Belongs to the isocitrate and isopropylmalate dehydrogenases family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1097100.v1.1 |
| pyrus_communis | pycom09g14330 pycom12g02830 pycom13g19400 pycom13g28690 pycom15g18780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 367, 404 |
| AccI | GTMKAC | 1 cut(s) | 1202 |
| AccII | CGCG | 1 cut(s) | 1361 |
| AciI | CCGC | 1 cut(s) | 1361 |
| AclWI | GGATC | 1 cut(s) | 1508 |
| AcoI | YGGCCR | 1 cut(s) | 72 |
| AcsI | RAATTY | 6 cut(s) | 31, 254, 325, 521, 905, 1617 |
| AdeI | CACNNNGTG | 1 cut(s) | 196 |
| AfaI | GTAC | 6 cut(s) | 357, 466, 535, 559, 1377, 1416 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 131, 148 |
| AflII | CTTAAG | 1 cut(s) | 1040 |
| AgsI | TTSAA | 9 cut(s) | 37, 63, 146, 238, 489, 497, 574, 824, 1179 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1456 |
| AjnI | CCWGG | 1 cut(s) | 320 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 984, 1016 |
| AluBI | AGCT | 5 cut(s) | 577, 770, 963, 1432, 1522 |
| AluI | AGCT | 5 cut(s) | 577, 770, 963, 1432, 1522 |
| Alw21I | GWGCWC | 1 cut(s) | 1110 |
| AlwI | GGATC | 1 cut(s) | 1508 |
| Ama87I | CYCGRG | 1 cut(s) | 814 |
| AoxI | GGCC | 2 cut(s) | 72, 1362 |
| ApeKI | GCWGC | 3 cut(s) | 56, 211, 1272 |
| ApoI | RAATTY | 6 cut(s) | 31, 254, 325, 521, 905, 1617 |
| AseI | ATTAAT | 1 cut(s) | 726 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 258, 1398 |
| AspLEI | GCGC | 1 cut(s) | 664 |
| AspS9I | GGNCC | 2 cut(s) | 304, 1450 |
| AsuHPI | GGTGA | 5 cut(s) | 188, 551, 712, 1579, 1616 |
| AsuII | TTCGAA | 1 cut(s) | 638 |
| AvaI | CYCGRG | 1 cut(s) | 814 |
| AvaII | GGWCC | 2 cut(s) | 304, 1450 |
| AxyI | CCTNAGG | 1 cut(s) | 1371 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 549, 582, 1075, 1108 |
| BalI | TGGCCA | 1 cut(s) | 74 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 453, 485 |
| Bbv12I | GWGCWC | 1 cut(s) | 1110 |
| BbvI | GCAGC | 3 cut(s) | 43, 223, 1284 |
| BccI | CCATC | 5 cut(s) | 201, 1040, 1211, 1332, 1397 |
| BciT130I | CCWGG | 1 cut(s) | 322 |
| BciVI | GTATCC | 1 cut(s) | 1396 |
| BclI | TGATCA | 2 cut(s) | 720, 1342 |
| BfaI | CTAG | 1 cut(s) | 1577 |
| BfmI | CTRYAG | 1 cut(s) | 1622 |
| BfrI | CTTAAG | 1 cut(s) | 1040 |
| BfuAI | ACCTGC | 2 cut(s) | 367, 404 |
| BfuI | GTATCC | 1 cut(s) | 1396 |
| BisI | GCNGC | 4 cut(s) | 57, 212, 1273, 1362 |
| BlsI | GCNGC | 4 cut(s) | 58, 213, 1274, 1363 |
| Bme1390I | CCNGG | 1 cut(s) | 322 |
| Bme18I | GGWCC | 2 cut(s) | 304, 1450 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1456 |
| BmeT110I | CYCGRG | 1 cut(s) | 814 |
| BmgT120I | GGNCC | 2 cut(s) | 304, 1450 |
| BmrFI | CCNGG | 1 cut(s) | 322 |
| BmsI | GCATC | 3 cut(s) | 175, 496, 766 |
| Bpu14I | TTCGAA | 1 cut(s) | 638 |
| BpuEI | CTTGAG | 2 cut(s) | 295, 1454 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1029, 1242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 36, 66 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 131, 148 |
| Bse1I | ACTGG | 4 cut(s) | 541, 832, 1063, 1138 |
| Bse21I | CCTNAGG | 1 cut(s) | 1371 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1029, 1242 |
| BseBI | CCWGG | 1 cut(s) | 322 |
| BseGI | GGATG | 3 cut(s) | 212, 1051, 1126 |
| BseJI | GATNNNNATC | 2 cut(s) | 1029, 1242 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 131, 148 |
| BseMII | CTCAG | 2 cut(s) | 1261, 1385 |
| BseNI | ACTGG | 4 cut(s) | 541, 832, 1063, 1138 |
| BseXI | GCAGC | 3 cut(s) | 43, 223, 1284 |
| BseYI | CCCAGC | 1 cut(s) | 664 |
| Bsh1236I | CGCG | 1 cut(s) | 1361 |
| Bsh1285I | CGRYCG | 1 cut(s) | 862 |
| BshFI | GGCC | 2 cut(s) | 74, 1364 |
| BsiEI | CGRYCG | 1 cut(s) | 862 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1110 |
| BsiHKCI | CYCGRG | 1 cut(s) | 814 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 131, 148 |
| BsmI | GAATGC | 1 cut(s) | 879 |
| BsnI | GGCC | 2 cut(s) | 74, 1364 |
| BsoBI | CYCGRG | 1 cut(s) | 814 |
| Bsp119I | TTCGAA | 1 cut(s) | 638 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1110 |
| Bsp1407I | TGTACA | 1 cut(s) | 1414 |
| Bsp143I | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| BspACI | CCGC | 1 cut(s) | 1361 |
| BspANI | GGCC | 2 cut(s) | 74, 1364 |
| BspCNI | CTCAG | 2 cut(s) | 1260, 1384 |
| BspFNI | CGCG | 1 cut(s) | 1361 |
| BspHI | TCATGA | 2 cut(s) | 546, 1234 |
| BspMI | ACCTGC | 2 cut(s) | 367, 404 |
| BspPI | GGATC | 1 cut(s) | 1508 |
| BspT104I | TTCGAA | 1 cut(s) | 638 |
| BspTI | CTTAAG | 1 cut(s) | 1040 |
| BsrGI | TGTACA | 1 cut(s) | 1414 |
| BsrI | ACTGG | 4 cut(s) | 541, 832, 1063, 1138 |
| BssMI | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| BssNAI | GTATAC | 1 cut(s) | 1203 |
| Bst1107I | GTATAC | 1 cut(s) | 1203 |
| Bst2UI | CCWGG | 1 cut(s) | 322 |
| Bst4CI | ACNGT | 3 cut(s) | 460, 1172, 1591 |
| BstAFI | CTTAAG | 1 cut(s) | 1040 |
| BstAUI | TGTACA | 1 cut(s) | 1414 |
| BstBI | TTCGAA | 1 cut(s) | 638 |
| BstC8I | GCNNGC | 2 cut(s) | 1019, 1524 |
| BstDEI | CTNAG | 4 cut(s) | 409, 959, 1247, 1371 |
| BstF5I | GGATG | 3 cut(s) | 212, 1051, 1126 |
| BstFNI | CGCG | 1 cut(s) | 1361 |
| BstHHI | GCGC | 1 cut(s) | 664 |
| BstKTI | GATC | 5 cut(s) | 723, 862, 1246, 1345, 1503 |
| BstMBI | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| BstMCI | CGRYCG | 1 cut(s) | 862 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 574, 1014, 1438, 1519 |
| BstNI | CCWGG | 1 cut(s) | 322 |
| BstNSI | RCATGY | 3 cut(s) | 445, 1150, 1313 |
| BstSCI | CCNGG | 1 cut(s) | 320 |
| BstSFI | CTRYAG | 1 cut(s) | 1622 |
| BstUI | CGCG | 1 cut(s) | 1361 |
| BstV1I | GCAGC | 3 cut(s) | 43, 223, 1284 |
| BstX2I | RGATCY | 1 cut(s) | 1500 |
| BstYI | RGATCY | 1 cut(s) | 1500 |
| BstZ17I | GTATAC | 1 cut(s) | 1203 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1371 |
| BsuI | GTATCC | 1 cut(s) | 1396 |
| BsuRI | GGCC | 2 cut(s) | 74, 1364 |
| BtsCI | GGATG | 3 cut(s) | 212, 1051, 1126 |
| BtsIMutI | CAGTG | 1 cut(s) | 1131 |
| BveI | ACCTGC | 2 cut(s) | 367, 404 |
| Cac8I | GCNNGC | 2 cut(s) | 1019, 1524 |
| CciI | TCATGA | 2 cut(s) | 546, 1234 |
| CfoI | GCGC | 1 cut(s) | 664 |
| Cfr13I | GGNCC | 2 cut(s) | 304, 1450 |
| Csp6I | GTAC | 6 cut(s) | 356, 465, 534, 558, 1376, 1415 |
| CviQI | GTAC | 6 cut(s) | 356, 465, 534, 558, 1376, 1415 |
| DdeI | CTNAG | 4 cut(s) | 409, 959, 1247, 1371 |
| DpnI | GATC | 5 cut(s) | 722, 861, 1245, 1344, 1502 |
| DpnII | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| DraIII | CACNNNGTG | 1 cut(s) | 196 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1456 |
| EaeI | YGGCCR | 1 cut(s) | 72 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1456 |
| Eco47I | GGWCC | 2 cut(s) | 304, 1450 |
| Eco81I | CCTNAGG | 1 cut(s) | 1371 |
| Eco88I | CYCGRG | 1 cut(s) | 814 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1450 |
| EcoRI | GAATTC | 1 cut(s) | 254 |
| EcoRII | CCWGG | 1 cut(s) | 320 |
| EcoT22I | ATGCAT | 1 cut(s) | 1311 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 230, 262 |
| FbaI | TGATCA | 2 cut(s) | 720, 1342 |
| FblI | GTMKAC | 1 cut(s) | 1202 |
| Fnu4HI | GCNGC | 4 cut(s) | 57, 212, 1273, 1362 |
| FokI | GGATG | 3 cut(s) | 219, 1058, 1133 |
| Fsp4HI | GCNGC | 4 cut(s) | 57, 212, 1273, 1362 |
| FspBI | CTAG | 1 cut(s) | 1577 |
| GlaI | GCGC | 1 cut(s) | 663 |
| GluI | GCNGC | 4 cut(s) | 57, 212, 1273, 1362 |
| GsaI | CCCAGC | 1 cut(s) | 668 |
| HaeIII | GGCC | 2 cut(s) | 74, 1364 |
| HhaI | GCGC | 1 cut(s) | 664 |
| Hin6I | GCGC | 1 cut(s) | 662 |
| HinP1I | GCGC | 1 cut(s) | 662 |
| HindIII | AAGCTT | 2 cut(s) | 575, 768 |
| HinfI | GANTC | 3 cut(s) | 4, 866, 1256 |
| HphI | GGTGA | 5 cut(s) | 188, 551, 712, 1579, 1616 |
| Hpy166II | GTNNAC | 5 cut(s) | 281, 467, 807, 1203, 1417 |
| Hpy188I | TCNGA | 7 cut(s) | 334, 454, 624, 1198, 1250, 1329, 1347 |
| Hpy8I | GTNNAC | 5 cut(s) | 281, 467, 807, 1203, 1417 |
| HpyAV | CCTTC | 3 cut(s) | 295, 1138, 1463 |
| HpyCH4III | ACNGT | 3 cut(s) | 460, 1172, 1591 |
| HpyCH4V | TGCA | 7 cut(s) | 167, 568, 757, 873, 1139, 1309, 1354 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 574, 1014, 1438, 1519 |
| HpyF3I | CTNAG | 4 cut(s) | 409, 959, 1247, 1371 |
| HspAI | GCGC | 1 cut(s) | 662 |
| Ksp22I | TGATCA | 2 cut(s) | 720, 1342 |
| Kzo9I | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| LmnI | GCTCC | 1 cut(s) | 1519 |
| Lsp1109I | GCAGC | 3 cut(s) | 43, 223, 1284 |
| LweI | GCATC | 3 cut(s) | 175, 496, 766 |
| MaeI | CTAG | 1 cut(s) | 1577 |
| MaeIII | GTNAC | 6 cut(s) | 263, 402, 599, 863, 1091, 1591 |
| MalI | GATC | 5 cut(s) | 722, 861, 1245, 1344, 1502 |
| MboI | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| MboII | GAAGA | 2 cut(s) | 347, 1077 |
| MflI | RGATCY | 1 cut(s) | 1500 |
| MhlI | GDGCHC | 1 cut(s) | 1110 |
| MlsI | TGGCCA | 1 cut(s) | 74 |
| MluNI | TGGCCA | 1 cut(s) | 74 |
| MlyI | GAGTC | 2 cut(s) | 860, 1265 |
| MmeI | TCCRAC | 2 cut(s) | 47, 184 |
| Mox20I | TGGCCA | 1 cut(s) | 74 |
| Mph1103I | ATGCAT | 1 cut(s) | 1311 |
| MroXI | GAANNNNTTC | 2 cut(s) | 258, 1398 |
| MscI | TGGCCA | 1 cut(s) | 74 |
| MseI | TTAA | 8 cut(s) | 155, 350, 593, 726, 1041, 1055, 1338, 1548 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1115 |
| Msp20I | TGGCCA | 1 cut(s) | 74 |
| MspCI | CTTAAG | 1 cut(s) | 1040 |
| MspR9I | CCNGG | 1 cut(s) | 322 |
| Mva1269I | GAATGC | 1 cut(s) | 879 |
| MvaI | CCWGG | 1 cut(s) | 322 |
| MvnI | CGCG | 1 cut(s) | 1361 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 574, 1014, 1438, 1519 |
| NdeII | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| NmuCI | GTSAC | 4 cut(s) | 263, 402, 599, 863 |
| NsiI | ATGCAT | 1 cut(s) | 1311 |
| NspI | RCATGY | 3 cut(s) | 445, 1150, 1313 |
| NspV | TTCGAA | 1 cut(s) | 638 |
| PaeR7I | CTCGAG | 1 cut(s) | 814 |
| PagI | TCATGA | 2 cut(s) | 546, 1234 |
| PctI | GAATGC | 1 cut(s) | 879 |
| PdmI | GAANNNNTTC | 2 cut(s) | 258, 1398 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PfoI | TCCNGGA | 1 cut(s) | 320 |
| PkrI | GCNGC | 4 cut(s) | 58, 213, 1274, 1363 |
| Ple19I | CGATCG | 1 cut(s) | 862 |
| PleI | GAGTC | 2 cut(s) | 860, 1264 |
| PpsI | GAGTC | 2 cut(s) | 860, 1264 |
| PpuMI | RGGWCCY | 1 cut(s) | 1450 |
| PshBI | ATTAAT | 1 cut(s) | 726 |
| Psp5II | RGGWCCY | 1 cut(s) | 1450 |
| Psp6I | CCWGG | 1 cut(s) | 320 |
| PspFI | CCCAGC | 1 cut(s) | 664 |
| PspGI | CCWGG | 1 cut(s) | 320 |
| PspPI | GGNCC | 2 cut(s) | 304, 1450 |
| PspPPI | RGGWCCY | 1 cut(s) | 1450 |
| PsuI | RGATCY | 1 cut(s) | 1500 |
| PvuI | CGATCG | 1 cut(s) | 862 |
| RsaI | GTAC | 6 cut(s) | 357, 466, 535, 559, 1377, 1416 |
| RsaNI | GTAC | 6 cut(s) | 356, 465, 534, 558, 1376, 1415 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SaqAI | TTAA | 8 cut(s) | 155, 350, 593, 726, 1041, 1055, 1338, 1548 |
| SatI | GCNGC | 4 cut(s) | 57, 212, 1273, 1362 |
| Sau3AI | GATC | 5 cut(s) | 720, 859, 1243, 1342, 1500 |
| Sau96I | GGNCC | 2 cut(s) | 304, 1450 |
| SchI | GAGTC | 2 cut(s) | 860, 1265 |
| ScrFI | CCNGG | 1 cut(s) | 322 |
| SduI | GDGCHC | 1 cut(s) | 1110 |
| SfaNI | GCATC | 3 cut(s) | 175, 496, 766 |
| SfcI | CTRYAG | 1 cut(s) | 1622 |
| Sfr274I | CTCGAG | 1 cut(s) | 814 |
| SfuI | TTCGAA | 1 cut(s) | 638 |
| SinI | GGWCC | 2 cut(s) | 304, 1450 |
| SlaI | CTCGAG | 1 cut(s) | 814 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1115 |
| SmlI | CTYRAG | 4 cut(s) | 310, 814, 1040, 1433 |
| SmoI | CTYRAG | 4 cut(s) | 310, 814, 1040, 1433 |
| SsiI | CCGC | 1 cut(s) | 1361 |
| SspMI | CTAG | 1 cut(s) | 1577 |
| StyD4I | CCNGG | 1 cut(s) | 320 |
| TaaI | ACNGT | 3 cut(s) | 460, 1172, 1591 |
| TaqI | TCGA | 9 cut(s) | 342, 384, 638, 815, 858, 1063, 1259, 1392, 1533 |
| TatI | WGTACW | 2 cut(s) | 533, 1414 |
| TauI | GCSGC | 1 cut(s) | 1364 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 8 cut(s) | 155, 350, 593, 726, 1041, 1055, 1338, 1548 |
| Tru9I | TTAA | 8 cut(s) | 155, 350, 593, 726, 1041, 1055, 1338, 1548 |
| TscAI | CASTG | 1 cut(s) | 1138 |
| TseFI | GTSAC | 4 cut(s) | 263, 402, 599, 863 |
| TseI | GCWGC | 3 cut(s) | 56, 211, 1272 |
| Tsp45I | GTSAC | 4 cut(s) | 263, 402, 599, 863 |
| TspDTI | ATGAA | 9 cut(s) | 247, 267, 411, 563, 623, 810, 992, 1127, 1534 |
| TspGWI | ACGGA | 1 cut(s) | 1220 |
| TspRI | CASTG | 1 cut(s) | 1138 |
| Vha464I | CTTAAG | 1 cut(s) | 1040 |
| VpaK11BI | GGWCC | 2 cut(s) | 304, 1450 |
| VspI | ATTAAT | 1 cut(s) | 726 |
| XapI | RAATTY | 6 cut(s) | 31, 254, 325, 521, 905, 1617 |
| XceI | RCATGY | 3 cut(s) | 445, 1150, 1313 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 200 |
| XhoI | CTCGAG | 1 cut(s) | 814 |
| XmiI | GTMKAC | 1 cut(s) | 1202 |
| XmnI | GAANNNNTTC | 2 cut(s) | 258, 1398 |
| XspI | CTAG | 1 cut(s) | 1577 |
| Zsp2I | ATGCAT | 1 cut(s) | 1311 |