pycom11g04210
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0008983
Physical Location & Seq
Forward (+)
3284330 .. 3285370
1041 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04210.1

Sequence Viewer

Length: 1041 bp
ATGAAGTCCTGTCCTTTTTTAGTTATTCACGTCCTTTTTGGCATTGCCATTCTTCTTCCCCTGGTTTTCTCTGACCTGACTTCCGATAGGCAAGCACTTATTGACTTCGCTGACGCTGTTCCCCATCGTCGAAAGCTTAGTTGGAACCCTGCTACCCCTGTCTGCACATCTTGGGTTGGCATCACTTGCACTCCAAATGGCGCCCGGGTTATTTCCCTCCGACTTCCTGGAGTTGGACTGTTGGGCTCTGTCCCACCAAACACCCTTGGTAGGCTAGATGCCCTCCGGATTCTTAGCCTTCGGTCTAATCTCCTCCGCGGTGTCCTTCCTTCTGATATTACCACCCTTCCTGCACTCCAGCACTTATACCTGCAACGTAACAACTTCTCTGGTGACATTCCTACCTCCTTTTCACCTCAACTCAATGTATTGGATTTATCATTTAATTCCTTCACAGGCAACATTCCACAAACAATGCTTAATTTGACACAACTCACAGGATTGAGCCTCCAGAACAACACCCTTTCCGGACCTATACCTGATCTCGACCTACCTAAGCTCAAGCGTCTAAATTTAAGTTACAACCGTCTTAATGGCTCTATACCATCATCCCTTCAAAGGTTCCCCAATTCATCTTTTGTGGGAAATTCACTTTTATGTGGAAGGCCTCTTAAGCCTTGCTCGCTCGTCCTTCCGCCGCCACCTCCTACTTCCAATCGACCACCACCAGTAGCTCCTCATAAAAAAAGCTCCAAGAAAAAGTTCAGGTTGGGATACATCATTGCTATTGCAGCTGGAGGGTCTGTTCTGCTGTTGCTGTTAGGCCTAATTATAGTTCTCTACTGTTTAAAGAAGGACAACGGAGGAACTAGTGTATTGAAGGGGAAGTCTTCTACCGGCGGAAGGAGTGAGAAGCCCAAAGAGGAGTTTGGGAGTGGGGTGCAAGAACCCGAGAAGAACAAACTAGTTTTCTTTGAAGGTTGTTCTTACAATTTTGATCTGGATGATTTGTTGAGGGCTTCAGCTGAAGTGTTAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

347

Amino Acids

37.38

Weight (kDa)

9.73

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 64 3.6e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 78 - 193 3.5e-06 Leucine-rich repeat region
LRR_8 PF13855 81 - 129 5.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 200
AccII CGCG 1 cut(s) 318
AccIII TCCGGA 2 cut(s) 285, 527
AciI CCGC 5 cut(s) 316, 318, 695, 698, 900
AcsI RAATTY 2 cut(s) 571, 646
AcuI CTGAAG 1 cut(s) 1005
AcyI GRCGYC 1 cut(s) 201
AfiI CCNNNNNNNGG 4 cut(s) 233, 270, 618, 903
AflII CTTAAG 1 cut(s) 671
AgsI TTSAA 3 cut(s) 617, 880, 977
AhlI ACTAGT 2 cut(s) 869, 964
AjiI CACGTC 1 cut(s) 31
AjnI CCWGG 2 cut(s) 60, 226
AjuI GAANNNNNNNTTGG 4 cut(s) 124, 156, 746, 778
AloI GAACNNNNNNTCC 2 cut(s) 789, 821
AluBI AGCT 6 cut(s) 136, 559, 734, 750, 794, 1025
AluI AGCT 6 cut(s) 136, 559, 734, 750, 794, 1025
Ama87I CYCGRG 2 cut(s) 204, 950
Aor13HI TCCGGA 2 cut(s) 285, 527
AoxI GGCC 2 cut(s) 665, 823
ApeKI GCWGC 1 cut(s) 791
ApoI RAATTY 2 cut(s) 571, 646
Asp700I GAANNNNTTC 1 cut(s) 761
AspLEI GCGC 1 cut(s) 203
AspS9I GGNCC 1 cut(s) 530
AsuC2I CCSGG 2 cut(s) 205, 206
AsuHPI GGTGA 2 cut(s) 404, 405
AvaI CYCGRG 2 cut(s) 204, 950
AvaII GGWCC 1 cut(s) 530
BanI GGYRCC 1 cut(s) 200
BanII GRGCYC 1 cut(s) 248
BbsI GAAGAC 1 cut(s) 882
BbvI GCAGC 1 cut(s) 803
BccI CCATC 2 cut(s) 132, 613
BciT130I CCWGG 2 cut(s) 62, 228
BciVI GTATCC 1 cut(s) 767
BcnI CCSGG 2 cut(s) 205, 206
BcuI ACTAGT 2 cut(s) 869, 964
BfaI CTAG 3 cut(s) 275, 870, 965
BfoI RGCGCY 1 cut(s) 204
BfrI CTTAAG 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 378
BfuI GTATCC 1 cut(s) 767
BisI GCNGC 2 cut(s) 698, 792
BlsI GCNGC 2 cut(s) 699, 793
Bme1390I CCNGG 4 cut(s) 62, 205, 206, 228
Bme18I GGWCC 1 cut(s) 530
BmeT110I CYCGRG 2 cut(s) 204, 950
BmgBI CACGTC 1 cut(s) 31
BmgT120I GGNCC 1 cut(s) 530
BmiI GGNNCC 3 cut(s) 146, 202, 623
BmrFI CCNGG 4 cut(s) 62, 205, 206, 228
BmsI GCATC 2 cut(s) 189, 268
BpiI GAAGAC 1 cut(s) 882
BpmI CTGGAG 4 cut(s) 249, 341, 494, 816
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 545
BpuMI CCSGG 2 cut(s) 205, 206
BsaHI GRCGYC 1 cut(s) 201
BsaJI CCNNGG 4 cut(s) 60, 204, 265, 316
BsaWI WCCGGW 2 cut(s) 285, 527
BsaXI ACNNNNNCTCC 4 cut(s) 175, 205, 789, 819
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 270, 618, 903
Bse118I RCCGGY 1 cut(s) 896
Bse1I ACTGG 1 cut(s) 728
Bse3DI GCAATG 2 cut(s) 42, 780
BseAI TCCGGA 2 cut(s) 285, 527
BseBI CCWGG 2 cut(s) 62, 228
BseDI CCNNGG 4 cut(s) 60, 204, 265, 316
BseGI GGATG 2 cut(s) 608, 1009
BseLI CCNNNNNNNGG 4 cut(s) 233, 270, 618, 903
BseMI GCAATG 2 cut(s) 42, 780
BseNI ACTGG 1 cut(s) 728
BseRI GAGGAG 3 cut(s) 302, 726, 938
BseXI GCAGC 1 cut(s) 803
BsgI GTGCAG 2 cut(s) 148, 336
Bsh1236I CGCG 1 cut(s) 318
BshFI GGCC 2 cut(s) 667, 825
BshNI GGYRCC 1 cut(s) 200
BsiHKCI CYCGRG 2 cut(s) 204, 950
BsiSI CCGG 4 cut(s) 205, 286, 528, 897
BslFI GGGAC 1 cut(s) 236
BslI CCNNNNNNNGG 4 cut(s) 233, 270, 618, 903
BsmFI GGGAC 1 cut(s) 236
BsnI GGCC 2 cut(s) 667, 825
BsoBI CYCGRG 2 cut(s) 204, 950
Bsp1286I GDGCHC 1 cut(s) 248
Bsp13I TCCGGA 2 cut(s) 285, 527
Bsp143I GATC 2 cut(s) 541, 997
BspACI CCGC 5 cut(s) 316, 318, 695, 698, 900
BspANI GGCC 2 cut(s) 667, 825
BspEI TCCGGA 2 cut(s) 285, 527
BspFNI CGCG 1 cut(s) 318
BspLI GGNNCC 3 cut(s) 146, 202, 623
BspMI ACCTGC 1 cut(s) 378
BspT107I GGYRCC 1 cut(s) 200
BspTI CTTAAG 1 cut(s) 671
BsrDI GCAATG 2 cut(s) 42, 780
BsrFI RCCGGY 1 cut(s) 896
BsrI ACTGG 1 cut(s) 728
BssAI RCCGGY 1 cut(s) 896
BssECI CCNNGG 4 cut(s) 60, 204, 265, 316
BssMI GATC 2 cut(s) 541, 997
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 265
Bst2UI CCWGG 2 cut(s) 62, 228
Bst4CI ACNGT 3 cut(s) 240, 587, 845
BstACI GRCGYC 1 cut(s) 201
BstAFI CTTAAG 1 cut(s) 671
BstAPI GCANNNNNTGC 1 cut(s) 186
BstC8I GCNNGC 2 cut(s) 93, 683
BstDEI CTNAG 3 cut(s) 137, 293, 555
BstDSI CCRYGG 1 cut(s) 316
BstF5I GGATG 2 cut(s) 608, 1009
BstFNI CGCG 1 cut(s) 318
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 1 cut(s) 203
BstKTI GATC 2 cut(s) 544, 1000
BstMBI GATC 2 cut(s) 541, 997
BstMWI GCNNNNNNNGC 4 cut(s) 186, 673, 682, 791
BstNI CCWGG 2 cut(s) 62, 228
BstSCI CCNGG 4 cut(s) 60, 203, 204, 226
BstUI CGCG 1 cut(s) 318
BstV1I GCAGC 1 cut(s) 803
BstV2I GAAGAC 1 cut(s) 882
BsuI GTATCC 1 cut(s) 767
BsuRI GGCC 2 cut(s) 667, 825
BtgI CCRYGG 1 cut(s) 316
BtrI CACGTC 1 cut(s) 31
BtsCI GGATG 2 cut(s) 608, 1009
BveI ACCTGC 1 cut(s) 378
Cac8I GCNNGC 2 cut(s) 93, 683
CfoI GCGC 1 cut(s) 203
Cfr10I RCCGGY 1 cut(s) 896
Cfr13I GGNCC 1 cut(s) 530
Cfr42I CCGCGG 1 cut(s) 319
Cfr9I CCCGGG 1 cut(s) 204
CseI GACGC 2 cut(s) 122, 554
DdeI CTNAG 3 cut(s) 137, 293, 555
DinI GGCGCC 1 cut(s) 202
DpnI GATC 2 cut(s) 543, 999
DpnII GATC 2 cut(s) 541, 997
DraI TTTAAA 1 cut(s) 849
EciI GGCGGA 2 cut(s) 684, 915
Eco130I CCWWGG 1 cut(s) 265
Eco147I AGGCCT 2 cut(s) 667, 825
Eco24I GRGCYC 1 cut(s) 248
Eco47I GGWCC 1 cut(s) 530
Eco57I CTGAAG 1 cut(s) 1005
Eco88I CYCGRG 2 cut(s) 204, 950
EcoRII CCWGG 2 cut(s) 60, 226
EcoT14I CCWWGG 1 cut(s) 265
EcoT38I GRGCYC 1 cut(s) 248
EgeI GGCGCC 1 cut(s) 202
EheI GGCGCC 1 cut(s) 202
ErhI CCWWGG 1 cut(s) 265
FaiI YATR 6 cut(s) 367, 536, 602, 658, 741, 833
FaqI GGGAC 1 cut(s) 236
Fnu4HI GCNGC 2 cut(s) 698, 792
FokI GGATG 2 cut(s) 595, 1016
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 2 cut(s) 698, 792
FspBI CTAG 3 cut(s) 275, 870, 965
GlaI GCGC 1 cut(s) 202
GluI GCNGC 2 cut(s) 698, 792
GsuI CTGGAG 4 cut(s) 249, 341, 494, 816
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 2 cut(s) 667, 825
HapII CCGG 4 cut(s) 205, 286, 528, 897
HgaI GACGC 2 cut(s) 122, 554
HhaI GCGC 1 cut(s) 203
Hin1I GRCGYC 1 cut(s) 201
Hin6I GCGC 1 cut(s) 201
HinP1I GCGC 1 cut(s) 201
HindIII AAGCTT 1 cut(s) 134
HinfI GANTC 1 cut(s) 289
HpaII CCGG 4 cut(s) 205, 286, 528, 897
HphI GGTGA 2 cut(s) 404, 405
Hpy188I TCNGA 4 cut(s) 73, 85, 221, 334
Hpy188III TCNNGA 5 cut(s) 286, 511, 528, 545, 1001
Hpy99I CGWCG 1 cut(s) 132
HpyCH4III ACNGT 3 cut(s) 240, 587, 845
HpyCH4IV ACGT 2 cut(s) 30, 376
HpyCH4V TGCA 6 cut(s) 165, 189, 353, 373, 791, 943
HpyF10VI GCNNNNNNNGC 4 cut(s) 186, 673, 682, 791
HpyF3I CTNAG 3 cut(s) 137, 293, 555
HpySE526I ACGT 2 cut(s) 30, 376
Hsp92I GRCGYC 1 cut(s) 201
HspAI GCGC 1 cut(s) 201
KasI GGCGCC 1 cut(s) 200
Kpn2I TCCGGA 2 cut(s) 285, 527
KspI CCGCGG 1 cut(s) 319
Kzo9I GATC 2 cut(s) 541, 997
LmnI GCTCC 2 cut(s) 739, 755
Lsp1109I GCAGC 1 cut(s) 803
LweI GCATC 2 cut(s) 189, 268
MaeI CTAG 3 cut(s) 275, 870, 965
MaeII ACGT 2 cut(s) 30, 376
MaeIII GTNAC 3 cut(s) 377, 392, 578
MalI GATC 2 cut(s) 543, 999
MboI GATC 2 cut(s) 541, 997
MboII GAAGA 4 cut(s) 44, 47, 882, 967
MhlI GDGCHC 1 cut(s) 248
MluCI AATT 7 cut(s) 445, 481, 571, 628, 646, 828, 991
Mly113I GGCGCC 1 cut(s) 201
MmeI TCCRAC 3 cut(s) 122, 214, 244
MroI TCCGGA 2 cut(s) 285, 527
MroXI GAANNNNTTC 1 cut(s) 761
MseI TTAA 6 cut(s) 444, 480, 575, 591, 672, 848
MslI CAYNNNNRTG 1 cut(s) 655
MspA1I CMGCKG 3 cut(s) 318, 794, 1025
MspCI CTTAAG 1 cut(s) 671
MspI CCGG 4 cut(s) 205, 286, 528, 897
MspR9I CCNGG 4 cut(s) 62, 205, 206, 228
MvaI CCWGG 2 cut(s) 62, 228
MvnI CGCG 1 cut(s) 318
MwoI GCNNNNNNNGC 4 cut(s) 186, 673, 682, 791
NarI GGCGCC 1 cut(s) 201
NciI CCSGG 2 cut(s) 205, 206
NdeII GATC 2 cut(s) 541, 997
NlaIV GGNNCC 3 cut(s) 146, 202, 623
NmuCI GTSAC 1 cut(s) 392
PceI AGGCCT 2 cut(s) 667, 825
PdmI GAANNNNTTC 1 cut(s) 761
PfeI GAWTC 1 cut(s) 289
PfoI TCCNGGA 1 cut(s) 226
PkrI GCNGC 2 cut(s) 699, 793
PluTI GGCGCC 1 cut(s) 204
Psp6I CCWGG 2 cut(s) 60, 226
PspGI CCWGG 2 cut(s) 60, 226
PspN4I GGNNCC 3 cut(s) 146, 202, 623
PspPI GGNCC 1 cut(s) 530
PvuII CAGCTG 2 cut(s) 794, 1025
RseI CAYNNNNRTG 1 cut(s) 655
SacII CCGCGG 1 cut(s) 319
SaqAI TTAA 6 cut(s) 444, 480, 575, 591, 672, 848
SatI GCNGC 2 cut(s) 698, 792
Sau3AI GATC 2 cut(s) 541, 997
Sau96I GGNCC 1 cut(s) 530
ScrFI CCNGG 4 cut(s) 62, 205, 206, 228
SduI GDGCHC 1 cut(s) 248
SfaNI GCATC 2 cut(s) 189, 268
SfoI GGCGCC 1 cut(s) 202
Sfr303I CCGCGG 1 cut(s) 319
SgrBI CCGCGG 1 cut(s) 319
SinI GGWCC 1 cut(s) 530
SmaI CCCGGG 1 cut(s) 206
SmiMI CAYNNNNRTG 1 cut(s) 655
SmlI CTYRAG 2 cut(s) 560, 671
SmoI CTYRAG 2 cut(s) 560, 671
SpeI ACTAGT 2 cut(s) 869, 964
Sse9I AATT 7 cut(s) 445, 481, 571, 628, 646, 828, 991
SseBI AGGCCT 2 cut(s) 667, 825
SsiI CCGC 5 cut(s) 316, 318, 695, 698, 900
SspDI GGCGCC 1 cut(s) 200
SspMI CTAG 3 cut(s) 275, 870, 965
StuI AGGCCT 2 cut(s) 667, 825
StyD4I CCNGG 4 cut(s) 60, 203, 204, 226
StyI CCWWGG 1 cut(s) 265
TaaI ACNGT 3 cut(s) 240, 587, 845
TaiI ACGT 2 cut(s) 33, 379
TaqI TCGA 3 cut(s) 130, 546, 718
TaqII GACCGA 1 cut(s) 291
TasI AATT 7 cut(s) 445, 481, 571, 628, 646, 828, 991
TauI GCSGC 1 cut(s) 700
TfiI GAWTC 1 cut(s) 289
Tru1I TTAA 6 cut(s) 444, 480, 575, 591, 672, 848
Tru9I TTAA 6 cut(s) 444, 480, 575, 591, 672, 848
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 1 cut(s) 791
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 2 cut(s) 17, 621
TspGWI ACGGA 1 cut(s) 876
TspMI CCCGGG 1 cut(s) 204
Vha464I CTTAAG 1 cut(s) 671
VpaK11BI GGWCC 1 cut(s) 530
XapI RAATTY 2 cut(s) 571, 646
XmaI CCCGGG 1 cut(s) 204
XmnI GAANNNNTTC 1 cut(s) 761
XspI CTAG 3 cut(s) 275, 870, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.