Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0011809

Physical Location & Seq

Genomic Coordinates Reverse (-)

5171985 .. 5175773

Gene Structure 3789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g07820.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGGTTTCGTTTTCTCTCTCCAATCTGAAGCAAAAAATGGCTCTGCTCGATCACTGAGTCCACCCGCCATGGATCAGGAAACTGGGGTTTGTCAAAACCATATAAAGAAACAATCATGGAGGACAATTCTGACTCTGGCTTACCAGAGCCTCGGCGTCGTCTATGGCGATTTGAGCACTTCGCCTCTGTACGTTTACAAAAGCACATTTGCTGAAGATATCGAGTACTCAGAGACCAACGAAGAAATCTTCGGCGTCTTGTCCTTCGTATTCTGGACTCTCACCCTCATCCCCCTTCTCAAGTACGTGTTTATTGTGCTCAAAGCAGACGACAATGGCGAAGGAGGAACATTCGCCTTGTACTCGCTGCTGTGTCGACACGCCCGAGTCAGCTCGCTGCCCAACAGCCAGTCTGCCGACGAGGAGCTCTCCGATTACAAGAAGGAAAGAGCCGGGACGGCGCTGCAGTCGAGCTTCGGGTCGAGGTTGAAGTCGACTCTGGAGAGGCACAAGGTGCTGCAGAGATTTTTGCTTGTTCTTGCTTTGATTGGAACTTGCATGGTGATTGGTGACGGTGTTCTCACGCCGGCTATTTCTGTTTTTTCTGCGGTTTCAGGGCTTGAGCTTTCCATGTCCGAAAAGCATCACAAATATGTAGAAGTTCCAGTTGCATGCGTCATTTTGATAGGCCTGTTTGCACTTCAACATTATGGAACTCACAGGGTCGGGTTCTTGTTTGCTCCTGTAGTTCTGATATGGCTTCTATGCATCAGTGCGATCGGTGTTTATAATATACTTCACTTCAATCCGTGTGTGTACAAAGCACTTTCTCCATACTATATGTACAAATTTTTAAAGAAAACTCAGAAAGGGGGCTGGATGTCCCTTGGCGGAATTCTGTTGTGTATAACAGGTTCAGAAGCCATGTTTGCTGATCTTGGACACTTTACACAATTGTCCATTCAGATTGCGTTCACCTCTTTGGTTTATCCAGCTTTGGTTCTAGCATATATGGGACAAGCTGCCTGTATATCTTCACATCACAATGTTGGGAAAAATTCTCAGATTGGATTTTACCCATCTGTACCAGGTTTTGCAGTTATCTCAGTGATGCTGGTCACCACGTGCTTAATGTCCCTAGTTATTGTCCTATGCTGGCAGCAGAGTGTCTTTGTTGCAATTGGCTTTGTGGTCTTTTTCGGCACAATTGAAGCTCTTTACTTCTCAGCTTCTCTTGTAAAGTTTCCTGAAGGAGCCTGGGTTCCTGTTGCTCTTGCTCTCTGTTTTTTCTTCGTCATGTACGTTTGGCACTACGGCACAATTAAAAAGTACGAGTTTGAAGTCCAAAACAAGGTCTCCATTAACTGGCTGCTTAGCCTTGGTCCCAGCCTTGGCATTGTACGAGTCCGTGGGATTGGCCTCATACACACCGATCTTGTATCTGGAATTCCGGCAATCTTCTCCCACTTTGTCACCAACCTTCCGGCCTTCCACCAGGTCCTAGTTTTCCTCTGCATCAAATCTGTCCCAGTCCCCCATGTTAGACCCGAGGAACGGTTTCTAGTGGGTCAAATCGGCCCAAAAGAGTATCGGCTCTATAGGTGCATTGTGAGATATGGATATCGCGATGTTCACAAAGATGACATGGAGTTTGAGAATGATCTTATGTGTAGCATAGCAGAGTTCATACGCTCAGGAGGCACTGAATTCACTGTTGCAGTTGAAGATGCGGGCAAGGAAGATGATAAAATGACGGTAGTTGGCACACGCTCCACTCATGCAGATGGGATTCAGATGAGCGAGGACATCAACGTGGAAATGAGCCCATCAGGGCAGATAGAAATAAGATCTCCGCCAGTGGCTCAACGAAGGAAGAAGGTAAGATTCATTGTTCCGGAGAGTCCAAAGATCAACACGGGCACAAGGGAGGAACTGCAGGAGCTAATGGAAGCTCGGGAAGCTGGAATAGTGTACATAGTTGGGAACACATACACGAATGCAAAGAAAGGATCTAGTTTCATGAGAAGGTTTGCAATCAACTACGGATATGAATTCTTGAGAAGGAATAGCAGGAAATCCAGTTATGCACTCAGTGTACCGCATGCGTCCGCGCTGGAGGTAGGGATGATTTACCATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

714

Amino Acids

79.43

Weight (kDa)

8.24

Isoelectric Point (pI)

48.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70300
fragaria_vesca	FvH4_4g34790 FvH4_4g34790
malus_domestica	MD13G1089700.v1.1 MD16G1089900.v1.1 MD16G1090000.v1.1
prunus_persica	Prupe.1G256100_v2.0.a1
pyrus_communis	pycom13g07820 pycom16g07700
rosa_chinensis	RchiOBHm_Chr4g0444131
rosa_laevigata	RLG00000005853
rosa_multiflora	Rmu_sc0012638.1_g000009
rosa_roxburghii	Rroxscaffold_5G00384720
rosa_rugosa	Rorug04G0350300
rosa_samantha	Rh4AG410900 Rh4BG422300 Rh4CG436700 Rh4DG417600
rosa_wichuraiana	Rw4G035300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	789
AccB7I	CCANNNNNTGG	1 cut(s)	1365
AccI	GTMKAC	2 cut(s)	376, 494
AccII	CGCG	2 cut(s)	1626, 2111
AccIII	TCCGGA	1 cut(s)	1894
AciI	CCGC	7 cut(s)	66, 608, 891, 1730, 1853, 2099, 2109
AclWI	GGATC	2 cut(s)	81, 2017
AcsI	RAATTY	6 cut(s)	848, 894, 1057, 1446, 1706, 2051
AcuI	CTGAAG	3 cut(s)	48, 234, 1269
AcvI	CACGTG	1 cut(s)	1125
AcyI	GRCGYC	2 cut(s)	156, 255
AdeI	CACNNNGTG	3 cut(s)	514, 1125, 2093
AfiI	CCNNNNNNNGG	4 cut(s)	1351, 1365, 1391, 1554
AflIII	ACRYGT	1 cut(s)	306
AgsI	TTSAA	6 cut(s)	490, 704, 805, 1211, 1340, 1724
AjnI	CCWGG	3 cut(s)	1087, 1256, 1494
AloI	GAACNNNNNNTCC	2 cut(s)	1245, 1277
Alw21I	GWGCWC	3 cut(s)	179, 321, 429
Alw26I	GTCTC	2 cut(s)	227, 1360
AlwI	GGATC	2 cut(s)	81, 2017
Ama87I	CYCGRG	3 cut(s)	384, 1547, 1953
Aor13HI	TCCGGA	1 cut(s)	1894
AoxI	GGCC	4 cut(s)	688, 1417, 1485, 1576
ApeKI	GCWGC	7 cut(s)	367, 397, 463, 517, 1022, 1159, 1369
ApoI	RAATTY	6 cut(s)	848, 894, 1057, 1446, 1706, 2051
ArsI	GACNNNNNNTTYG	2 cut(s)	1634, 1666
Asp700I	GAANNNNTTC	1 cut(s)	1557
AspLEI	GCGC	2 cut(s)	463, 2113
AspS9I	GGNCC	3 cut(s)	1382, 1498, 1577
AsuC2I	CCSGG	1 cut(s)	454
AsuHPI	GGTGA	6 cut(s)	274, 574, 581, 967, 1111, 1465
AvaI	CYCGRG	3 cut(s)	384, 1547, 1953
AvaII	GGWCC	2 cut(s)	1382, 1498
BaeGI	GKGCMC	1 cut(s)	1922
BanII	GRGCYC	2 cut(s)	429, 1826
BbrPI	CACGTG	1 cut(s)	1125
Bbv12I	GWGCWC	3 cut(s)	179, 321, 429
BbvI	GCAGC	7 cut(s)	354, 384, 450, 504, 1009, 1171, 1356
BccI	CCATC	3 cut(s)	1087, 1778, 1834
BceAI	ACGGC	2 cut(s)	474, 1330
BciT130I	CCWGG	3 cut(s)	1089, 1258, 1496
BcnI	CCSGG	1 cut(s)	454
BcoDI	GTCTC	2 cut(s)	227, 1360
BfaI	CTAG	5 cut(s)	1004, 1139, 1502, 1562, 2013
BfmI	CTRYAG	5 cut(s)	464, 518, 744, 1597, 1934
BfoI	RGCGCY	1 cut(s)	464
BglI	GCCNNNNNGGC	1 cut(s)	458
BglII	AGATCT	1 cut(s)	1847
BisI	GCNGC	7 cut(s)	368, 398, 464, 518, 1023, 1160, 1370
BlpI	GCTNAGC	1 cut(s)	1373
BlsI	GCNGC	7 cut(s)	369, 399, 465, 519, 1024, 1161, 1371
BmcAI	AGTACT	1 cut(s)	227
Bme1390I	CCNGG	4 cut(s)	454, 1089, 1258, 1496
Bme18I	GGWCC	2 cut(s)	1382, 1498
BmeT110I	CYCGRG	3 cut(s)	384, 1547, 1953
BmgT120I	GGNCC	3 cut(s)	1382, 1498, 1577
BmiI	GGNNCC	3 cut(s)	1255, 1263, 1384
BmrFI	CCNGG	4 cut(s)	454, 1089, 1258, 1496
BmrI	ACTGGG	2 cut(s)	93, 1523
BmsI	GCATC	5 cut(s)	652, 777, 1101, 1524, 1717
BmuI	ACTGGG	2 cut(s)	93, 1523
BplI	GAGNNNNNCTC	2 cut(s)	413, 445
BpmI	CTGGAG	2 cut(s)	521, 2135
Bpu10I	CCTNAGC	1 cut(s)	1693
Bpu1102I	GCTNAGC	1 cut(s)	1373
BpuEI	CTTGAG	3 cut(s)	284, 641, 2077
BpuMI	CCSGG	1 cut(s)	454
BsaAI	YACGTR	2 cut(s)	307, 1125
BsaHI	GRCGYC	2 cut(s)	156, 255
BsaI	GGTCTC	2 cut(s)	227, 1360
BsaJI	CCNNGG	8 cut(s)	69, 151, 886, 1257, 1378, 1390, 1408, 1548
BsaWI	WCCGGW	1 cut(s)	1894
BsaXI	ACNNNNNCTCC	4 cut(s)	1245, 1275, 1340, 1370
Bsc4I	CCNNNNNNNGG	4 cut(s)	1351, 1365, 1391, 1554
Bse118I	RCCGGY	1 cut(s)	586
Bse1I	ACTGG	7 cut(s)	88, 409, 665, 1370, 1529, 1856, 2079
BseAI	TCCGGA	1 cut(s)	1894
BseBI	CCWGG	3 cut(s)	1089, 1258, 1496
BseDI	CCNNGG	8 cut(s)	69, 151, 886, 1257, 1378, 1390, 1408, 1548
BseGI	GGATG	3 cut(s)	288, 885, 2130
BseLI	CCNNNNNNNGG	4 cut(s)	1351, 1365, 1391, 1554
BseMII	CTCAG	8 cut(s)	47, 243, 878, 1076, 1119, 1239, 1707, 2104
BseNI	ACTGG	7 cut(s)	88, 409, 665, 1370, 1529, 1856, 2079
BseRI	GAGGAG	1 cut(s)	437
BseSI	GKGCMC	1 cut(s)	1922
BseXI	GCAGC	7 cut(s)	354, 384, 450, 504, 1009, 1171, 1356
BseYI	CCCAGC	1 cut(s)	1385
Bsh1236I	CGCG	2 cut(s)	1626, 2111
Bsh1285I	CGRYCG	1 cut(s)	780
BshFI	GGCC	4 cut(s)	690, 1419, 1487, 1578
BsiEI	CGRYCG	1 cut(s)	780
BsiHKAI	GWGCWC	3 cut(s)	179, 321, 429
BsiHKCI	CYCGRG	3 cut(s)	384, 1547, 1953
BsiSI	CCGG	5 cut(s)	453, 587, 1451, 1484, 1895
BslFI	GGGAC	7 cut(s)	469, 868, 1029, 1120, 1368, 1511, 1517
BslI	CCNNNNNNNGG	4 cut(s)	1351, 1365, 1391, 1554
BsmAI	GTCTC	2 cut(s)	227, 1360
BsmFI	GGGAC	7 cut(s)	469, 868, 1029, 1120, 1368, 1511, 1517
BsmI	GAATGC	1 cut(s)	2002
BsnI	GGCC	4 cut(s)	690, 1419, 1487, 1578
Bso31I	GGTCTC	2 cut(s)	227, 1360
BsoBI	CYCGRG	3 cut(s)	384, 1547, 1953
Bsp1286I	GDGCHC	5 cut(s)	179, 321, 429, 1826, 1922
Bsp13I	TCCGGA	1 cut(s)	1894
Bsp1407I	TGTACA	3 cut(s)	816, 843, 1971
Bsp143I	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
Bsp1720I	GCTNAGC	1 cut(s)	1373
Bsp19I	CCATGG	1 cut(s)	69
Bsp68I	TCGCGA	1 cut(s)	1626
BspACI	CCGC	7 cut(s)	66, 608, 891, 1730, 1853, 2099, 2109
BspANI	GGCC	4 cut(s)	690, 1419, 1487, 1578
BspCNI	CTCAG	8 cut(s)	48, 242, 877, 1075, 1118, 1238, 1706, 2103
BspEI	TCCGGA	1 cut(s)	1894
BspFNI	CGCG	2 cut(s)	1626, 2111
BspHI	TCATGA	1 cut(s)	2019
BspLI	GGNNCC	3 cut(s)	1255, 1263, 1384
BspMAI	CTGCAG	3 cut(s)	468, 522, 1938
BspPI	GGATC	2 cut(s)	81, 2017
BspTNI	GGTCTC	2 cut(s)	227, 1360
BsrFI	RCCGGY	1 cut(s)	586
BsrGI	TGTACA	3 cut(s)	816, 843, 1971
BsrI	ACTGG	7 cut(s)	88, 409, 665, 1370, 1529, 1856, 2079
BssAI	RCCGGY	1 cut(s)	586
BssECI	CCNNGG	8 cut(s)	69, 151, 886, 1257, 1378, 1390, 1408, 1548
BssMI	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
BssNI	GRCGYC	2 cut(s)	156, 255
BssT1I	CCWWGG	4 cut(s)	69, 886, 1378, 1390
Bst2UI	CCWGG	3 cut(s)	1089, 1258, 1496
Bst4CI	ACNGT	4 cut(s)	575, 1557, 1714, 1756
BstACI	GRCGYC	2 cut(s)	156, 255
BstAPI	GCANNNNNTGC	1 cut(s)	514
BstAUI	TGTACA	3 cut(s)	816, 843, 1971
BstBAI	YACGTR	2 cut(s)	307, 1125
BstC8I	GCNNGC	6 cut(s)	395, 588, 673, 1157, 1732, 2103
BstDEI	CTNAG	9 cut(s)	56, 229, 864, 1062, 1105, 1225, 1373, 1693, 2090
BstDSI	CCRYGG	2 cut(s)	69, 1408
BstEII	GGTNACC	1 cut(s)	1117
BstF5I	GGATG	3 cut(s)	288, 885, 2130
BstFNI	CGCG	2 cut(s)	1626, 2111
BstH2I	RGCGCY	1 cut(s)	464
BstHHI	GCGC	2 cut(s)	463, 2113
BstKTI	GATC	9 cut(s)	53, 76, 780, 937, 1435, 1663, 1850, 1911, 2012
BstMAI	GTCTC	2 cut(s)	227, 1360
BstMBI	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
BstMCI	CGRYCG	1 cut(s)	780
BstMWI	GCNNNNNNNGC	6 cut(s)	174, 458, 514, 929, 1698, 1958
BstNI	CCWGG	3 cut(s)	1089, 1258, 1496
BstNSI	RCATGY	2 cut(s)	675, 2105
BstPI	GGTNACC	1 cut(s)	1117
BstSCI	CCNGG	4 cut(s)	452, 1087, 1256, 1494
BstSFI	CTRYAG	5 cut(s)	464, 518, 744, 1597, 1934
BstSLI	GKGCMC	1 cut(s)	1922
BstUI	CGCG	2 cut(s)	1626, 2111
BstV1I	GCAGC	7 cut(s)	354, 384, 450, 504, 1009, 1171, 1356
BstX2I	RGATCY	2 cut(s)	1847, 2009
BstYI	RGATCY	2 cut(s)	1847, 2009
BsuRI	GGCC	4 cut(s)	690, 1419, 1487, 1578
BtgI	CCRYGG	2 cut(s)	69, 1408
BtgZI	GCGATG	1 cut(s)	1641
BtsCI	GGATG	3 cut(s)	288, 885, 2130
BtsIMutI	CAGTG	7 cut(s)	53, 778, 1113, 1701, 1710, 1863, 2098
BtuMI	TCGCGA	1 cut(s)	1626
Cac8I	GCNNGC	6 cut(s)	395, 588, 673, 1157, 1732, 2103
CciI	TCATGA	1 cut(s)	2019
CfoI	GCGC	2 cut(s)	463, 2113
Cfr10I	RCCGGY	1 cut(s)	586
Cfr13I	GGNCC	3 cut(s)	1382, 1498, 1577
CseI	GACGC	4 cut(s)	145, 244, 664, 2094
CsiI	ACCWGGT	2 cut(s)	1087, 1494
DdeI	CTNAG	9 cut(s)	56, 229, 864, 1062, 1105, 1225, 1373, 1693, 2090
DpnI	GATC	9 cut(s)	52, 75, 779, 936, 1434, 1662, 1849, 1910, 2011
DpnII	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
DraI	TTTAAA	1 cut(s)	855
DraIII	CACNNNGTG	3 cut(s)	514, 1125, 2093
EciI	GGCGGA	2 cut(s)	906, 1842
Ecl136II	GAGCTC	1 cut(s)	427
Eco130I	CCWWGG	4 cut(s)	69, 886, 1378, 1390
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	2 cut(s)	429, 1826
Eco31I	GGTCTC	2 cut(s)	227, 1360
Eco32I	GATATC	2 cut(s)	220, 1622
Eco47I	GGWCC	2 cut(s)	1382, 1498
Eco53kI	GAGCTC	1 cut(s)	427
Eco57I	CTGAAG	3 cut(s)	48, 234, 1269
Eco72I	CACGTG	1 cut(s)	1125
Eco88I	CYCGRG	3 cut(s)	384, 1547, 1953
Eco91I	GGTNACC	1 cut(s)	1117
EcoICRI	GAGCTC	1 cut(s)	427
EcoO109I	RGGNCCY	1 cut(s)	1498
EcoO65I	GGTNACC	1 cut(s)	1117
EcoRI	GAATTC	4 cut(s)	894, 1446, 1706, 2051
EcoRII	CCWGG	3 cut(s)	1087, 1256, 1494
EcoRV	GATATC	2 cut(s)	220, 1622
EcoT14I	CCWWGG	4 cut(s)	69, 886, 1378, 1390
EcoT22I	ATGCAT	1 cut(s)	770
EcoT38I	GRGCYC	2 cut(s)	429, 1826
ErhI	CCWWGG	4 cut(s)	69, 886, 1378, 1390
FaqI	GGGAC	7 cut(s)	469, 868, 1029, 1120, 1368, 1511, 1517
FauI	CCCGC	2 cut(s)	73, 1723
FblI	GTMKAC	2 cut(s)	376, 494
Fnu4HI	GCNGC	7 cut(s)	368, 398, 464, 518, 1023, 1160, 1370
FokI	GGATG	3 cut(s)	275, 892, 2137
FriOI	GRGCYC	2 cut(s)	429, 1826
Fsp4HI	GCNGC	7 cut(s)	368, 398, 464, 518, 1023, 1160, 1370
FspBI	CTAG	5 cut(s)	1004, 1139, 1502, 1562, 2013
GlaI	GCGC	2 cut(s)	462, 2112
GluI	GCNGC	7 cut(s)	368, 398, 464, 518, 1023, 1160, 1370
GsaI	CCCAGC	1 cut(s)	1389
GsuI	CTGGAG	2 cut(s)	521, 2135
HaeII	RGCGCY	1 cut(s)	464
HaeIII	GGCC	4 cut(s)	690, 1419, 1487, 1578
HapII	CCGG	5 cut(s)	453, 587, 1451, 1484, 1895
HgaI	GACGC	4 cut(s)	145, 244, 664, 2094
HhaI	GCGC	2 cut(s)	463, 2113
Hin1I	GRCGYC	2 cut(s)	156, 255
Hin6I	GCGC	2 cut(s)	461, 2111
HinP1I	GCGC	2 cut(s)	461, 2111
HincII	GTYRAC	2 cut(s)	377, 495
HindII	GTYRAC	2 cut(s)	377, 495
HinfI	GANTC	9 cut(s)	58, 133, 277, 387, 496, 1404, 1789, 1884, 1900
HpaII	CCGG	5 cut(s)	453, 587, 1451, 1484, 1895
HphI	GGTGA	6 cut(s)	274, 574, 581, 967, 1111, 1465
Hpy166II	GTNNAC	9 cut(s)	62, 196, 377, 495, 817, 975, 1633, 1972, 2096
Hpy8I	GTNNAC	9 cut(s)	62, 196, 377, 495, 817, 975, 1633, 1972, 2096
Hpy99I	CGWCG	2 cut(s)	161, 422
HpyCH4III	ACNGT	4 cut(s)	575, 1557, 1714, 1756
HpyCH4IV	ACGT	5 cut(s)	192, 306, 1124, 1302, 1812
HpyF10VI	GCNNNNNNNGC	6 cut(s)	174, 458, 514, 929, 1698, 1958
HpyF3I	CTNAG	9 cut(s)	56, 229, 864, 1062, 1105, 1225, 1373, 1693, 2090
HpySE526I	ACGT	5 cut(s)	192, 306, 1124, 1302, 1812
Hsp92I	GRCGYC	2 cut(s)	156, 255
HspAI	GCGC	2 cut(s)	461, 2111
Kpn2I	TCCGGA	1 cut(s)	1894
KroI	GCCGGC	1 cut(s)	586
KroNI	GCCGGC	1 cut(s)	588
Kzo9I	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
LmnI	GCTCC	5 cut(s)	424, 745, 1253, 1775, 1939
Lsp1109I	GCAGC	7 cut(s)	354, 384, 450, 504, 1009, 1171, 1356
LweI	GCATC	5 cut(s)	652, 777, 1101, 1524, 1717
MabI	ACCWGGT	2 cut(s)	1087, 1494
MaeI	CTAG	5 cut(s)	1004, 1139, 1502, 1562, 2013
MaeII	ACGT	5 cut(s)	192, 306, 1124, 1302, 1812
MaeIII	GTNAC	3 cut(s)	569, 1117, 1471
MalI	GATC	9 cut(s)	52, 75, 779, 936, 1434, 1662, 1849, 1910, 2011
MboI	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
MboII	GAAGA	9 cut(s)	227, 241, 254, 1026, 1282, 1450, 1736, 1751, 1885
MfeI	CAATTG	3 cut(s)	953, 1179, 1206
MflI	RGATCY	2 cut(s)	1847, 2009
MhlI	GDGCHC	5 cut(s)	179, 321, 429, 1826, 1922
MlyI	GAGTC	7 cut(s)	67, 127, 271, 396, 490, 1413, 1909
Mph1103I	ATGCAT	1 cut(s)	770
MroI	TCCGGA	1 cut(s)	1894
MroNI	GCCGGC	1 cut(s)	586
MroXI	GAANNNNTTC	1 cut(s)	1557
MseI	TTAA	4 cut(s)	854, 1130, 1323, 1362
MslI	CAYNNNNRTG	5 cut(s)	651, 1044, 1638, 1782, 1811
MspI	CCGG	5 cut(s)	453, 587, 1451, 1484, 1895
MspR9I	CCNGG	4 cut(s)	454, 1089, 1258, 1496
MunI	CAATTG	3 cut(s)	953, 1179, 1206
Mva1269I	GAATGC	1 cut(s)	2002
MvaI	CCWGG	3 cut(s)	1089, 1258, 1496
MvnI	CGCG	2 cut(s)	1626, 2111
MwoI	GCNNNNNNNGC	6 cut(s)	174, 458, 514, 929, 1698, 1958
NaeI	GCCGGC	1 cut(s)	588
NciI	CCSGG	1 cut(s)	454
NcoI	CCATGG	1 cut(s)	69
NdeII	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
NgoMIV	GCCGGC	1 cut(s)	586
NlaIV	GGNNCC	3 cut(s)	1255, 1263, 1384
NmeAIII	GCCGAG	1 cut(s)	132
NmuCI	GTSAC	3 cut(s)	569, 1117, 1471
NruI	TCGCGA	1 cut(s)	1626
NsiI	ATGCAT	1 cut(s)	770
NspI	RCATGY	2 cut(s)	675, 2105
PaeI	GCATGC	2 cut(s)	675, 2105
PagI	TCATGA	1 cut(s)	2019
PceI	AGGCCT	1 cut(s)	690
PcsI	WCGNNNNNNNCGW	4 cut(s)	165, 336, 382, 1299
PctI	GAATGC	1 cut(s)	2002
PdiI	GCCGGC	1 cut(s)	588
PdmI	GAANNNNTTC	1 cut(s)	1557
PfeI	GAWTC	2 cut(s)	1789, 1884
PflMI	CCANNNNNTGG	1 cut(s)	1365
PkrI	GCNGC	7 cut(s)	369, 399, 465, 519, 1024, 1161, 1371
Ple19I	CGATCG	1 cut(s)	780
PleI	GAGTC	7 cut(s)	66, 127, 271, 395, 490, 1412, 1908
PmaCI	CACGTG	1 cut(s)	1125
PmlI	CACGTG	1 cut(s)	1125
PpsI	GAGTC	7 cut(s)	66, 127, 271, 395, 490, 1412, 1908
Ppu21I	YACGTR	2 cut(s)	307, 1125
PpuMI	RGGWCCY	1 cut(s)	1498
PsiI	TTATAA	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	429
Psp5II	RGGWCCY	1 cut(s)	1498
Psp6I	CCWGG	3 cut(s)	1087, 1256, 1494
PspCI	CACGTG	1 cut(s)	1125
PspEI	GGTNACC	1 cut(s)	1117
PspFI	CCCAGC	1 cut(s)	1385
PspGI	CCWGG	3 cut(s)	1087, 1256, 1494
PspN4I	GGNNCC	3 cut(s)	1255, 1263, 1384
PspPI	GGNCC	3 cut(s)	1382, 1498, 1577
PspPPI	RGGWCCY	1 cut(s)	1498
PsrI	GAACNNNNNNTAC	2 cut(s)	898, 930
PstI	CTGCAG	3 cut(s)	468, 522, 1938
PsuI	RGATCY	2 cut(s)	1847, 2009
PvuI	CGATCG	1 cut(s)	780
RruI	TCGCGA	1 cut(s)	1626
RseI	CAYNNNNRTG	5 cut(s)	651, 1044, 1638, 1782, 1811
SacI	GAGCTC	1 cut(s)	429
SalI	GTCGAC	2 cut(s)	375, 493
SaqAI	TTAA	4 cut(s)	854, 1130, 1323, 1362
SatI	GCNGC	7 cut(s)	368, 398, 464, 518, 1023, 1160, 1370
Sau3AI	GATC	9 cut(s)	50, 73, 777, 934, 1432, 1660, 1847, 1908, 2009
Sau96I	GGNCC	3 cut(s)	1382, 1498, 1577
ScaI	AGTACT	1 cut(s)	227
SchI	GAGTC	7 cut(s)	67, 127, 271, 396, 490, 1413, 1909
ScrFI	CCNGG	4 cut(s)	454, 1089, 1258, 1496
SduI	GDGCHC	5 cut(s)	179, 321, 429, 1826, 1922
SexAI	ACCWGGT	2 cut(s)	1087, 1494
SfaNI	GCATC	5 cut(s)	652, 777, 1101, 1524, 1717
SfcI	CTRYAG	5 cut(s)	464, 518, 744, 1597, 1934
SinI	GGWCC	2 cut(s)	1382, 1498
SmiMI	CAYNNNNRTG	5 cut(s)	651, 1044, 1638, 1782, 1811
SmlI	CTYRAG	3 cut(s)	299, 620, 2056
SmoI	CTYRAG	3 cut(s)	299, 620, 2056
SphI	GCATGC	2 cut(s)	675, 2105
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	7 cut(s)	66, 608, 891, 1730, 1853, 2099, 2109
SspMI	CTAG	5 cut(s)	1004, 1139, 1502, 1562, 2013
SstI	GAGCTC	1 cut(s)	429
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	4 cut(s)	452, 1087, 1256, 1494
StyI	CCWWGG	4 cut(s)	69, 886, 1378, 1390
TaaI	ACNGT	4 cut(s)	575, 1557, 1714, 1756
TaiI	ACGT	5 cut(s)	195, 309, 1127, 1305, 1815
TaqI	TCGA	6 cut(s)	49, 222, 376, 470, 482, 494
TatI	WGTACW	5 cut(s)	225, 360, 816, 843, 1971
TfiI	GAWTC	2 cut(s)	1789, 1884
Tru1I	TTAA	4 cut(s)	854, 1130, 1323, 1362
Tru9I	TTAA	4 cut(s)	854, 1130, 1323, 1362
TscAI	CASTG	7 cut(s)	60, 778, 1113, 1708, 1717, 1863, 2098
TseFI	GTSAC	3 cut(s)	569, 1117, 1471
TseI	GCWGC	7 cut(s)	367, 397, 463, 517, 1022, 1159, 1369
Tsp45I	GTSAC	3 cut(s)	569, 1117, 1471
TspDTI	ATGAA	4 cut(s)	1675, 1876, 2008, 2064
TspGWI	ACGGA	3 cut(s)	798, 1397, 2058
TspRI	CASTG	7 cut(s)	60, 778, 1113, 1708, 1717, 1863, 2098
Van91I	CCANNNNNTGG	1 cut(s)	1365
VpaK11BI	GGWCC	2 cut(s)	1382, 1498
XapI	RAATTY	6 cut(s)	848, 894, 1057, 1446, 1706, 2051
XceI	RCATGY	2 cut(s)	675, 2105
XmiI	GTMKAC	2 cut(s)	376, 494
XmnI	GAANNNNTTC	1 cut(s)	1557
XspI	CTAG	5 cut(s)	1004, 1139, 1502, 1562, 2013
ZrmI	AGTACT	1 cut(s)	227
Zsp2I	ATGCAT	1 cut(s)	770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.