pycom12g11000

Phosphoinositide phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
13079058 .. 13079919
862 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 213 bp
ATGGCATTCGGCAGGATGCTATGGATCTTATCAGTGGCCGCTATACAGTTAGCACCATCCCGGGCTGAGTCTTTTTCTTATCTACCTGTGGCATCAGCTTTACTAATCGGAGGGTTGACTTCCGTCACACTTCAGCAAGCAGGTCGAAATGCCCAACAGTATGTCTTCTGTTCTTTGTGCTGGAGTGACTGCTGGAGTAGCGGCAGCAGTTAA

Protein Analysis

71

Amino Acids

7.5

Weight (kDa)

7.72

Isoelectric Point (pI)

57.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022403)

Species Orthologous Gene IDs
malus_domestica MD04G1157300.v1.1 MD12G1169200.v1.1 MD12G1171000.v1.1
pyrus_communis pycom12g11000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 131
AciI CCGC 2 cut(s) 39, 201
AclWI GGATC 1 cut(s) 32
AcoI YGGCCR 1 cut(s) 36
AcuI CTGAAG 1 cut(s) 116
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
AlwI GGATC 1 cut(s) 32
Ama87I CYCGRG 1 cut(s) 60
AoxI GGCC 1 cut(s) 36
ApeKI GCWGC 1 cut(s) 204
AsuC2I CCSGG 2 cut(s) 61, 62
AvaI CYCGRG 1 cut(s) 60
BbsI GAAGAC 1 cut(s) 157
BccI CCATC 1 cut(s) 64
BcgI CGANNNNNNTGC 2 cut(s) 125, 159
BcnI CCSGG 2 cut(s) 61, 62
BfuAI ACCTGC 1 cut(s) 131
BisI GCNGC 3 cut(s) 39, 202, 205
BlsI GCNGC 3 cut(s) 40, 203, 206
Bme1390I CCNGG 2 cut(s) 61, 62
BmeT110I CYCGRG 1 cut(s) 60
BmrFI CCNGG 2 cut(s) 61, 62
BmsI GCATC 2 cut(s) 6, 101
BoxI GACNNNNGTC 1 cut(s) 122
BpiI GAAGAC 1 cut(s) 157
BpmI CTGGAG 1 cut(s) 202
BpuMI CCSGG 2 cut(s) 61, 62
BsaJI CCNNGG 1 cut(s) 60
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 2 cut(s) 21, 56
BseMII CTCAG 1 cut(s) 57
BshFI GGCC 1 cut(s) 38
BsiHKCI CYCGRG 1 cut(s) 60
BsiSI CCGG 1 cut(s) 61
BsmI GAATGC 1 cut(s) 5
BsnI GGCC 1 cut(s) 38
BsoBI CYCGRG 1 cut(s) 60
Bsp143I GATC 1 cut(s) 24
BspACI CCGC 2 cut(s) 39, 201
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 58
BspMI ACCTGC 1 cut(s) 131
BspPI GGATC 1 cut(s) 32
BssECI CCNNGG 1 cut(s) 60
BssMI GATC 1 cut(s) 24
Bst4CI ACNGT 2 cut(s) 48, 159
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 1 cut(s) 66
BstF5I GGATG 2 cut(s) 21, 56
BstKTI GATC 1 cut(s) 27
BstMBI GATC 1 cut(s) 24
BstMWI GCNNNNNNNGC 1 cut(s) 198
BstPAI GACNNNNGTC 1 cut(s) 122
BstSCI CCNGG 2 cut(s) 59, 60
BstV2I GAAGAC 1 cut(s) 157
BstX2I RGATCY 1 cut(s) 24
BstYI RGATCY 1 cut(s) 24
BsuRI GGCC 1 cut(s) 38
BtsCI GGATG 2 cut(s) 21, 56
BtsIMutI CAGTG 1 cut(s) 39
BveI ACCTGC 1 cut(s) 131
Cac8I GCNNGC 1 cut(s) 138
Cfr9I CCCGGG 1 cut(s) 60
CviJI RGCY 3 cut(s) 38, 65, 98
CviKI_1 RGCY 3 cut(s) 38, 65, 98
DdeI CTNAG 1 cut(s) 66
DpnI GATC 1 cut(s) 26
DpnII GATC 1 cut(s) 24
EaeI YGGCCR 1 cut(s) 36
Eco57I CTGAAG 1 cut(s) 116
Eco88I CYCGRG 1 cut(s) 60
FaiI YATR 3 cut(s) 22, 44, 162
Fnu4HI GCNGC 3 cut(s) 39, 202, 205
FokI GGATG 2 cut(s) 28, 43
Fsp4HI GCNGC 3 cut(s) 39, 202, 205
GluI GCNGC 3 cut(s) 39, 202, 205
GsuI CTGGAG 1 cut(s) 202
HaeIII GGCC 1 cut(s) 38
HapII CCGG 1 cut(s) 61
HincII GTYRAC 1 cut(s) 117
HindII GTYRAC 1 cut(s) 117
HinfI GANTC 1 cut(s) 68
HpaII CCGG 1 cut(s) 61
Hpy166II GTNNAC 1 cut(s) 117
Hpy188I TCNGA 1 cut(s) 110
Hpy8I GTNNAC 1 cut(s) 117
HpyCH4III ACNGT 2 cut(s) 48, 159
HpyF10VI GCNNNNNNNGC 1 cut(s) 198
HpyF3I CTNAG 1 cut(s) 66
Kzo9I GATC 1 cut(s) 24
LpnPI CCDG 5 cut(s) 74, 99, 126, 166, 178
LweI GCATC 2 cut(s) 6, 101
MaeIII GTNAC 2 cut(s) 124, 185
MalI GATC 1 cut(s) 26
MboI GATC 1 cut(s) 24
MboII GAAGA 1 cut(s) 157
MflI RGATCY 1 cut(s) 24
MlyI GAGTC 1 cut(s) 77
MnlI CCTC 1 cut(s) 104
MseI TTAA 1 cut(s) 211
MspI CCGG 1 cut(s) 61
MspR9I CCNGG 2 cut(s) 61, 62
Mva1269I GAATGC 1 cut(s) 5
MwoI GCNNNNNNNGC 1 cut(s) 198
NciI CCSGG 2 cut(s) 61, 62
NdeII GATC 1 cut(s) 24
NmuCI GTSAC 2 cut(s) 124, 185
PctI GAATGC 1 cut(s) 5
PkrI GCNGC 3 cut(s) 40, 203, 206
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PshAI GACNNNNGTC 1 cut(s) 122
PsuI RGATCY 1 cut(s) 24
SaqAI TTAA 1 cut(s) 211
SatI GCNGC 3 cut(s) 39, 202, 205
Sau3AI GATC 1 cut(s) 24
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 2 cut(s) 61, 62
SetI ASST 3 cut(s) 88, 100, 145
SfaNI GCATC 2 cut(s) 6, 101
SgeI CNNG 9 cut(s) 25, 72, 73, 74, 98, 149, 153, 193, 205
SmaI CCCGGG 1 cut(s) 62
SsiI CCGC 2 cut(s) 39, 201
StyD4I CCNGG 2 cut(s) 59, 60
TaaI ACNGT 2 cut(s) 48, 159
TaqI TCGA 1 cut(s) 145
TauI GCSGC 2 cut(s) 41, 204
Tru1I TTAA 1 cut(s) 211
Tru9I TTAA 1 cut(s) 211
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 2 cut(s) 124, 185
TseI GCWGC 1 cut(s) 204
Tsp45I GTSAC 2 cut(s) 124, 185
TspGWI ACGGA 1 cut(s) 112
TspMI CCCGGG 1 cut(s) 60
TspRI CASTG 1 cut(s) 39
XmaI CCCGGG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.