Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0011809

Physical Location & Seq

Genomic Coordinates Forward (+)

71008077 .. 71013002

Gene Structure 4926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG410900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGGATCTGGAAACTGGGATTGATCGAAACCAAGTAAAGAAGGAATCATGGAGGACAATTCTGACTCTGGCTTATCAGAGCCTTGGAGTTGTTTATGGGGATTTGAGCATTTCACCTCTGTATGTGTACAAGAGCACATTTGCTGAAGATATAGAACACTCTGAGACCAATGAAGAAATCTTTGGAGTGTTGTCGTTTGTGTTCTGGACTCTCACACTTGTGCCTCTTCTCAAATATGTGTTTATTGTGCTCAGAGCTGATGATAATGGTGAAGGAGGGACATTTGCTTTGTATTCTTTGTTGTGTAGACATGCCAGAGTGAGCTCACTACCCAATTCCCAATCGGCTGATGAGGAGCTTACAGATTACAAGAAGGAAAGAGATACAAGGTCCTTGAAGCCCAACTCCGGTTTCGGGTCAGGCTTGAAGTCAACTTTGGAGAAGCATAGGGTGTTGCATAGGTGTTTGCTTGTACTTGCTTTGACTGGCACTTGTATGGTGATTGGTGATGGTGTTCTCACACCAGCTATTTCTGTGTTTTCTGCTGTTTCTGGGCTTGAGTTTTCTATGTCCGAAAAACATCACAAATATGTAGAACTTCCAATTGCCTGCATAGTTCTGATAGGCCTCTTTGCGCTTCAACATTATGGCACTCATAGAGTTGGGTTCTTGTTTGCTCCTATAGTTCTGGCATGGCTTCTGTGCATCAGTGTGATTGGTCTTTACAATATACTTCACTTCAATCCGACTGTGTACAAGGCACTTTCTCCATATTATATGTACAAATTTCTGAAGAAAACACAGAAAGGAGGTTGGATGTCCCTGGGTGGGATTTTGTTGTGTATAACAGGTTCAGAAGCCATGTTTGCTGATCTTGGACACTTTTCACAACTGTCAATCCAGATTGCTTTCACCTCTTTGGTTTATCCAGCTTTGGTTCTAGCATACATGGGACAAGCTGCTTACATATCTACACACTACACTAAGGGAGGAAACTCCGACATTGGATTTTACATATCTGTACCAGAGAAAGTGAGATGGCCTGTTCTGGTTATAGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCCATTATAACTGGGACTTTCTCAATCATCAAGCAATGTTCGGCCCTGGATTGCTTCCCAAGAGTCAAAATAGTCCATACATCATCCAAAATCCACGGCCAAATATATATCCCAGAAATCAATTGGATCTTGATGTTGTTATGCCTGGCTGTTACTATCGGTTTCAGAGACACAAAGCGCATGGGTAATGCATCAGGTTTTGCAGTCATCTCTGTGATGCTGGTCACAACCTGCTTAATGTCCCTCGTTATTGTCCTGTGCTGGCACCGGAGCATCTTCCTTGCAATTTGCTTTGTGTTCTTTTTCGGCACAATAGAAGCTCTTTACTTCTCAGCTTCTCTTGTCAAGTTCCACCAAGGAGCATGGGTTCCTGTTGCTCTTGCTCTGTGTTTTTTCTTTGTCATGTATGTTTGGCACTATGGCACAGTTAGAAAGTATGAGTTTGAAGTTCAGAACAAGGTCTCCATTAACTGGCTTCTCAGCCTTGGTCCCAGCCTTGGGATTGTCCGAGTTCGTGGGATTGGCCTCTTACACACCGAACTTGTATCCGGAATTCCAGCAATCTTCTCCCACTTTGTTACCAACCTTCCGGCTTTTCACCAAGTTCTAGTTTTCCTCTGCATCAAGTCTGTCCCAGTCCCACATGTTAGACCTGAGGAACGGTTTCTAGTGGGGCAAATTGGTCCAAGAGAGTATCGACTATACAGGTGTATTGTACGATATGGATATCGTGATGTACACAAAGATGATATGGAATTTGAGAATGATCTCGTCTGTAGTATAGCAGAGTTCCTACGGTCAGGAAGCAGTCCTGATTGCAATATTTTGAGTGAAGATTCTGGGAAAGAAGATGACAAAATGACGGTTGTTGGAACACGTTCTACTCATGCAGACGGGATTCAGCTGAGTGAGGACAGTGTAGAAATGACTGCAGAAATTACTACACTGGGGCAAAAAGAAATAAGATCACCGTCACCACCGGTGAGACAGAGAGAAATAAGGTCACCGCCAATGCCCCAACGGAGGAAGAAGGTAAGGTTCATCGTTCCGGAGAGCCCAAAGATCCAGACAGGTGCAAGGGAGGAACTGCAAGAGCTAATGGAAGCTAGGGAAGCTGGAATAGCTTACATAGTAGGGAACACGTACATGAATGCAAAGCAAGGATCAAGTTGGATGAAGAGGTTTGCCATTAACTACGGATATGAGTTTTTGAGGAGGAATAGCAGAACAGCTAGCTATGCACTAAATATTCCTCACGCGTCTACATTGGAGGTGGGGATGATCTACCATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

793

Amino Acids

88.89

Weight (kDa)

8.57

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	23 - 522	2e-168	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	535 - 792	8.1e-27	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70300
fragaria_vesca	FvH4_4g34790 FvH4_4g34790
malus_domestica	MD13G1089700.v1.1 MD16G1089900.v1.1 MD16G1090000.v1.1
prunus_persica	Prupe.1G256100_v2.0.a1
pyrus_communis	pycom13g07820 pycom16g07700
rosa_chinensis	RchiOBHm_Chr4g0444131
rosa_laevigata	RLG00000005853
rosa_multiflora	Rmu_sc0012638.1_g000009
rosa_roxburghii	Rroxscaffold_5G00384720
rosa_rugosa	Rorug04G0350300
rosa_samantha	Rh4AG410900 Rh4BG422300 Rh4CG436700 Rh4DG417600
rosa_wichuraiana	Rw4G035300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1094
Acc36I	ACCTGC	1 cut(s)	1325
AccB1I	GGYRCC	1 cut(s)	1350
AccB7I	CCANNNNNTGG	1 cut(s)	1557
AccI	GTMKAC	2 cut(s)	307, 2348
AccII	CGCG	1 cut(s)	2345
AccIII	TCCGGA	2 cut(s)	1634, 2134
AciI	CCGC	1 cut(s)	2093
AclWI	GGATC	4 cut(s)	12, 1220, 2143, 2257
AcoI	YGGCCR	1 cut(s)	1183
AcsI	RAATTY	3 cut(s)	785, 1638, 1841
AcuI	CTGAAG	2 cut(s)	165, 812
AfaI	GTAC	8 cut(s)	128, 474, 755, 782, 1023, 1803, 1824, 2231
AfiI	CCNNNNNNNGG	7 cut(s)	407, 414, 828, 1557, 1583, 1584, 2109
AflIII	ACRYGT	4 cut(s)	1729, 1961, 2226, 2343
AgeI	ACCGGT	1 cut(s)	2065
AgsI	TTSAA	5 cut(s)	397, 427, 641, 742, 1532
AjnI	CCWGG	4 cut(s)	822, 1083, 1131, 1230
AjuI	GAANNNNNNNTTGG	6 cut(s)	165, 197, 395, 419, 427, 451
AleI	CACNNNNGTG	1 cut(s)	218
AloI	GAACNNNNNNTCC	4 cut(s)	1437, 1469, 1532, 1564
Alw21I	GWGCWC	3 cut(s)	137, 252, 326
Alw26I	GTCTC	4 cut(s)	158, 1248, 1552, 2065
AlwI	GGATC	4 cut(s)	12, 1220, 2143, 2257
Aor13HI	TCCGGA	2 cut(s)	1634, 2134
AoxI	GGCC	6 cut(s)	625, 1040, 1086, 1128, 1183, 1609
ApeKI	GCWGC	2 cut(s)	959, 1067
ApoI	RAATTY	3 cut(s)	785, 1638, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	271, 303
AsiGI	ACCGGT	1 cut(s)	2065
Asp700I	GAANNNNTTC	2 cut(s)	1749, 1963
AspLEI	GCGC	2 cut(s)	637, 1266
AspS9I	GGNCC	4 cut(s)	390, 1129, 1574, 1769
AsuNHI	GCTAGC	1 cut(s)	2318
AvaII	GGWCC	3 cut(s)	390, 1574, 1769
AxyI	CCTNAGG	1 cut(s)	1740
BanI	GGYRCC	1 cut(s)	1350
BanII	GRGCYC	2 cut(s)	326, 2144
Bbv12I	GWGCWC	3 cut(s)	137, 252, 326
BbvI	GCAGC	2 cut(s)	946, 1054
BccI	CCATC	2 cut(s)	503, 1032
BceAI	ACGGC	1 cut(s)	1198
BciT130I	CCWGG	4 cut(s)	824, 1085, 1133, 1232
BciVI	GTATCC	1 cut(s)	1642
BcoDI	GTCTC	4 cut(s)	158, 1248, 1552, 2065
BfaI	CTAG	5 cut(s)	941, 1694, 1754, 2193, 2319
BfmI	CTRYAG	4 cut(s)	681, 1068, 1861, 2016
BfuAI	ACCTGC	1 cut(s)	1325
BfuI	GTATCC	1 cut(s)	1642
BisI	GCNGC	2 cut(s)	960, 1068
BlsI	GCNGC	2 cut(s)	961, 1069
Bme1390I	CCNGG	4 cut(s)	824, 1085, 1133, 1232
Bme18I	GGWCC	3 cut(s)	390, 1574, 1769
BmgT120I	GGNCC	4 cut(s)	390, 1129, 1574, 1769
BmiI	GGNNCC	3 cut(s)	1352, 1455, 1576
BmrFI	CCNGG	4 cut(s)	824, 1085, 1133, 1232
BmrI	ACTGGG	4 cut(s)	24, 1107, 1715, 2042
BmsI	GCATC	5 cut(s)	714, 1286, 1293, 1368, 1716
BmtI	GCTAGC	1 cut(s)	2322
BmuI	ACTGGG	4 cut(s)	24, 1107, 1715, 2042
BpuEI	CTTGAG	1 cut(s)	578
BsaAI	YACGTR	1 cut(s)	2229
BsaI	GGTCTC	2 cut(s)	158, 1552
BsaJI	CCNNGG	8 cut(s)	82, 822, 823, 1131, 1180, 1441, 1570, 1582
BsaWI	WCCGGW	5 cut(s)	407, 1353, 1634, 2065, 2134
BsaXI	ACNNNNNCTCC	4 cut(s)	1437, 1467, 1532, 1562
Bsc4I	CCNNNNNNNGG	7 cut(s)	407, 414, 828, 1557, 1583, 1584, 2109
Bse118I	RCCGGY	1 cut(s)	2065
Bse1I	ACTGG	6 cut(s)	19, 490, 1102, 1562, 1721, 2037
Bse21I	CCTNAGG	1 cut(s)	1740
Bse3DI	GCAATG	1 cut(s)	1127
BseAI	TCCGGA	2 cut(s)	1634, 2134
BseBI	CCWGG	4 cut(s)	824, 1085, 1133, 1232
BseDI	CCNNGG	8 cut(s)	82, 822, 823, 1131, 1180, 1441, 1570, 1582
BseGI	GGATG	4 cut(s)	822, 1169, 2265, 2370
BseLI	CCNNNNNNNGG	7 cut(s)	407, 414, 828, 1557, 1583, 1584, 2109
BseMI	GCAATG	1 cut(s)	1127
BseMII	CTCAG	6 cut(s)	153, 265, 1431, 1579, 1731, 1982
BseNI	ACTGG	6 cut(s)	19, 490, 1102, 1562, 1721, 2037
BseRI	GAGGAG	2 cut(s)	368, 2314
BseXI	GCAGC	2 cut(s)	946, 1054
BseYI	CCCAGC	1 cut(s)	1577
Bsh1236I	CGCG	1 cut(s)	2345
BshFI	GGCC	6 cut(s)	627, 1042, 1088, 1130, 1185, 1611
BshNI	GGYRCC	1 cut(s)	1350
BshTI	ACCGGT	1 cut(s)	2065
BsiHKAI	GWGCWC	3 cut(s)	137, 252, 326
BsiSI	CCGG	6 cut(s)	408, 1354, 1635, 1676, 2066, 2135
BslFI	GGGAC	8 cut(s)	292, 805, 966, 1114, 1312, 1560, 1703, 1709
BslI	CCNNNNNNNGG	7 cut(s)	407, 414, 828, 1557, 1583, 1584, 2109
BsmAI	GTCTC	4 cut(s)	158, 1248, 1552, 2065
BsmFI	GGGAC	8 cut(s)	292, 805, 966, 1114, 1312, 1560, 1703, 1709
BsmI	GAATGC	1 cut(s)	2242
BsnI	GGCC	6 cut(s)	627, 1042, 1088, 1130, 1185, 1611
Bso31I	GGTCTC	2 cut(s)	158, 1552
Bsp1286I	GDGCHC	4 cut(s)	137, 252, 326, 2144
Bsp13I	TCCGGA	2 cut(s)	1634, 2134
Bsp1407I	TGTACA	4 cut(s)	126, 753, 780, 1822
Bsp143I	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
BspACI	CCGC	1 cut(s)	2093
BspANI	GGCC	6 cut(s)	627, 1042, 1088, 1130, 1185, 1611
BspCNI	CTCAG	6 cut(s)	154, 264, 1430, 1578, 1732, 1983
BspEI	TCCGGA	2 cut(s)	1634, 2134
BspFNI	CGCG	1 cut(s)	2345
BspLI	GGNNCC	3 cut(s)	1352, 1455, 1576
BspMAI	CTGCAG	2 cut(s)	1072, 2020
BspMI	ACCTGC	1 cut(s)	1325
BspOI	GCTAGC	1 cut(s)	2322
BspPI	GGATC	4 cut(s)	12, 1220, 2143, 2257
BspT107I	GGYRCC	1 cut(s)	1350
BspTNI	GGTCTC	2 cut(s)	158, 1552
BsrDI	GCAATG	1 cut(s)	1127
BsrFI	RCCGGY	1 cut(s)	2065
BsrGI	TGTACA	4 cut(s)	126, 753, 780, 1822
BsrI	ACTGG	6 cut(s)	19, 490, 1102, 1562, 1721, 2037
BssAI	RCCGGY	1 cut(s)	2065
BssECI	CCNNGG	8 cut(s)	82, 822, 823, 1131, 1180, 1441, 1570, 1582
BssMI	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
BssT1I	CCWWGG	4 cut(s)	82, 1441, 1570, 1582
Bst2UI	CCWGG	4 cut(s)	824, 1085, 1133, 1232
Bst4CI	ACNGT	8 cut(s)	751, 894, 1513, 1749, 1884, 1951, 2003, 2058
Bst6I	CTCTTC	2 cut(s)	231, 2258
BstAUI	TGTACA	4 cut(s)	126, 753, 780, 1822
BstBAI	YACGTR	1 cut(s)	2229
BstC8I	GCNNGC	4 cut(s)	610, 1065, 1349, 2320
BstDEI	CTNAG	7 cut(s)	162, 251, 984, 1417, 1565, 1740, 1991
BstDSI	CCRYGG	1 cut(s)	1180
BstEII	GGTNACC	1 cut(s)	2088
BstF5I	GGATG	4 cut(s)	822, 1169, 2265, 2370
BstFNI	CGCG	1 cut(s)	2345
BstHHI	GCGC	2 cut(s)	637, 1266
BstKTI	GATC	9 cut(s)	7, 25, 874, 1215, 1855, 2054, 2151, 2252, 2370
BstMAI	GTCTC	4 cut(s)	158, 1248, 1552, 2065
BstMBI	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
BstMWI	GCNNNNNNNGC	5 cut(s)	866, 1064, 2198, 2207, 2324
BstNI	CCWGG	4 cut(s)	824, 1085, 1133, 1232
BstNSI	RCATGY	2 cut(s)	314, 1733
BstPI	GGTNACC	1 cut(s)	2088
BstSCI	CCNGG	4 cut(s)	822, 1083, 1131, 1230
BstSFI	CTRYAG	4 cut(s)	681, 1068, 1861, 2016
BstUI	CGCG	1 cut(s)	2345
BstV1I	GCAGC	2 cut(s)	946, 1054
BstX2I	RGATCY	3 cut(s)	4, 1212, 2148
BstYI	RGATCY	3 cut(s)	4, 1212, 2148
Bsu36I	CCTNAGG	1 cut(s)	1740
BsuI	GTATCC	1 cut(s)	1642
BsuRI	GGCC	6 cut(s)	627, 1042, 1088, 1130, 1185, 1611
BtgI	CCRYGG	1 cut(s)	1180
BtsCI	GGATG	4 cut(s)	822, 1169, 2265, 2370
BtsIMutI	CAGTG	3 cut(s)	715, 2008, 2030
BveI	ACCTGC	1 cut(s)	1325
Cac8I	GCNNGC	4 cut(s)	610, 1065, 1349, 2320
CfoI	GCGC	2 cut(s)	637, 1266
Cfr10I	RCCGGY	1 cut(s)	2065
Cfr13I	GGNCC	4 cut(s)	390, 1129, 1574, 1769
CseI	GACGC	1 cut(s)	2334
Csp6I	GTAC	8 cut(s)	127, 473, 754, 781, 1022, 1802, 1823, 2230
CspAI	ACCGGT	1 cut(s)	2065
CviQI	GTAC	8 cut(s)	127, 473, 754, 781, 1022, 1802, 1823, 2230
DdeI	CTNAG	7 cut(s)	162, 251, 984, 1417, 1565, 1740, 1991
DpnI	GATC	9 cut(s)	6, 24, 873, 1214, 1854, 2053, 2150, 2251, 2369
DpnII	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
EaeI	YGGCCR	1 cut(s)	1183
Eam1104I	CTCTTC	2 cut(s)	231, 2258
EarI	CTCTTC	2 cut(s)	231, 2258
Ecl136II	GAGCTC	1 cut(s)	324
Eco130I	CCWWGG	4 cut(s)	82, 1441, 1570, 1582
Eco147I	AGGCCT	1 cut(s)	627
Eco24I	GRGCYC	2 cut(s)	326, 2144
Eco31I	GGTCTC	2 cut(s)	158, 1552
Eco32I	GATATC	1 cut(s)	1814
Eco47I	GGWCC	3 cut(s)	390, 1574, 1769
Eco53kI	GAGCTC	1 cut(s)	324
Eco57I	CTGAAG	2 cut(s)	165, 812
Eco81I	CCTNAGG	1 cut(s)	1740
Eco91I	GGTNACC	1 cut(s)	2088
EcoICRI	GAGCTC	1 cut(s)	324
EcoO109I	RGGNCCY	1 cut(s)	390
EcoO65I	GGTNACC	1 cut(s)	2088
EcoRI	GAATTC	1 cut(s)	1638
EcoRII	CCWGG	4 cut(s)	822, 1083, 1131, 1230
EcoRV	GATATC	1 cut(s)	1814
EcoT14I	CCWWGG	4 cut(s)	82, 1441, 1570, 1582
EcoT22I	ATGCAT	1 cut(s)	1279
EcoT38I	GRGCYC	2 cut(s)	326, 2144
ErhI	CCWWGG	4 cut(s)	82, 1441, 1570, 1582
FaqI	GGGAC	8 cut(s)	292, 805, 966, 1114, 1312, 1560, 1703, 1709
FblI	GTMKAC	2 cut(s)	307, 2348
Fnu4HI	GCNGC	2 cut(s)	960, 1068
FokI	GGATG	4 cut(s)	829, 1156, 2272, 2377
FriOI	GRGCYC	2 cut(s)	326, 2144
Fsp4HI	GCNGC	2 cut(s)	960, 1068
FspBI	CTAG	5 cut(s)	941, 1694, 1754, 2193, 2319
GlaI	GCGC	2 cut(s)	636, 1265
GluI	GCNGC	2 cut(s)	960, 1068
GsaI	CCCAGC	1 cut(s)	1581
HaeIII	GGCC	6 cut(s)	627, 1042, 1088, 1130, 1185, 1611
HapII	CCGG	6 cut(s)	408, 1354, 1635, 1676, 2066, 2135
HgaI	GACGC	1 cut(s)	2334
HhaI	GCGC	2 cut(s)	637, 1266
Hin6I	GCGC	2 cut(s)	635, 1264
HinP1I	GCGC	2 cut(s)	635, 1264
HincII	GTYRAC	1 cut(s)	432
HindII	GTYRAC	1 cut(s)	432
HinfI	GANTC	6 cut(s)	44, 64, 208, 1149, 1922, 1984
HpaII	CCGG	6 cut(s)	408, 1354, 1635, 1676, 2066, 2135
Hpy166II	GTNNAC	6 cut(s)	127, 308, 432, 754, 1825, 2349
Hpy8I	GTNNAC	6 cut(s)	127, 308, 432, 754, 1825, 2349
HpyAV	CCTTC	5 cut(s)	34, 266, 367, 1682, 2110
HpyCH4III	ACNGT	8 cut(s)	751, 894, 1513, 1749, 1884, 1951, 2003, 2058
HpyCH4IV	ACGT	2 cut(s)	1963, 2228
HpyF10VI	GCNNNNNNNGC	5 cut(s)	866, 1064, 2198, 2207, 2324
HpyF3I	CTNAG	7 cut(s)	162, 251, 984, 1417, 1565, 1740, 1991
HpySE526I	ACGT	2 cut(s)	1963, 2228
HspAI	GCGC	2 cut(s)	635, 1264
Kpn2I	TCCGGA	2 cut(s)	1634, 2134
Kzo9I	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
LmnI	GCTCC	4 cut(s)	355, 682, 1356, 1445
Lsp1109I	GCAGC	2 cut(s)	946, 1054
LweI	GCATC	5 cut(s)	714, 1286, 1293, 1368, 1716
MaeI	CTAG	5 cut(s)	941, 1694, 1754, 2193, 2319
MaeII	ACGT	2 cut(s)	1963, 2228
MaeIII	GTNAC	5 cut(s)	1237, 1309, 1663, 2058, 2088
MalI	GATC	9 cut(s)	6, 24, 873, 1214, 1854, 2053, 2150, 2251, 2369
MboI	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
MfeI	CAATTG	2 cut(s)	603, 1207
MflI	RGATCY	3 cut(s)	4, 1212, 2148
MhlI	GDGCHC	4 cut(s)	137, 252, 326, 2144
MluI	ACGCGT	1 cut(s)	2343
MlyI	GAGTC	3 cut(s)	58, 202, 1158
MmeI	TCCRAC	5 cut(s)	770, 794, 1023, 1936, 2237
Mph1103I	ATGCAT	1 cut(s)	1279
MroI	TCCGGA	2 cut(s)	1634, 2134
MroXI	GAANNNNTTC	2 cut(s)	1749, 1963
MseI	TTAA	3 cut(s)	1322, 1554, 2277
MslI	CAYNNNNRTG	7 cut(s)	218, 494, 588, 710, 1298, 1830, 2231
MspA1I	CMGCKG	1 cut(s)	1990
MspI	CCGG	6 cut(s)	408, 1354, 1635, 1676, 2066, 2135
MspR9I	CCNGG	4 cut(s)	824, 1085, 1133, 1232
MunI	CAATTG	2 cut(s)	603, 1207
Mva1269I	GAATGC	1 cut(s)	2242
MvaI	CCWGG	4 cut(s)	824, 1085, 1133, 1232
MvnI	CGCG	1 cut(s)	2345
MwoI	GCNNNNNNNGC	5 cut(s)	866, 1064, 2198, 2207, 2324
NdeII	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
NheI	GCTAGC	1 cut(s)	2318
NlaIV	GGNNCC	3 cut(s)	1352, 1455, 1576
NmuCI	GTSAC	3 cut(s)	1309, 2058, 2088
NsiI	ATGCAT	1 cut(s)	1279
NspI	RCATGY	2 cut(s)	314, 1733
OliI	CACNNNNGTG	1 cut(s)	218
PasI	CCCWGGG	1 cut(s)	823
PceI	AGGCCT	1 cut(s)	627
PciI	ACATGT	1 cut(s)	1729
PctI	GAATGC	1 cut(s)	2242
PdmI	GAANNNNTTC	2 cut(s)	1749, 1963
PfeI	GAWTC	3 cut(s)	44, 1922, 1984
PflMI	CCANNNNNTGG	1 cut(s)	1557
PinAI	ACCGGT	1 cut(s)	2065
PkrI	GCNGC	2 cut(s)	961, 1069
PleI	GAGTC	3 cut(s)	58, 202, 1157
PpsI	GAGTC	3 cut(s)	58, 202, 1157
Ppu21I	YACGTR	1 cut(s)	2229
PpuMI	RGGWCCY	1 cut(s)	390
PscI	ACATGT	1 cut(s)	1729
PsiI	TTATAA	1 cut(s)	1094
Psp124BI	GAGCTC	1 cut(s)	326
Psp5II	RGGWCCY	1 cut(s)	390
Psp6I	CCWGG	4 cut(s)	822, 1083, 1131, 1230
PspEI	GGTNACC	1 cut(s)	2088
PspFI	CCCAGC	1 cut(s)	1577
PspGI	CCWGG	4 cut(s)	822, 1083, 1131, 1230
PspN4I	GGNNCC	3 cut(s)	1352, 1455, 1576
PspPI	GGNCC	4 cut(s)	390, 1129, 1574, 1769
PspPPI	RGGWCCY	1 cut(s)	390
PsrI	GAACNNNNNNTAC	4 cut(s)	835, 867, 1951, 1983
PstI	CTGCAG	2 cut(s)	1072, 2020
PsuI	RGATCY	3 cut(s)	4, 1212, 2148
PvuII	CAGCTG	1 cut(s)	1990
RsaI	GTAC	8 cut(s)	128, 474, 755, 782, 1023, 1803, 1824, 2231
RsaNI	GTAC	8 cut(s)	127, 473, 754, 781, 1022, 1802, 1823, 2230
RseI	CAYNNNNRTG	7 cut(s)	218, 494, 588, 710, 1298, 1830, 2231
SacI	GAGCTC	1 cut(s)	326
SaqAI	TTAA	3 cut(s)	1322, 1554, 2277
SatI	GCNGC	2 cut(s)	960, 1068
Sau3AI	GATC	9 cut(s)	4, 22, 871, 1212, 1852, 2051, 2148, 2249, 2367
Sau96I	GGNCC	4 cut(s)	390, 1129, 1574, 1769
SchI	GAGTC	3 cut(s)	58, 202, 1158
ScrFI	CCNGG	4 cut(s)	824, 1085, 1133, 1232
SduI	GDGCHC	4 cut(s)	137, 252, 326, 2144
SfaNI	GCATC	5 cut(s)	714, 1286, 1293, 1368, 1716
SfcI	CTRYAG	4 cut(s)	681, 1068, 1861, 2016
SgrAI	CRCCGGYG	1 cut(s)	2065
SinI	GGWCC	3 cut(s)	390, 1574, 1769
SmiMI	CAYNNNNRTG	7 cut(s)	218, 494, 588, 710, 1298, 1830, 2231
SmlI	CTYRAG	1 cut(s)	557
SmoI	CTYRAG	1 cut(s)	557
SseBI	AGGCCT	1 cut(s)	627
SsiI	CCGC	1 cut(s)	2093
SspI	AATATT	2 cut(s)	1909, 2335
SspMI	CTAG	5 cut(s)	941, 1694, 1754, 2193, 2319
SstI	GAGCTC	1 cut(s)	326
StuI	AGGCCT	1 cut(s)	627
StyD4I	CCNGG	4 cut(s)	822, 1083, 1131, 1230
StyI	CCWWGG	4 cut(s)	82, 1441, 1570, 1582
TaaI	ACNGT	8 cut(s)	751, 894, 1513, 1749, 1884, 1951, 2003, 2058
TaiI	ACGT	2 cut(s)	1966, 2231
TaqI	TCGA	2 cut(s)	25, 1783
TatI	WGTACW	5 cut(s)	126, 472, 753, 780, 1822
TfiI	GAWTC	3 cut(s)	44, 1922, 1984
Tru1I	TTAA	3 cut(s)	1322, 1554, 2277
Tru9I	TTAA	3 cut(s)	1322, 1554, 2277
TscAI	CASTG	3 cut(s)	715, 2008, 2037
TseFI	GTSAC	3 cut(s)	1309, 2058, 2088
TseI	GCWGC	2 cut(s)	959, 1067
Tsp45I	GTSAC	3 cut(s)	1309, 2058, 2088
TspDTI	ATGAA	4 cut(s)	186, 2116, 2249, 2276
TspGWI	ACGGA	2 cut(s)	2122, 2298
TspRI	CASTG	3 cut(s)	715, 2008, 2037
Van91I	CCANNNNNTGG	1 cut(s)	1557
VpaK11BI	GGWCC	3 cut(s)	390, 1574, 1769
XapI	RAATTY	3 cut(s)	785, 1638, 1841
XceI	RCATGY	2 cut(s)	314, 1733
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1206
XmiI	GTMKAC	2 cut(s)	307, 2348
XmnI	GAANNNNTTC	2 cut(s)	1749, 1963
XspI	CTAG	5 cut(s)	941, 1694, 1754, 2193, 2319
Zsp2I	ATGCAT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.