pycom11g04700

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0021274
Physical Location & Seq
Reverse (-)
3620190 .. 3622800
2611 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04700.1

Sequence Viewer

Length: 1722 bp
ATGGTTGCTTTGCTCTTGAGCGCTGAAAGCCGTATGGACGACTATAACCCTACTTTCAGTCCTGATCACACCATTACAGCCCTCTTTGCCCCTTCTGGCTCCACTCCCAATCCTGGTCGTGGAACCACACTTCACCGAGGAAATGGTCGTACATCCTCATTCTGTCGTGGTGGTTTTCAAGGTCGTGGCTTTTTTCAAGGTCGCGGTGCTGGTAATCCTTTTGTTGGCCGTCGTGGTGGTTCAAACAGTGGTTTGTTTCATGGTGGATCCGGTCGTGGCTCATTTCAGAATCGAGGACTTCTTCCTACACCAAATGCTGGTCTTCGTCGCTCTTCCTATCTTCCCAACCATGCTGCGGATGCTCCCTTTTCCTCTAATATTTGTAACTATTATGGTGATCATCGTCATTCTACCGCAAATTGTTTCAAGTCTCATTTTTCCGAAGGCCGCTATCCACAATCTCATGCTATGATGGCTGCCTCTCCTGTGGTTAATGCACGGTCCCCTACATGGTATACCGACAGTGGCGCATCGTCACACATCACCAATGATTTAGCTAATTTGAGCCTCTCCACAGAATATATTGGCCAAGACCAAGTCGCGGTTGGTAATGGTGCAGGTTTGTCTATAAAGCATATTGGTTCCGGTTTCGTGTCTCAATTTCCTTTAAATTCTGTGTTGCATTGTCCTTCTGCTTCTGCTAATCTACTGAGCGTTCATCGCTTTTGTTGTGATAATCATTGCTACTTCATTTTCACTCCTACTGATTTCTTTGTGAATGATCTATCCACGGGGAAGACGCTTTTCCACGGCAAGAGTGAGAATGGATTGTATCCGTTTCGTGGCTATCGCTGTTATGATATGTCAAATGGACGAGTTTATTTGTCACGTCATGTGGTTTTTGATGAGGAAACTTTTCCATTCGACAACCCTACACAATTCTCCTCAGTCTTGCTGTCAGAAGCTTACTCTCCCATGGTTATCACTCCTTCTCCCTTACCACCTCTCCCTCAGGTACCTTCATCATCTCATATTTCTATTCCTCATACTCTAACATCCTCTTCTAGTGCAGCACCTCTCTTCCCCTTGCAACCTTCATCAAGTTCACCATTGTCTACACCTTCACTTTCCTCGCCACCTCATTCTCAACCTGCTCCTGATAGCTCTGACAGTTTGATTTCCATTAATGAGGCTCCTCCACCTTCCTCCGCTTCTGCTCCCCATCCCATGCTCACTCGGTCTAAATCTGGCATTCGAAAACCAAACCCCAAATATGCTTTATTGACATCATTACAAGCTCCTGATTCTGAACCAACCTCGTTTCGCGAGGCAAATCAATTATCTCATTGGCGTGATGCAATGACATTGGAGTTTAAGGCCTTGAAAGCTGCTGGTACATGGGAGTTGGTACCTTCTTCAACTGCTACTCATGTTCTTCCTTGCAAGTGGGTCTATCGCACAAAGCGGAAATCTGACGGTACAGTGGAGCGATATAAAGCTCGTCTTGTTGCCAATGGATTTCATCAAACGATGGGTGTTGATTACACAGAGACGTTTAGTCCGGTGGTTAAGCATGTCACCATTCGTCTGGTTCTTGCCCTTGCAGTTTCTTATAATTGGCCTATACGCCAACTTGATGTCCAAAATGCGTTTTTGCACGAGAATCTCTCTGAAGAAGTTTTCATGAAACAACCACGTGGTTTTGAAGACCCCGAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

574

Amino Acids

62.37

Weight (kDa)

8.76

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 171 - 242 1.4e-09 Pol polyprotein, beta-barrel domain
SH3_retrovirus PF25597 281 - 311 2.1e-08 Retroviral polymerase SH3-like domain
RVT_2 PF07727 466 - 569 3.1e-32 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021274)

Species Orthologous Gene IDs
pyrus_communis pycom11g04700 pycom13g12090 pycom14g19030 pycom16g20010
rosa_wichuraiana Rw6G007970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1614
Acc36I ACCTGC 2 cut(s) 608, 1159
Acc65I GGTACC 2 cut(s) 1015, 1408
AccB1I GGYRCC 2 cut(s) 1015, 1408
AccB7I CCANNNNNTGG 1 cut(s) 317
AccI GTMKAC 2 cut(s) 515, 1115
AccII CGCG 3 cut(s) 204, 602, 1326
AciI CCGC 7 cut(s) 204, 356, 414, 448, 602, 1209, 1465
AclWI GGATC 2 cut(s) 261, 274
AcoI YGGCCR 2 cut(s) 226, 586
AcsI RAATTY 1 cut(s) 670
AcuI CTGAAG 1 cut(s) 1692
AcvI CACGTG 1 cut(s) 1697
AfaI GTAC 5 cut(s) 151, 1017, 1396, 1410, 1480
AfeI AGCGCT 1 cut(s) 22
AfiI CCNNNNNNNGG 8 cut(s) 113, 119, 224, 317, 355, 510, 601, 842
AgsI TTSAA 7 cut(s) 179, 197, 243, 427, 1384, 1419, 1706
AhdI GACNNNNNGTC 1 cut(s) 1557
AjiI CACGTC 1 cut(s) 890
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 6 cut(s) 557, 965, 1164, 1298, 1388, 1499
AluI AGCT 6 cut(s) 557, 965, 1164, 1298, 1388, 1499
Alw26I GTCTC 3 cut(s) 435, 660, 1544
AlwI GGATC 2 cut(s) 261, 274
Ama87I CYCGRG 1 cut(s) 1712
Aor51HI AGCGCT 1 cut(s) 22
AoxI GGCC 5 cut(s) 226, 445, 586, 1377, 1619
ApeKI GCWGC 4 cut(s) 353, 476, 1070, 1388
ApoI RAATTY 1 cut(s) 670
AseI ATTAAT 1 cut(s) 1185
Asp700I GAANNNNTTC 1 cut(s) 915
Asp718I GGTACC 2 cut(s) 1015, 1408
AspLEI GCGC 2 cut(s) 23, 530
AspS9I GGNCC 1 cut(s) 501
AsuHPI GGTGA 5 cut(s) 125, 407, 535, 1098, 1570
AsuII TTCGAA 1 cut(s) 1255
AvaI CYCGRG 1 cut(s) 1712
AvaII GGWCC 1 cut(s) 501
AxyI CCTNAGG 1 cut(s) 1011
BalI TGGCCA 1 cut(s) 588
BamHI GGATCC 1 cut(s) 266
BanI GGYRCC 2 cut(s) 1015, 1408
BauI CACGAG 1 cut(s) 1658
BbrPI CACGTG 1 cut(s) 1697
BbsI GAAGAC 3 cut(s) 314, 803, 1713
BbvI GCAGC 4 cut(s) 340, 463, 1082, 1375
BccI CCATC 3 cut(s) 466, 1230, 1525
BceAI ACGGC 3 cut(s) 15, 213, 826
BciT130I CCWGG 1 cut(s) 114
BciVI GTATCC 1 cut(s) 843
BclI TGATCA 2 cut(s) 64, 397
BcoDI GTCTC 3 cut(s) 435, 660, 1544
BfaI CTAG 1 cut(s) 1065
BfoI RGCGCY 1 cut(s) 24
BfuAI ACCTGC 2 cut(s) 608, 1159
BfuI GTATCC 1 cut(s) 843
BisI GCNGC 5 cut(s) 354, 448, 477, 1071, 1389
BlsI GCNGC 5 cut(s) 355, 449, 478, 1072, 1390
Bme1390I CCNGG 1 cut(s) 114
Bme18I GGWCC 1 cut(s) 501
BmeRI GACNNNNNGTC 1 cut(s) 1557
BmeT110I CYCGRG 1 cut(s) 1712
BmgBI CACGTC 1 cut(s) 890
BmgT120I GGNCC 1 cut(s) 501
BmiI GGNNCC 8 cut(s) 100, 124, 268, 503, 643, 1017, 1194, 1410
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 3 cut(s) 349, 539, 1345
BpiI GAAGAC 3 cut(s) 314, 803, 1713
BplI GAGNNNNNCTC 2 cut(s) 1652, 1684
Bpu14I TTCGAA 1 cut(s) 1255
BpuEI CTTGAG 1 cut(s) 37
BsaAI YACGTR 1 cut(s) 1697
BsaJI CCNNGG 5 cut(s) 136, 789, 808, 975, 1713
BsaWI WCCGGW 3 cut(s) 269, 644, 1561
BsaXI ACNNNNNCTCC 4 cut(s) 976, 990, 1006, 1020
Bsc4I CCNNNNNNNGG 8 cut(s) 113, 119, 224, 317, 355, 510, 601, 842
Bse21I CCTNAGG 1 cut(s) 1011
Bse3DI GCAATG 2 cut(s) 739, 1365
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 5 cut(s) 136, 789, 808, 975, 1713
BseGI GGATG 4 cut(s) 152, 364, 1055, 1222
BseLI CCNNNNNNNGG 8 cut(s) 113, 119, 224, 317, 355, 510, 601, 842
BseMI GCAATG 2 cut(s) 739, 1365
BseMII CTCAG 3 cut(s) 701, 960, 1025
BseRI GAGGAG 2 cut(s) 934, 1185
BseXI GCAGC 4 cut(s) 340, 463, 1082, 1375
BsgI GTGCAG 2 cut(s) 636, 1089
Bsh1236I CGCG 3 cut(s) 204, 602, 1326
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 5 cut(s) 228, 447, 588, 1379, 1621
BshNI GGYRCC 2 cut(s) 1015, 1408
BsiEI CGRYCG 1 cut(s) 274
BsiHKCI CYCGRG 1 cut(s) 1712
BsiSI CCGG 3 cut(s) 270, 645, 1562
BslFI GGGAC 1 cut(s) 487
BslI CCNNNNNNNGG 8 cut(s) 113, 119, 224, 317, 355, 510, 601, 842
BsmAI GTCTC 3 cut(s) 435, 660, 1544
BsmBI CGTCTC 1 cut(s) 1544
BsmFI GGGAC 1 cut(s) 487
BsmI GAATGC 1 cut(s) 1251
BsnI GGCC 5 cut(s) 228, 447, 588, 1379, 1621
BsoBI CYCGRG 1 cut(s) 1712
Bsp119I TTCGAA 1 cut(s) 1255
Bsp143I GATC 4 cut(s) 64, 266, 397, 781
Bsp19I CCATGG 1 cut(s) 975
Bsp68I TCGCGA 1 cut(s) 1326
BspACI CCGC 7 cut(s) 204, 356, 414, 448, 602, 1209, 1465
BspANI GGCC 5 cut(s) 228, 447, 588, 1379, 1621
BspCNI CTCAG 3 cut(s) 702, 959, 1024
BspFNI CGCG 3 cut(s) 204, 602, 1326
BspHI TCATGA 1 cut(s) 1683
BspLI GGNNCC 8 cut(s) 100, 124, 268, 503, 643, 1017, 1194, 1410
BspMI ACCTGC 2 cut(s) 608, 1159
BspPI GGATC 2 cut(s) 261, 274
BspQI GCTCTTC 1 cut(s) 337
BspT104I TTCGAA 1 cut(s) 1255
BspT107I GGYRCC 2 cut(s) 1015, 1408
BsrDI GCAATG 2 cut(s) 739, 1365
BssECI CCNNGG 5 cut(s) 136, 789, 808, 975, 1713
BssMI GATC 4 cut(s) 64, 266, 397, 781
BssNAI GTATAC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1658
BssT1I CCWWGG 1 cut(s) 975
Bst1107I GTATAC 1 cut(s) 516
Bst2BI CACGAG 1 cut(s) 1658
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 6 cut(s) 248, 501, 524, 1172, 1478, 1483
Bst6I CTCTTC 3 cut(s) 337, 1066, 1085
BstBAI YACGTR 1 cut(s) 1697
BstBI TTCGAA 1 cut(s) 1255
BstDEI CTNAG 3 cut(s) 710, 946, 1011
BstDSI CCRYGG 3 cut(s) 789, 808, 975
BstF5I GGATG 4 cut(s) 152, 364, 1055, 1222
BstFNI CGCG 3 cut(s) 204, 602, 1326
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 2 cut(s) 23, 530
BstKTI GATC 4 cut(s) 67, 269, 400, 784
BstMAI GTCTC 3 cut(s) 435, 660, 1544
BstMBI GATC 4 cut(s) 64, 266, 397, 781
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 6 cut(s) 27, 86, 359, 473, 720, 1385
BstNI CCWGG 1 cut(s) 114
BstNSI RCATGY 1 cut(s) 1577
BstSCI CCNGG 1 cut(s) 112
BstUI CGCG 3 cut(s) 204, 602, 1326
BstV1I GCAGC 4 cut(s) 340, 463, 1082, 1375
BstV2I GAAGAC 3 cut(s) 314, 803, 1713
BstX2I RGATCY 1 cut(s) 266
BstXI CCANNNNNNTGG 1 cut(s) 1588
BstYI RGATCY 1 cut(s) 266
BstZ17I GTATAC 1 cut(s) 516
Bsu36I CCTNAGG 1 cut(s) 1011
BsuI GTATCC 1 cut(s) 843
BsuRI GGCC 5 cut(s) 228, 447, 588, 1379, 1621
BtgI CCRYGG 3 cut(s) 789, 808, 975
BtgZI GCGATG 1 cut(s) 704
BtrI CACGTC 1 cut(s) 890
BtsCI GGATG 4 cut(s) 152, 364, 1055, 1222
BtsIMutI CAGTG 3 cut(s) 253, 529, 1488
BtuMI TCGCGA 1 cut(s) 1326
BveI ACCTGC 2 cut(s) 608, 1159
CciI TCATGA 1 cut(s) 1683
CfoI GCGC 2 cut(s) 23, 530
Cfr13I GGNCC 1 cut(s) 501
CseI GACGC 1 cut(s) 808
Csp6I GTAC 5 cut(s) 150, 1016, 1395, 1409, 1479
CviQI GTAC 5 cut(s) 150, 1016, 1395, 1409, 1479
DdeI CTNAG 3 cut(s) 710, 946, 1011
DpnI GATC 4 cut(s) 66, 268, 399, 783
DpnII GATC 4 cut(s) 64, 266, 397, 781
DraI TTTAAA 1 cut(s) 669
DriI GACNNNNNGTC 1 cut(s) 1557
EaeI YGGCCR 2 cut(s) 226, 586
Eam1104I CTCTTC 3 cut(s) 337, 1066, 1085
Eam1105I GACNNNNNGTC 1 cut(s) 1557
EarI CTCTTC 3 cut(s) 337, 1066, 1085
Eco130I CCWWGG 1 cut(s) 975
Eco147I AGGCCT 1 cut(s) 1379
Eco47I GGWCC 1 cut(s) 501
Eco47III AGCGCT 1 cut(s) 22
Eco57I CTGAAG 1 cut(s) 1692
Eco72I CACGTG 1 cut(s) 1697
Eco81I CCTNAGG 1 cut(s) 1011
Eco88I CYCGRG 1 cut(s) 1712
EcoRII CCWGG 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 975
ErhI CCWWGG 1 cut(s) 975
Esp3I CGTCTC 1 cut(s) 1544
FalI AAGNNNNNCTT 2 cut(s) 1488, 1520
FaqI GGGAC 1 cut(s) 487
FbaI TGATCA 2 cut(s) 64, 397
FblI GTMKAC 2 cut(s) 515, 1115
Fnu4HI GCNGC 5 cut(s) 354, 448, 477, 1071, 1389
FokI GGATG 4 cut(s) 139, 371, 1042, 1209
Fsp4HI GCNGC 5 cut(s) 354, 448, 477, 1071, 1389
FspBI CTAG 1 cut(s) 1065
GlaI GCGC 2 cut(s) 22, 529
GluI GCNGC 5 cut(s) 354, 448, 477, 1071, 1389
HaeII RGCGCY 1 cut(s) 24
HaeIII GGCC 5 cut(s) 228, 447, 588, 1379, 1621
HapII CCGG 3 cut(s) 270, 645, 1562
HgaI GACGC 1 cut(s) 808
HhaI GCGC 2 cut(s) 23, 530
Hin6I GCGC 2 cut(s) 21, 528
HinP1I GCGC 2 cut(s) 21, 528
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 3 cut(s) 289, 1304, 1663
HpaII CCGG 3 cut(s) 270, 645, 1562
HphI GGTGA 5 cut(s) 125, 407, 535, 1098, 1570
Hpy166II GTNNAC 3 cut(s) 516, 1106, 1116
Hpy188I TCNGA 7 cut(s) 288, 442, 961, 1168, 1309, 1474, 1672
Hpy188III TCNNGA 6 cut(s) 16, 62, 1157, 1301, 1325, 1684
Hpy8I GTNNAC 3 cut(s) 516, 1106, 1116
Hpy99I CGWCG 2 cut(s) 234, 330
HpyAV CCTTC 9 cut(s) 102, 437, 699, 999, 1029, 1104, 1131, 1212, 1422
HpyCH4III ACNGT 6 cut(s) 248, 501, 524, 1172, 1478, 1483
HpyCH4IV ACGT 3 cut(s) 889, 1553, 1696
HpyCH4V TGCA 9 cut(s) 497, 617, 682, 1070, 1090, 1358, 1443, 1604, 1657
HpyF10VI GCNNNNNNNGC 6 cut(s) 27, 86, 359, 473, 720, 1385
HpyF3I CTNAG 3 cut(s) 710, 946, 1011
HpySE526I ACGT 3 cut(s) 889, 1553, 1696
HspAI GCGC 2 cut(s) 21, 528
KpnI GGTACC 2 cut(s) 1019, 1412
Ksp22I TGATCA 2 cut(s) 64, 397
Kzo9I GATC 4 cut(s) 64, 266, 397, 781
LguI GCTCTTC 1 cut(s) 337
LmnI GCTCC 7 cut(s) 104, 367, 1159, 1198, 1222, 1303, 1486
Lsp1109I GCAGC 4 cut(s) 340, 463, 1082, 1375
LweI GCATC 3 cut(s) 349, 539, 1345
MaeI CTAG 1 cut(s) 1065
MaeII ACGT 3 cut(s) 889, 1553, 1696
MaeIII GTNAC 4 cut(s) 383, 534, 885, 1576
MalI GATC 4 cut(s) 66, 268, 399, 783
MboI GATC 4 cut(s) 64, 266, 397, 781
MflI RGATCY 1 cut(s) 266
MlsI TGGCCA 1 cut(s) 588
MluCI AATT 7 cut(s) 418, 559, 659, 670, 938, 1337, 1615
MluNI TGGCCA 1 cut(s) 588
Mox20I TGGCCA 1 cut(s) 588
MroXI GAANNNNTTC 1 cut(s) 915
MscI TGGCCA 1 cut(s) 588
MseI TTAA 5 cut(s) 492, 668, 1185, 1374, 1569
MslI CAYNNNNRTG 1 cut(s) 1350
Msp20I TGGCCA 1 cut(s) 588
MspI CCGG 3 cut(s) 270, 645, 1562
MspR9I CCNGG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 1251
MvaI CCWGG 1 cut(s) 114
MvnI CGCG 3 cut(s) 204, 602, 1326
MwoI GCNNNNNNNGC 6 cut(s) 27, 86, 359, 473, 720, 1385
NcoI CCATGG 1 cut(s) 975
NdeII GATC 4 cut(s) 64, 266, 397, 781
NlaIV GGNNCC 8 cut(s) 100, 124, 268, 503, 643, 1017, 1194, 1410
NmuCI GTSAC 3 cut(s) 534, 885, 1576
NruI TCGCGA 1 cut(s) 1326
NspI RCATGY 1 cut(s) 1577
NspV TTCGAA 1 cut(s) 1255
PagI TCATGA 1 cut(s) 1683
PceI AGGCCT 1 cut(s) 1379
PciSI GCTCTTC 1 cut(s) 337
PctI GAATGC 1 cut(s) 1251
PdmI GAANNNNTTC 1 cut(s) 915
PfeI GAWTC 3 cut(s) 289, 1304, 1663
PflFI GACNNNGTC 1 cut(s) 596
PflMI CCANNNNNTGG 1 cut(s) 317
PkrI GCNGC 5 cut(s) 355, 449, 478, 1072, 1390
PmaCI CACGTG 1 cut(s) 1697
PmlI CACGTG 1 cut(s) 1697
Ppu21I YACGTR 1 cut(s) 1697
PshBI ATTAAT 1 cut(s) 1185
PsiI TTATAA 1 cut(s) 1614
Psp6I CCWGG 1 cut(s) 112
PspCI CACGTG 1 cut(s) 1697
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 8 cut(s) 100, 124, 268, 503, 643, 1017, 1194, 1410
PspPI GGNCC 1 cut(s) 501
PsuI RGATCY 1 cut(s) 266
PsyI GACNNNGTC 1 cut(s) 596
RruI TCGCGA 1 cut(s) 1326
RsaI GTAC 5 cut(s) 151, 1017, 1396, 1410, 1480
RsaNI GTAC 5 cut(s) 150, 1016, 1395, 1409, 1479
RseI CAYNNNNRTG 1 cut(s) 1350
SapI GCTCTTC 1 cut(s) 337
SaqAI TTAA 5 cut(s) 492, 668, 1185, 1374, 1569
SatI GCNGC 5 cut(s) 354, 448, 477, 1071, 1389
Sau3AI GATC 4 cut(s) 64, 266, 397, 781
Sau96I GGNCC 1 cut(s) 501
ScrFI CCNGG 1 cut(s) 114
SfaNI GCATC 3 cut(s) 349, 539, 1345
SfuI TTCGAA 1 cut(s) 1255
SinI GGWCC 1 cut(s) 501
SmiMI CAYNNNNRTG 1 cut(s) 1350
SmlI CTYRAG 1 cut(s) 16
SmoI CTYRAG 1 cut(s) 16
Sse9I AATT 7 cut(s) 418, 559, 659, 670, 938, 1337, 1615
SseBI AGGCCT 1 cut(s) 1379
SsiI CCGC 7 cut(s) 204, 356, 414, 448, 602, 1209, 1465
SspI AATATT 1 cut(s) 379
SspMI CTAG 1 cut(s) 1065
StuI AGGCCT 1 cut(s) 1379
StyD4I CCNGG 1 cut(s) 112
StyI CCWWGG 1 cut(s) 975
TaaI ACNGT 6 cut(s) 248, 501, 524, 1172, 1478, 1483
TaiI ACGT 3 cut(s) 892, 1556, 1699
TaqI TCGA 3 cut(s) 292, 924, 1255
TaqII GACCGA 1 cut(s) 1227
TasI AATT 7 cut(s) 418, 559, 659, 670, 938, 1337, 1615
TauI GCSGC 1 cut(s) 450
TfiI GAWTC 3 cut(s) 289, 1304, 1663
Tru1I TTAA 5 cut(s) 492, 668, 1185, 1374, 1569
Tru9I TTAA 5 cut(s) 492, 668, 1185, 1374, 1569
TscAI CASTG 3 cut(s) 253, 529, 1488
TseFI GTSAC 3 cut(s) 534, 885, 1576
TseI GCWGC 4 cut(s) 353, 476, 1070, 1388
Tsp45I GTSAC 3 cut(s) 534, 885, 1576
TspDTI ATGAA 8 cut(s) 248, 707, 739, 1011, 1086, 1511, 1672, 1700
TspGWI ACGGA 1 cut(s) 825
TspRI CASTG 3 cut(s) 253, 529, 1488
Tth111I GACNNNGTC 1 cut(s) 596
Van91I CCANNNNNTGG 1 cut(s) 317
VpaK11BI GGWCC 1 cut(s) 501
VspI ATTAAT 1 cut(s) 1185
XapI RAATTY 1 cut(s) 670
XceI RCATGY 1 cut(s) 1577
XcmI CCANNNNNNNNNTGG 1 cut(s) 602
XmiI GTMKAC 2 cut(s) 515, 1115
XmnI GAANNNNTTC 1 cut(s) 915
XspI CTAG 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.