pycom11g04220
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0008983
Physical Location & Seq
Forward (+)
3285476 .. 3286978
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04220.2

Sequence Viewer

Length: 756 bp
ATGGAGATTGTGGGAAGAGTTGGACAGCACGCAAATGTTGTTCCACTCCGTGCTTATTATTACTCAAAGGACGAGAAGCTTCTAGTTTATGATTATATCTCAAATGGGAGCTTATCTGCGCTTTTACATGGAAACCGAGGAGGCGGAAGAACTGCATTAGACTGGGACTCGAGGGTAAAGATTTCCCTTGGCACCGCGAGGGGAATTGCTCATATCCATTCTGTGGGTGGTCCAAAATTCACTCATGGAAATATCAAGTCCACAAATGTCCTTCTCAGCCAAGACCTCAATGGGTGCATCTCTGATGTTGGCCTGACTCCTCTCATGAATGTTTCTGCCACTGCTCGGAGTGCAGGCTATCGCGCTCCAGAGGTGATTGAAACCCGCAGGCACTCTCATAAATCAGATGTGTACAGCTTTGGTGTCGTCCTCCTTGAGATGCTGACTGGAAAAGCTCCCCTCCAGTCACCGGGGCGTGATGATATGGTTGATCTTCCTCGGTGGGTCCAGTCCGTGGTCAGGGAGGAGTGGACCGCAGAGGTGTTTGACGTTGAACTGATGAGGTACCAAAACATTGAAGAAGAAATGGTCCAAATGTTGCAAATTGCAATGGCGTGCGTGGCCAAGGTTCCGGATATGCGACCGAGCATGGAAGAAGTTGTTAGAATGATTGAAGAAATCCGGCAATCAGACTCAGAGAACCGGCCATCTTCCGAAGAGAATAAATCAAAGCACTCAACTGTGCAGACTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

252

Amino Acids

27.97

Weight (kDa)

6.08

Isoelectric Point (pI)

55.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 564
AccB1I GGYRCC 2 cut(s) 191, 564
AccB7I CCANNNNNTGG 2 cut(s) 223, 514
AccII CGCG 2 cut(s) 197, 363
AccIII TCCGGA 1 cut(s) 631
AciI CCGC 4 cut(s) 144, 195, 385, 534
AcoI YGGCCR 2 cut(s) 621, 704
AcsI RAATTY 1 cut(s) 236
AdeI CACNNNGTG 1 cut(s) 50
AfaI GTAC 2 cut(s) 413, 566
AfiI CCNNNNNNNGG 5 cut(s) 223, 345, 469, 514, 519
AgsI TTSAA 4 cut(s) 380, 554, 578, 674
AluBI AGCT 4 cut(s) 79, 111, 417, 455
AluI AGCT 4 cut(s) 79, 111, 417, 455
Ama87I CYCGRG 1 cut(s) 169
Aor13HI TCCGGA 1 cut(s) 631
AoxI GGCC 3 cut(s) 310, 621, 704
ApoI RAATTY 1 cut(s) 236
Asp718I GGTACC 1 cut(s) 564
AspLEI GCGC 2 cut(s) 121, 365
AspS9I GGNCC 4 cut(s) 230, 505, 531, 589
AsuC2I CCSGG 1 cut(s) 471
AsuHPI GGTGA 2 cut(s) 385, 459
AvaI CYCGRG 1 cut(s) 169
AvaII GGWCC 4 cut(s) 230, 505, 531, 589
BalI TGGCCA 1 cut(s) 623
BanI GGYRCC 2 cut(s) 191, 564
BccI CCATC 1 cut(s) 715
BcnI CCSGG 1 cut(s) 471
BfaI CTAG 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 471
Bme18I GGWCC 4 cut(s) 230, 505, 531, 589
BmeT110I CYCGRG 1 cut(s) 169
BmgT120I GGNCC 4 cut(s) 230, 505, 531, 589
BmiI GGNNCC 4 cut(s) 193, 506, 566, 630
BmrFI CCNGG 1 cut(s) 471
BmrI ACTGGG 1 cut(s) 172
BmsI GCATC 2 cut(s) 306, 429
BmuI ACTGGG 1 cut(s) 172
BpmI CTGGAG 2 cut(s) 351, 446
BpuEI CTTGAG 1 cut(s) 455
BpuMI CCSGG 1 cut(s) 471
BsaJI CCNNGG 6 cut(s) 136, 187, 470, 497, 513, 624
BsaWI WCCGGW 1 cut(s) 631
Bsc4I CCNNNNNNNGG 5 cut(s) 223, 345, 469, 514, 519
Bse118I RCCGGY 1 cut(s) 702
Bse1I ACTGG 4 cut(s) 167, 451, 463, 508
Bse3DI GCAATG 1 cut(s) 615
BseAI TCCGGA 1 cut(s) 631
BseDI CCNNGG 6 cut(s) 136, 187, 470, 497, 513, 624
BseLI CCNNNNNNNGG 5 cut(s) 223, 345, 469, 514, 519
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 2 cut(s) 289, 708
BseNI ACTGG 4 cut(s) 167, 451, 463, 508
BseRI GAGGAG 3 cut(s) 153, 309, 539
BsgI GTGCAG 1 cut(s) 372
Bsh1236I CGCG 2 cut(s) 197, 363
Bsh1285I CGRYCG 1 cut(s) 644
BshFI GGCC 3 cut(s) 312, 623, 706
BshNI GGYRCC 2 cut(s) 191, 564
BsiEI CGRYCG 1 cut(s) 644
BsiHKCI CYCGRG 1 cut(s) 169
BsiSI CCGG 4 cut(s) 470, 632, 682, 703
BslFI GGGAC 1 cut(s) 179
BslI CCNNNNNNNGG 5 cut(s) 223, 345, 469, 514, 519
BsmFI GGGAC 1 cut(s) 179
BsnI GGCC 3 cut(s) 312, 623, 706
BsoBI CYCGRG 1 cut(s) 169
Bsp13I TCCGGA 1 cut(s) 631
Bsp1407I TGTACA 1 cut(s) 411
Bsp143I GATC 1 cut(s) 490
BspACI CCGC 4 cut(s) 144, 195, 385, 534
BspANI GGCC 3 cut(s) 312, 623, 706
BspCNI CTCAG 2 cut(s) 288, 707
BspEI TCCGGA 1 cut(s) 631
BspFNI CGCG 2 cut(s) 197, 363
BspHI TCATGA 1 cut(s) 324
BspLI GGNNCC 4 cut(s) 193, 506, 566, 630
BspT107I GGYRCC 2 cut(s) 191, 564
BsrDI GCAATG 1 cut(s) 615
BsrFI RCCGGY 1 cut(s) 702
BsrGI TGTACA 1 cut(s) 411
BsrI ACTGG 4 cut(s) 167, 451, 463, 508
BssAI RCCGGY 1 cut(s) 702
BssECI CCNNGG 6 cut(s) 136, 187, 470, 497, 513, 624
BssMI GATC 1 cut(s) 490
BssT1I CCWWGG 2 cut(s) 187, 624
Bst4CI ACNGT 1 cut(s) 742
Bst6I CTCTTC 2 cut(s) 10, 711
BstAUI TGTACA 1 cut(s) 411
BstC8I GCNNGC 4 cut(s) 30, 355, 389, 616
BstDEI CTNAG 2 cut(s) 275, 694
BstDSI CCRYGG 1 cut(s) 513
BstFNI CGCG 2 cut(s) 197, 363
BstHHI GCGC 2 cut(s) 121, 365
BstKTI GATC 1 cut(s) 493
BstMBI GATC 1 cut(s) 490
BstMCI CGRYCG 1 cut(s) 644
BstMWI GCNNNNNNNGC 2 cut(s) 350, 620
BstSCI CCNGG 1 cut(s) 469
BstUI CGCG 2 cut(s) 197, 363
BsuRI GGCC 3 cut(s) 312, 623, 706
BtgI CCRYGG 1 cut(s) 513
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 4 cut(s) 30, 355, 389, 616
CciI TCATGA 1 cut(s) 324
CfoI GCGC 2 cut(s) 121, 365
Cfr10I RCCGGY 1 cut(s) 702
Cfr13I GGNCC 4 cut(s) 230, 505, 531, 589
Csp6I GTAC 2 cut(s) 412, 565
CviAII CATG 4 cut(s) 128, 245, 325, 649
CviJI RGCY 9 cut(s) 79, 111, 279, 312, 357, 417, 455, 623, 706
CviKI_1 RGCY 9 cut(s) 79, 111, 279, 312, 357, 417, 455, 623, 706
CviQI GTAC 2 cut(s) 412, 565
DdeI CTNAG 2 cut(s) 275, 694
DpnI GATC 1 cut(s) 492
DpnII GATC 1 cut(s) 490
DraIII CACNNNGTG 1 cut(s) 50
EaeI YGGCCR 2 cut(s) 621, 704
Eam1104I CTCTTC 2 cut(s) 10, 711
EarI CTCTTC 2 cut(s) 10, 711
EciI GGCGGA 1 cut(s) 159
Eco130I CCWWGG 2 cut(s) 187, 624
Eco47I GGWCC 4 cut(s) 230, 505, 531, 589
Eco88I CYCGRG 1 cut(s) 169
EcoT14I CCWWGG 2 cut(s) 187, 624
ErhI CCWWGG 2 cut(s) 187, 624
FaeI CATG 4 cut(s) 131, 248, 328, 652
FaqI GGGAC 1 cut(s) 179
FatI CATG 4 cut(s) 127, 244, 324, 648
FauI CCCGC 1 cut(s) 392
FspBI CTAG 1 cut(s) 83
GlaI GCGC 2 cut(s) 120, 364
GsuI CTGGAG 2 cut(s) 351, 446
HaeIII GGCC 3 cut(s) 312, 623, 706
HapII CCGG 4 cut(s) 470, 632, 682, 703
HhaI GCGC 2 cut(s) 121, 365
Hin1II CATG 4 cut(s) 131, 248, 328, 652
Hin6I GCGC 2 cut(s) 119, 363
HinP1I GCGC 2 cut(s) 119, 363
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 4 cut(s) 167, 316, 692, 748
HpaII CCGG 4 cut(s) 470, 632, 682, 703
HphI GGTGA 2 cut(s) 385, 459
Hpy166II GTNNAC 3 cut(s) 261, 412, 531
Hpy188I TCNGA 6 cut(s) 304, 348, 406, 691, 697, 715
Hpy188III TCNNGA 3 cut(s) 325, 368, 632
Hpy8I GTNNAC 3 cut(s) 261, 412, 531
HpyAV CCTTC 1 cut(s) 281
HpyCH4III ACNGT 1 cut(s) 742
HpyCH4IV ACGT 1 cut(s) 549
HpyCH4V TGCA 6 cut(s) 155, 297, 353, 601, 608, 745
HpyF10VI GCNNNNNNNGC 2 cut(s) 350, 620
HpyF3I CTNAG 2 cut(s) 275, 694
HpySE526I ACGT 1 cut(s) 549
Hsp92II CATG 4 cut(s) 131, 248, 328, 652
HspAI GCGC 2 cut(s) 119, 363
Kpn2I TCCGGA 1 cut(s) 631
KpnI GGTACC 1 cut(s) 568
Kzo9I GATC 1 cut(s) 490
LmnI GCTCC 3 cut(s) 108, 370, 460
LweI GCATC 2 cut(s) 306, 429
MaeI CTAG 1 cut(s) 83
MaeII ACGT 1 cut(s) 549
MaeIII GTNAC 1 cut(s) 465
MalI GATC 1 cut(s) 492
MboI GATC 1 cut(s) 490
MboII GAAGA 9 cut(s) 27, 159, 485, 590, 593, 665, 686, 702, 728
MlsI TGGCCA 1 cut(s) 623
MluCI AATT 3 cut(s) 204, 236, 603
MluNI TGGCCA 1 cut(s) 623
MlyI GAGTC 4 cut(s) 161, 310, 686, 742
Mox20I TGGCCA 1 cut(s) 623
MroI TCCGGA 1 cut(s) 631
MscI TGGCCA 1 cut(s) 623
MslI CAYNNNNRTG 1 cut(s) 33
Msp20I TGGCCA 1 cut(s) 623
MspI CCGG 4 cut(s) 470, 632, 682, 703
MspR9I CCNGG 1 cut(s) 471
MvnI CGCG 2 cut(s) 197, 363
MwoI GCNNNNNNNGC 2 cut(s) 350, 620
NciI CCSGG 1 cut(s) 471
NdeII GATC 1 cut(s) 490
NlaIII CATG 4 cut(s) 131, 248, 328, 652
NlaIV GGNNCC 4 cut(s) 193, 506, 566, 630
NmuCI GTSAC 1 cut(s) 465
PaeR7I CTCGAG 1 cut(s) 169
PagI TCATGA 1 cut(s) 324
PflMI CCANNNNNTGG 2 cut(s) 223, 514
PleI GAGTC 4 cut(s) 161, 310, 686, 742
PpsI GAGTC 4 cut(s) 161, 310, 686, 742
PspN4I GGNNCC 4 cut(s) 193, 506, 566, 630
PspPI GGNCC 4 cut(s) 230, 505, 531, 589
PspXI VCTCGAGB 1 cut(s) 169
RsaI GTAC 2 cut(s) 413, 566
RsaNI GTAC 2 cut(s) 412, 565
RseI CAYNNNNRTG 1 cut(s) 33
Sau3AI GATC 1 cut(s) 490
Sau96I GGNCC 4 cut(s) 230, 505, 531, 589
SchI GAGTC 4 cut(s) 161, 310, 686, 742
ScrFI CCNGG 1 cut(s) 471
SfaNI GCATC 2 cut(s) 306, 429
Sfr274I CTCGAG 1 cut(s) 169
SinI GGWCC 4 cut(s) 230, 505, 531, 589
SlaI CTCGAG 1 cut(s) 169
SmiMI CAYNNNNRTG 1 cut(s) 33
SmlI CTYRAG 2 cut(s) 169, 434
SmoI CTYRAG 2 cut(s) 169, 434
Sse9I AATT 3 cut(s) 204, 236, 603
SsiI CCGC 4 cut(s) 144, 195, 385, 534
SspMI CTAG 1 cut(s) 83
StyD4I CCNGG 1 cut(s) 469
StyI CCWWGG 2 cut(s) 187, 624
TaaI ACNGT 1 cut(s) 742
TaiI ACGT 1 cut(s) 552
TaqI TCGA 1 cut(s) 170
TaqII GACCGA 1 cut(s) 658
TasI AATT 3 cut(s) 204, 236, 603
TatI WGTACW 1 cut(s) 411
TscAI CASTG 1 cut(s) 346
TseFI GTSAC 1 cut(s) 465
Tsp45I GTSAC 1 cut(s) 465
TspDTI ATGAA 1 cut(s) 341
TspGWI ACGGA 2 cut(s) 38, 502
TspRI CASTG 1 cut(s) 346
Van91I CCANNNNNTGG 2 cut(s) 223, 514
VpaK11BI GGWCC 4 cut(s) 230, 505, 531, 589
XapI RAATTY 1 cut(s) 236
XcmI CCANNNNNNNNNTGG 2 cut(s) 224, 287
XhoI CTCGAG 1 cut(s) 169
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.