pycom14g15140

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
17847132 .. 17847462
331 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g15140.2

Sequence Viewer

Length: 234 bp
ATGGACAATTATATGTGGCTTTATCTAGAGGGTCTTAAAATCAACCACAACCGTGTTAGTAAAAAATGGCTCCATAGTAGGCCAAGAAGGTGTATTTACACGGAATGTGGTATACAAAGAAGTCTTGCTTCATTCCAACTAATTATGGTGATTTCTAATAGATTGGCAATGAAAATTTGGAGCCTCAATCATGAACAAATGGATGGAAATTGCAGCATTGATGTCAATATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

78

Amino Acids

9.2

Weight (kDa)

9.26

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024340)

Species Orthologous Gene IDs
malus_domestica MD03G1133800.v1.1
pyrus_communis pycom01g00580 pycom14g15140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 112
AcsI RAATTY 1 cut(s) 174
AleI CACNNNNGTG 1 cut(s) 51
AoxI GGCC 1 cut(s) 80
ApeKI GCWGC 1 cut(s) 213
ApoI RAATTY 1 cut(s) 174
AsuHPI GGTGA 1 cut(s) 160
BbvI GCAGC 1 cut(s) 225
BccI CCATC 1 cut(s) 197
BfaI CTAG 1 cut(s) 26
BisI GCNGC 1 cut(s) 214
BlsI GCNGC 1 cut(s) 215
BmiI GGNNCC 2 cut(s) 71, 182
Bse3DI GCAATG 1 cut(s) 174
BseGI GGATG 1 cut(s) 208
BseMI GCAATG 1 cut(s) 174
BseXI GCAGC 1 cut(s) 225
BshFI GGCC 1 cut(s) 82
BsnI GGCC 1 cut(s) 82
BspANI GGCC 1 cut(s) 82
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 2 cut(s) 71, 182
BsrDI GCAATG 1 cut(s) 174
BssNAI GTATAC 1 cut(s) 113
Bst1107I GTATAC 1 cut(s) 113
Bst4CI ACNGT 1 cut(s) 53
BstF5I GGATG 1 cut(s) 208
BstV1I GCAGC 1 cut(s) 225
BstZ17I GTATAC 1 cut(s) 113
BsuRI GGCC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 208
CciI TCATGA 1 cut(s) 190
CviAII CATG 1 cut(s) 191
CviJI RGCY 4 cut(s) 19, 70, 82, 183
CviKI_1 RGCY 4 cut(s) 19, 70, 82, 183
FaeI CATG 1 cut(s) 194
FaiI YATR 7 cut(s) 12, 14, 75, 113, 146, 192, 230
FalI AAGNNNNNCTT 2 cut(s) 112, 144
FatI CATG 1 cut(s) 190
FblI GTMKAC 1 cut(s) 112
Fnu4HI GCNGC 1 cut(s) 214
FokI GGATG 1 cut(s) 215
Fsp4HI GCNGC 1 cut(s) 214
FspBI CTAG 1 cut(s) 26
GluI GCNGC 1 cut(s) 214
HaeIII GGCC 1 cut(s) 82
Hin1II CATG 1 cut(s) 194
HphI GGTGA 1 cut(s) 160
Hpy166II GTNNAC 1 cut(s) 113
Hpy188III TCNNGA 2 cut(s) 26, 191
Hpy8I GTNNAC 1 cut(s) 113
HpyAV CCTTC 1 cut(s) 81
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 1 cut(s) 213
Hsp92II CATG 1 cut(s) 194
LmnI GCTCC 2 cut(s) 75, 180
Lsp1109I GCAGC 1 cut(s) 225
MaeI CTAG 1 cut(s) 26
MluCI AATT 4 cut(s) 7, 141, 174, 208
MmeI TCCRAC 1 cut(s) 160
MnlI CCTC 2 cut(s) 22, 194
MseI TTAA 1 cut(s) 36
MslI CAYNNNNRTG 1 cut(s) 51
NlaIII CATG 1 cut(s) 194
NlaIV GGNNCC 2 cut(s) 71, 182
OliI CACNNNNGTG 1 cut(s) 51
PagI TCATGA 1 cut(s) 190
PkrI GCNGC 1 cut(s) 215
PspN4I GGNNCC 2 cut(s) 71, 182
RseI CAYNNNNRTG 1 cut(s) 51
SaqAI TTAA 1 cut(s) 36
SatI GCNGC 1 cut(s) 214
SetI ASST 1 cut(s) 92
SgeI CNNG 6 cut(s) 38, 65, 96, 112, 137, 203
SmiMI CAYNNNNRTG 1 cut(s) 51
Sse9I AATT 4 cut(s) 7, 141, 174, 208
SspMI CTAG 1 cut(s) 26
TaaI ACNGT 1 cut(s) 53
TasI AATT 4 cut(s) 7, 141, 174, 208
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
TseI GCWGC 1 cut(s) 213
TspDTI ATGAA 3 cut(s) 120, 185, 207
TspGWI ACGGA 1 cut(s) 116
XapI RAATTY 1 cut(s) 174
XbaI TCTAGA 1 cut(s) 25
XmiI GTMKAC 1 cut(s) 112
XspI CTAG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.