Belongs to the AAA ATPase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g14690 |
| rosa_multiflora | Rmu_sc0000284.1_g000005 |
| rosa_samantha | Rh4CG160300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 109 |
| AcsI | RAATTY | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 274 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 313 |
| AgsI | TTSAA | 5 cut(s) | 39, 80, 131, 334, 361 |
| AjnI | CCWGG | 1 cut(s) | 106 |
| AluBI | AGCT | 1 cut(s) | 281 |
| AluI | AGCT | 1 cut(s) | 281 |
| AoxI | GGCC | 1 cut(s) | 109 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 375 |
| AspLEI | GCGC | 2 cut(s) | 165, 306 |
| AsuC2I | CCSGG | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 2 cut(s) | 328, 364 |
| BccI | CCATC | 1 cut(s) | 20 |
| BceAI | ACGGC | 1 cut(s) | 291 |
| BciT130I | CCWGG | 1 cut(s) | 108 |
| BcnI | CCSGG | 1 cut(s) | 250 |
| BfoI | RGCGCY | 1 cut(s) | 307 |
| Bme1390I | CCNGG | 2 cut(s) | 108, 250 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BmrFI | CCNGG | 2 cut(s) | 108, 250 |
| BpuMI | CCSGG | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 2 cut(s) | 234, 249 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 313 |
| Bse1I | ACTGG | 1 cut(s) | 19 |
| BseBI | CCWGG | 1 cut(s) | 108 |
| BseDI | CCNNGG | 2 cut(s) | 234, 249 |
| BseGI | GGATG | 3 cut(s) | 31, 195, 244 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 313 |
| BseNI | ACTGG | 1 cut(s) | 19 |
| BseRI | GAGGAG | 1 cut(s) | 57 |
| BseYI | CCCAGC | 1 cut(s) | 91 |
| BshFI | GGCC | 1 cut(s) | 111 |
| BsiSI | CCGG | 1 cut(s) | 249 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 313 |
| BsnI | GGCC | 1 cut(s) | 111 |
| BspANI | GGCC | 1 cut(s) | 111 |
| BspHI | TCATGA | 1 cut(s) | 228 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BsrI | ACTGG | 1 cut(s) | 19 |
| BssECI | CCNNGG | 2 cut(s) | 234, 249 |
| BssT1I | CCWWGG | 1 cut(s) | 234 |
| Bst2UI | CCWGG | 1 cut(s) | 108 |
| Bst6I | CTCTTC | 2 cut(s) | 144, 213 |
| BstC8I | GCNNGC | 1 cut(s) | 291 |
| BstF5I | GGATG | 3 cut(s) | 31, 195, 244 |
| BstH2I | RGCGCY | 1 cut(s) | 307 |
| BstHHI | GCGC | 2 cut(s) | 165, 306 |
| BstNI | CCWGG | 1 cut(s) | 108 |
| BstSCI | CCNGG | 2 cut(s) | 106, 248 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 111 |
| BtsCI | GGATG | 3 cut(s) | 31, 195, 244 |
| Cac8I | GCNNGC | 1 cut(s) | 291 |
| CciI | TCATGA | 1 cut(s) | 228 |
| CfoI | GCGC | 2 cut(s) | 165, 306 |
| CseI | GACGC | 1 cut(s) | 328 |
| Csp6I | GTAC | 1 cut(s) | 273 |
| CviAII | CATG | 1 cut(s) | 229 |
| CviJI | RGCY | 7 cut(s) | 84, 95, 111, 200, 254, 266, 281 |
| CviKI_1 | RGCY | 7 cut(s) | 84, 95, 111, 200, 254, 266, 281 |
| CviQI | GTAC | 1 cut(s) | 273 |
| EaeI | YGGCCR | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 2 cut(s) | 144, 213 |
| EarI | CTCTTC | 2 cut(s) | 144, 213 |
| Eco130I | CCWWGG | 1 cut(s) | 234 |
| Eco32I | GATATC | 2 cut(s) | 148, 259 |
| EcoRI | GAATTC | 1 cut(s) | 131 |
| EcoRII | CCWGG | 1 cut(s) | 106 |
| EcoRV | GATATC | 2 cut(s) | 148, 259 |
| EcoT14I | CCWWGG | 1 cut(s) | 234 |
| ErhI | CCWWGG | 1 cut(s) | 234 |
| FaeI | CATG | 1 cut(s) | 232 |
| FaiI | YATR | 6 cut(s) | 230, 269, 271, 311, 393, 395 |
| FatI | CATG | 1 cut(s) | 228 |
| FokI | GGATG | 3 cut(s) | 38, 202, 251 |
| GlaI | GCGC | 2 cut(s) | 164, 305 |
| GsaI | CCCAGC | 1 cut(s) | 95 |
| HaeII | RGCGCY | 1 cut(s) | 307 |
| HaeIII | GGCC | 1 cut(s) | 111 |
| HapII | CCGG | 1 cut(s) | 249 |
| HgaI | GACGC | 1 cut(s) | 328 |
| HhaI | GCGC | 2 cut(s) | 165, 306 |
| Hin1II | CATG | 1 cut(s) | 232 |
| Hin6I | GCGC | 2 cut(s) | 163, 304 |
| HinP1I | GCGC | 2 cut(s) | 163, 304 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HinfI | GANTC | 2 cut(s) | 35, 175 |
| HpaII | CCGG | 1 cut(s) | 249 |
| HphI | GGTGA | 2 cut(s) | 328, 364 |
| Hpy166II | GTNNAC | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 7 cut(s) | 39, 143, 172, 229, 334, 361, 380 |
| Hpy8I | GTNNAC | 1 cut(s) | 211 |
| HpyAV | CCTTC | 5 cut(s) | 307, 331, 337, 365, 377 |
| HpyCH4IV | ACGT | 1 cut(s) | 194 |
| HpySE526I | ACGT | 1 cut(s) | 194 |
| Hsp92II | CATG | 1 cut(s) | 232 |
| HspAI | GCGC | 2 cut(s) | 163, 304 |
| MaeII | ACGT | 1 cut(s) | 194 |
| MaeIII | GTNAC | 2 cut(s) | 9, 316 |
| MboII | GAAGA | 4 cut(s) | 131, 136, 230, 376 |
| MluCI | AATT | 2 cut(s) | 75, 131 |
| MnlI | CCTC | 3 cut(s) | 35, 147, 153 |
| MroXI | GAANNNNTTC | 1 cut(s) | 375 |
| MseI | TTAA | 2 cut(s) | 15, 296 |
| MspI | CCGG | 1 cut(s) | 249 |
| MspR9I | CCNGG | 2 cut(s) | 108, 250 |
| MvaI | CCWGG | 1 cut(s) | 108 |
| NciI | CCSGG | 1 cut(s) | 250 |
| NlaIII | CATG | 1 cut(s) | 232 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| PagI | TCATGA | 1 cut(s) | 228 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 109 |
| PdmI | GAANNNNTTC | 1 cut(s) | 375 |
| PfeI | GAWTC | 2 cut(s) | 35, 175 |
| Psp6I | CCWGG | 1 cut(s) | 106 |
| PspFI | CCCAGC | 1 cut(s) | 91 |
| PspGI | CCWGG | 1 cut(s) | 106 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| RsaI | GTAC | 1 cut(s) | 274 |
| RsaNI | GTAC | 1 cut(s) | 273 |
| SaqAI | TTAA | 2 cut(s) | 15, 296 |
| ScrFI | CCNGG | 2 cut(s) | 108, 250 |
| SetI | ASST | 5 cut(s) | 57, 197, 283, 318, 354 |
| Sse9I | AATT | 2 cut(s) | 75, 131 |
| StyD4I | CCNGG | 2 cut(s) | 106, 248 |
| StyI | CCWWGG | 1 cut(s) | 234 |
| TaiI | ACGT | 1 cut(s) | 197 |
| TasI | AATT | 2 cut(s) | 75, 131 |
| TfiI | GAWTC | 2 cut(s) | 35, 175 |
| Tru1I | TTAA | 2 cut(s) | 15, 296 |
| Tru9I | TTAA | 2 cut(s) | 15, 296 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 1 cut(s) | 326 |
| TspGWI | ACGGA | 2 cut(s) | 290, 341 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XmnI | GAANNNNTTC | 1 cut(s) | 375 |