2 cut(s) 117, 211
CfoI GCGC 1 cut(s) 56
Cfr13I GGNCC 1 cut(s) 210
Csp6I GTAC 1 cut(s) 78
CspCI CAANNNNNGTGG 2 cut(s) 268, 303
CviAII CATG 1 cut(s) 314
CviJI RGCY 2 cut(s) 117, 211
CviKI_1 RGCY 2 cut(s) 117, 211
CviQI GTAC 1 cut(s) 78
DpnI GATC 1 cut(s) 20
DpnII GATC 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
Eco105I TACGTA 1 cut(s) 81
Eco147I AGGCCT 1 cut(s) 117
Eco72I CACGTG 1 cut(s) 201
EcoO109I RGGNCCY 1 cut(s) 210
EcoRII CCWGG 1 cut(s) 330
EcoT22I ATGCAT 1 cut(s) 319
FaeI CATG 1 cut(s) 317
FatI CATG 1 cut(s) 313
FbaI TGATCA 1 cut(s) 18
FspBI CTAG 2 cut(s) 119, 233
GlaI GCGC 1 cut(s) 55
HaeIII GGCC 2 cut(s) 117, 211
HhaI GCGC 1 cut(s) 56
Hin1II CATG 1 cut(s) 317
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HinfI GANTC 1 cut(s) 149
Hpy188I TCNGA 2 cut(s) 40, 383
HpyAV CCTTC 1 cut(s) 201
HpyCH4III ACNGT 2 cut(s) 227, 325
HpyCH4IV ACGT 2 cut(s) 80, 200
HpyCH4V TGCA 2 cut(s) 290, 317
HpySE526I ACGT 2 cut(s) 80, 200
Hsp92II CATG 1 cut(s) 317
HspAI GCGC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 18
Kzo9I GATC 1 cut(s) 18
LpnPI CCDG 3 cut(s) 317, 317, 344
LweI GCATC 1 cut(s) 262
MaeI CTAG 2 cut(s) 119, 233
MaeII ACGT 2 cut(s) 80, 200
MalI GATC 1 cut(s) 20
MboI GATC 1 cut(s) 18
MboII GAAGA 1 cut(s) 260
MluCI AATT 3 cut(s) 96, 160, 285
MnlI CCTC 2 cut(s) 85, 376
Mph1103I ATGCAT 1 cut(s) 319
MseI TTAA 1 cut(s) 309
MslI CAYNNNNRTG 1 cut(s) 199
MspR9I CCNGG 1 cut(s) 332
MvaI CCWGG 1 cut(s) 332
NdeII GATC 1 cut(s) 18
NlaIII CATG 1 cut(s) 317
NsiI ATGCAT 1 cut(s) 319
OliI CACNNNNGTG 1 cut(s) 199
PceI AGGCCT 1 cut(s) 117
PfeI GAWTC 1 cut(s) 149
PmaCI CACGTG 1 cut(s) 201
PmlI CACGTG 1 cut(s) 201
Ppu21I YACGTR 2 cut(s) 81, 201
Psp6I CCWGG 1 cut(s) 330
PspCI CACGTG 1 cut(s) 201
PspGI CCWGG 1 cut(s) 330
PspPI GGNCC 1 cut(s) 210
RsaI GTAC 1 cut(s) 79
RsaNI GTAC 1 cut(s) 78
RseI CAYNNNNRTG 1 cut(s) 199
SaqAI TTAA 1 cut(s) 309
Sau3AI GATC 1 cut(s) 18
Sau96I GGNCC 1 cut(s) 210
ScrFI CCNGG 1 cut(s) 332
SetI ASST 4 cut(s) 83, 111, 203, 368
SfaNI GCATC 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 199
SnaBI TACGTA 1 cut(s) 81
Sse9I AATT 3 cut(s) 96, 160, 285
SseBI AGGCCT 1 cut(s) 117
SsiI CCGC 1 cut(s) 204
SspMI CTAG 2 cut(s) 119, 233
StuI AGGCCT 1 cut(s) 117
StyD4I CCNGG 1 cut(s) 330
TaaI ACNGT 2 cut(s) 227, 325
TaiI ACGT 2 cut(s) 83, 203
TasI AATT 3 cut(s) 96, 160, 285
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 160
XspI CTAG 2 cut(s) 119, 233
Zsp2I ATGCAT 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.