pycom11g07360

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
5565451 .. 5566041
591 bp
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UTR
Exon/CDS
Intron
pycom11g07360.2

Sequence Viewer

Length: 291 bp
ATGTTGGTTAGACGGTGCCTGTGTTACTTAATGAGTAACAGGGCAGAAGAAGCTCTTCAAGATGGTGATGAAGCCCTAGCACTAAAGCGTGAATGGCCAACCGCCTTCTATCTTCAAGCGGCTGCCCTAAAGAGCCTAGGGATGGACAATGATGCTGCGGAAATTCTAAGTGTTGGCGCATCCTTGGAAGTAAAGAAACTAGATAAGCTGAGAAGTGAATACTCCGAGGGCTTTGTTACCAATGAGGACGAACAACGAAATAAGATTACTGAATGTTCTCCGGTTGCTTGA

Protein Analysis

97

Amino Acids

10.73

Weight (kDa)

4.71

Isoelectric Point (pI)

65.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024677)

Species Orthologous Gene IDs
pyrus_communis pycom11g07360
rosa_rugosa Rorug05G0384000
rosa_samantha Rh5AG443400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 15
AciI CCGC 3 cut(s) 102, 119, 158
AcoI YGGCCR 1 cut(s) 95
AcsI RAATTY 1 cut(s) 162
AfiI CCNNNNNNNGG 1 cut(s) 142
AgsI TTSAA 2 cut(s) 59, 116
AluBI AGCT 2 cut(s) 53, 208
AluI AGCT 2 cut(s) 53, 208
AoxI GGCC 1 cut(s) 95
ApeKI GCWGC 2 cut(s) 122, 155
ApoI RAATTY 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 54
AspA2I CCTAGG 1 cut(s) 136
AspLEI GCGC 1 cut(s) 179
AsuHPI GGTGA 1 cut(s) 77
AvrII CCTAGG 1 cut(s) 136
BalI TGGCCA 1 cut(s) 97
BanI GGYRCC 1 cut(s) 15
BbvI GCAGC 2 cut(s) 109, 142
BccI CCATC 2 cut(s) 56, 136
BfaI CTAG 3 cut(s) 77, 137, 200
BisI GCNGC 3 cut(s) 120, 123, 156
BlnI CCTAGG 1 cut(s) 136
BlsI GCNGC 3 cut(s) 121, 124, 157
BmiI GGNNCC 1 cut(s) 17
BmsI GCATC 2 cut(s) 142, 188
BsaJI CCNNGG 3 cut(s) 136, 183, 225
BsaWI WCCGGW 1 cut(s) 280
Bsc4I CCNNNNNNNGG 1 cut(s) 142
BseDI CCNNGG 3 cut(s) 136, 183, 225
BseGI GGATG 2 cut(s) 147, 179
BseLI CCNNNNNNNGG 1 cut(s) 142
BseMII CTCAG 1 cut(s) 200
BseXI GCAGC 2 cut(s) 109, 142
BshFI GGCC 1 cut(s) 97
BshNI GGYRCC 1 cut(s) 15
BsiSI CCGG 1 cut(s) 281
BslI CCNNNNNNNGG 1 cut(s) 142
BsnI GGCC 1 cut(s) 97
BspACI CCGC 3 cut(s) 102, 119, 158
BspANI GGCC 1 cut(s) 97
BspCNI CTCAG 1 cut(s) 201
BspLI GGNNCC 1 cut(s) 17
BspQI GCTCTTC 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 15
BssECI CCNNGG 3 cut(s) 136, 183, 225
BssT1I CCWWGG 2 cut(s) 136, 183
Bst4CI ACNGT 1 cut(s) 15
Bst6I CTCTTC 1 cut(s) 60
BstDEI CTNAG 2 cut(s) 167, 209
BstF5I GGATG 2 cut(s) 147, 179
BstHHI GCGC 1 cut(s) 179
BstMWI GCNNNNNNNGC 2 cut(s) 50, 94
BstV1I GCAGC 2 cut(s) 109, 142
BsuRI GGCC 1 cut(s) 97
BtsCI GGATG 2 cut(s) 147, 179
CfoI GCGC 1 cut(s) 179
CviJI RGCY 7 cut(s) 53, 74, 97, 122, 135, 208, 231
CviKI_1 RGCY 7 cut(s) 53, 74, 97, 122, 135, 208, 231
DdeI CTNAG 2 cut(s) 167, 209
EaeI YGGCCR 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 136, 183
EcoT14I CCWWGG 2 cut(s) 136, 183
ErhI CCWWGG 2 cut(s) 136, 183
FalI AAGNNNNNCTT 2 cut(s) 39, 71
Fnu4HI GCNGC 3 cut(s) 120, 123, 156
FokI GGATG 2 cut(s) 154, 166
Fsp4HI GCNGC 3 cut(s) 120, 123, 156
FspBI CTAG 3 cut(s) 77, 137, 200
GlaI GCGC 1 cut(s) 178
GluI GCNGC 3 cut(s) 120, 123, 156
HaeIII GGCC 1 cut(s) 97
HapII CCGG 1 cut(s) 281
HhaI GCGC 1 cut(s) 179
Hin6I GCGC 1 cut(s) 177
HinP1I GCGC 1 cut(s) 177
HpaII CCGG 1 cut(s) 281
HphI GGTGA 1 cut(s) 77
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 59
HpyAV CCTTC 1 cut(s) 115
HpyCH4III ACNGT 1 cut(s) 15
HpyF10VI GCNNNNNNNGC 2 cut(s) 50, 94
HpyF3I CTNAG 2 cut(s) 167, 209
HspAI GCGC 1 cut(s) 177
LguI GCTCTTC 1 cut(s) 60
LpnPI CCDG 2 cut(s) 25, 32
Lsp1109I GCAGC 2 cut(s) 109, 142
LweI GCATC 2 cut(s) 142, 188
MaeI CTAG 3 cut(s) 77, 137, 200
MaeIII GTNAC 3 cut(s) 23, 35, 235
MboII GAAGA 3 cut(s) 47, 59, 104
MlsI TGGCCA 1 cut(s) 97
MluCI AATT 1 cut(s) 162
MluNI TGGCCA 1 cut(s) 97
MnlI CCTC 2 cut(s) 220, 238
Mox20I TGGCCA 1 cut(s) 97
MroXI GAANNNNTTC 1 cut(s) 54
MscI TGGCCA 1 cut(s) 97
MseI TTAA 1 cut(s) 29
Msp20I TGGCCA 1 cut(s) 97
MspI CCGG 1 cut(s) 281
MwoI GCNNNNNNNGC 2 cut(s) 50, 94
NlaIV GGNNCC 1 cut(s) 17
PciSI GCTCTTC 1 cut(s) 60
PdmI GAANNNNTTC 1 cut(s) 54
PkrI GCNGC 3 cut(s) 121, 124, 157
PspN4I GGNNCC 1 cut(s) 17
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 1 cut(s) 29
SatI GCNGC 3 cut(s) 120, 123, 156
SetI ASST 2 cut(s) 55, 210
SfaNI GCATC 2 cut(s) 142, 188
Sse9I AATT 1 cut(s) 162
SsiI CCGC 3 cut(s) 102, 119, 158
SspMI CTAG 3 cut(s) 77, 137, 200
StyI CCWWGG 2 cut(s) 136, 183
TaaI ACNGT 1 cut(s) 15
TasI AATT 1 cut(s) 162
TauI GCSGC 1 cut(s) 122
Tru1I TTAA 1 cut(s) 29
Tru9I TTAA 1 cut(s) 29
TseI GCWGC 2 cut(s) 122, 155
TspDTI ATGAA 1 cut(s) 84
XapI RAATTY 1 cut(s) 162
XmaJI CCTAGG 1 cut(s) 136
XmnI GAANNNNTTC 1 cut(s) 54
XspI CTAG 3 cut(s) 77, 137, 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.