Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1196900.v1.1 |
| prunus_persica | Prupe.5G189100_v2.0.a1 |
| pyrus_communis | pycom14g16360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1121 |
| AccBSI | CCGCTC | 1 cut(s) | 297 |
| AccII | CGCG | 2 cut(s) | 1103, 1414 |
| AclWI | GGATC | 2 cut(s) | 1760, 1773 |
| AcoI | YGGCCR | 1 cut(s) | 711 |
| AcsI | RAATTY | 3 cut(s) | 643, 1221, 1684 |
| AcuI | CTGAAG | 2 cut(s) | 428, 1010 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfeI | AGCGCT | 1 cut(s) | 387 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 336, 685, 1197 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 830 |
| AjnI | CCWGG | 2 cut(s) | 335, 1768 |
| AluBI | AGCT | 6 cut(s) | 586, 753, 829, 1092, 1214, 1502 |
| AluI | AGCT | 6 cut(s) | 586, 753, 829, 1092, 1214, 1502 |
| Alw21I | GWGCWC | 2 cut(s) | 907, 1470 |
| Alw26I | GTCTC | 4 cut(s) | 96, 326, 721, 1659 |
| AlwI | GGATC | 2 cut(s) | 1760, 1773 |
| Ama87I | CYCGRG | 1 cut(s) | 1580 |
| Aor51HI | AGCGCT | 1 cut(s) | 387 |
| AoxI | GGCC | 5 cut(s) | 211, 459, 711, 1594, 1649 |
| ApeKI | GCWGC | 4 cut(s) | 598, 656, 1386, 1576 |
| ApoI | RAATTY | 3 cut(s) | 643, 1221, 1684 |
| AspLEI | GCGC | 2 cut(s) | 388, 1414 |
| AspS9I | GGNCC | 1 cut(s) | 1649 |
| AsuHPI | GGTGA | 3 cut(s) | 593, 728, 1522 |
| AsuII | TTCGAA | 1 cut(s) | 1087 |
| AvaI | CYCGRG | 1 cut(s) | 1580 |
| BamHI | GGATCC | 1 cut(s) | 1765 |
| Bbv12I | GWGCWC | 2 cut(s) | 907, 1470 |
| BbvI | GCAGC | 4 cut(s) | 610, 643, 1398, 1563 |
| BccI | CCATC | 9 cut(s) | 183, 189, 353, 1012, 1223, 1274, 1289, 1456, 1598 |
| BceAI | ACGGC | 1 cut(s) | 1528 |
| BciT130I | CCWGG | 2 cut(s) | 337, 1770 |
| BclI | TGATCA | 1 cut(s) | 960 |
| BcoDI | GTCTC | 4 cut(s) | 96, 326, 721, 1659 |
| BfaI | CTAG | 1 cut(s) | 1280 |
| BfmI | CTRYAG | 1 cut(s) | 1384 |
| BfoI | RGCGCY | 1 cut(s) | 389 |
| BisI | GCNGC | 7 cut(s) | 291, 466, 599, 657, 1387, 1577, 1695 |
| BlsI | GCNGC | 7 cut(s) | 292, 467, 600, 658, 1388, 1578, 1696 |
| Bme1390I | CCNGG | 2 cut(s) | 337, 1770 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 830 |
| BmeT110I | CYCGRG | 1 cut(s) | 1580 |
| BmgT120I | GGNCC | 1 cut(s) | 1649 |
| BmiI | GGNNCC | 2 cut(s) | 54, 1767 |
| BmrFI | CCNGG | 2 cut(s) | 337, 1770 |
| BmrI | ACTGGG | 1 cut(s) | 530 |
| BmsI | GCATC | 8 cut(s) | 207, 260, 462, 875, 915, 1275, 1317, 1342 |
| BmuI | ACTGGG | 1 cut(s) | 530 |
| BpmI | CTGGAG | 1 cut(s) | 443 |
| Bpu14I | TTCGAA | 1 cut(s) | 1087 |
| Bsa29I | ATCGAT | 1 cut(s) | 923 |
| BsaAI | YACGTR | 1 cut(s) | 1640 |
| BsaBI | GATNNNNATC | 1 cut(s) | 981 |
| BsaI | GGTCTC | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 5 cut(s) | 708, 1457, 1597, 1698, 1769 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 336, 685, 1197 |
| Bse118I | RCCGGY | 1 cut(s) | 713 |
| Bse1I | ACTGG | 2 cut(s) | 525, 1633 |
| Bse3DI | GCAATG | 2 cut(s) | 1155, 1167 |
| Bse8I | GATNNNNATC | 1 cut(s) | 981 |
| BseBI | CCWGG | 2 cut(s) | 337, 1770 |
| BseCI | ATCGAT | 1 cut(s) | 923 |
| BseDI | CCNNGG | 5 cut(s) | 708, 1457, 1597, 1698, 1769 |
| BseGI | GGATG | 2 cut(s) | 1467, 1708 |
| BseJI | GATNNNNATC | 1 cut(s) | 981 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 336, 685, 1197 |
| BseMI | GCAATG | 2 cut(s) | 1155, 1167 |
| BseMII | CTCAG | 6 cut(s) | 300, 525, 635, 680, 1017, 1337 |
| BseNI | ACTGG | 2 cut(s) | 525, 1633 |
| BseXI | GCAGC | 4 cut(s) | 610, 643, 1398, 1563 |
| Bsh1236I | CGCG | 2 cut(s) | 1103, 1414 |
| Bsh1285I | CGRYCG | 1 cut(s) | 303 |
| BshFI | GGCC | 5 cut(s) | 213, 461, 713, 1596, 1651 |
| BshVI | ATCGAT | 1 cut(s) | 923 |
| BsiEI | CGRYCG | 1 cut(s) | 303 |
| BsiHKAI | GWGCWC | 2 cut(s) | 907, 1470 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1580 |
| BsiSI | CCGG | 1 cut(s) | 714 |
| BslFI | GGGAC | 1 cut(s) | 1724 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 336, 685, 1197 |
| BsmAI | GTCTC | 4 cut(s) | 96, 326, 721, 1659 |
| BsmFI | GGGAC | 1 cut(s) | 1724 |
| BsmI | GAATGC | 3 cut(s) | 74, 998, 1578 |
| BsnI | GGCC | 5 cut(s) | 213, 461, 713, 1596, 1651 |
| Bso31I | GGTCTC | 1 cut(s) | 326 |
| BsoBI | CYCGRG | 1 cut(s) | 1580 |
| Bsp119I | TTCGAA | 1 cut(s) | 1087 |
| Bsp1286I | GDGCHC | 2 cut(s) | 907, 1470 |
| Bsp143I | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| Bsp19I | CCATGG | 2 cut(s) | 708, 1698 |
| BspANI | GGCC | 5 cut(s) | 213, 461, 713, 1596, 1651 |
| BspCNI | CTCAG | 6 cut(s) | 299, 526, 634, 679, 1018, 1336 |
| BspDI | ATCGAT | 1 cut(s) | 923 |
| BspFNI | CGCG | 2 cut(s) | 1103, 1414 |
| BspHI | TCATGA | 1 cut(s) | 841 |
| BspLI | GGNNCC | 2 cut(s) | 54, 1767 |
| BspMAI | CTGCAG | 1 cut(s) | 1388 |
| BspPI | GGATC | 2 cut(s) | 1760, 1773 |
| BspT104I | TTCGAA | 1 cut(s) | 1087 |
| BspTNI | GGTCTC | 1 cut(s) | 326 |
| BsrBI | CCGCTC | 1 cut(s) | 297 |
| BsrDI | GCAATG | 2 cut(s) | 1155, 1167 |
| BsrFI | RCCGGY | 1 cut(s) | 713 |
| BsrI | ACTGG | 2 cut(s) | 525, 1633 |
| BssAI | RCCGGY | 1 cut(s) | 713 |
| BssECI | CCNNGG | 5 cut(s) | 708, 1457, 1597, 1698, 1769 |
| BssMI | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| BssT1I | CCWWGG | 3 cut(s) | 708, 1597, 1698 |
| Bst2UI | CCWGG | 2 cut(s) | 337, 1770 |
| Bst4CI | ACNGT | 4 cut(s) | 968, 1118, 1458, 1475 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 257 |
| BstBAI | YACGTR | 1 cut(s) | 1640 |
| BstBI | TTCGAA | 1 cut(s) | 1087 |
| BstDEI | CTNAG | 6 cut(s) | 286, 534, 621, 666, 1026, 1323 |
| BstDSI | CCRYGG | 3 cut(s) | 708, 1457, 1698 |
| BstF5I | GGATG | 2 cut(s) | 1467, 1708 |
| BstFNI | CGCG | 2 cut(s) | 1103, 1414 |
| BstH2I | RGCGCY | 1 cut(s) | 389 |
| BstHHI | GCGC | 2 cut(s) | 388, 1414 |
| BstKTI | GATC | 7 cut(s) | 303, 540, 963, 985, 1101, 1489, 1768 |
| BstMAI | GTCTC | 4 cut(s) | 96, 326, 721, 1659 |
| BstMBI | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| BstMCI | CGRYCG | 1 cut(s) | 303 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 219, 257, 458, 1576 |
| BstNI | CCWGG | 2 cut(s) | 337, 1770 |
| BstNSI | RCATGY | 3 cut(s) | 1186, 1190, 1590 |
| BstSCI | CCNGG | 2 cut(s) | 335, 1768 |
| BstSFI | CTRYAG | 1 cut(s) | 1384 |
| BstUI | CGCG | 2 cut(s) | 1103, 1414 |
| BstV1I | GCAGC | 4 cut(s) | 610, 643, 1398, 1563 |
| BstX2I | RGATCY | 1 cut(s) | 1765 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1604 |
| BstYI | RGATCY | 1 cut(s) | 1765 |
| Bsu15I | ATCGAT | 1 cut(s) | 923 |
| BsuRI | GGCC | 5 cut(s) | 213, 461, 713, 1596, 1651 |
| BsuTUI | ATCGAT | 1 cut(s) | 923 |
| BtgI | CCRYGG | 3 cut(s) | 708, 1457, 1698 |
| BtgZI | GCGATG | 2 cut(s) | 1298, 1308 |
| BtsCI | GGATG | 2 cut(s) | 1467, 1708 |
| CciI | TCATGA | 1 cut(s) | 841 |
| CfoI | GCGC | 2 cut(s) | 388, 1414 |
| Cfr10I | RCCGGY | 1 cut(s) | 713 |
| Cfr13I | GGNCC | 1 cut(s) | 1649 |
| ClaI | ATCGAT | 1 cut(s) | 923 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DdeI | CTNAG | 6 cut(s) | 286, 534, 621, 666, 1026, 1323 |
| DpnI | GATC | 7 cut(s) | 302, 539, 962, 984, 1100, 1488, 1767 |
| DpnII | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1121 |
| DriI | GACNNNNNGTC | 1 cut(s) | 830 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1121 |
| EaeI | YGGCCR | 1 cut(s) | 711 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 830 |
| Eco130I | CCWWGG | 3 cut(s) | 708, 1597, 1698 |
| Eco147I | AGGCCT | 2 cut(s) | 213, 461 |
| Eco31I | GGTCTC | 1 cut(s) | 326 |
| Eco47III | AGCGCT | 1 cut(s) | 387 |
| Eco57I | CTGAAG | 2 cut(s) | 428, 1010 |
| Eco88I | CYCGRG | 1 cut(s) | 1580 |
| EcoRI | GAATTC | 1 cut(s) | 643 |
| EcoRII | CCWGG | 2 cut(s) | 335, 1768 |
| EcoT14I | CCWWGG | 3 cut(s) | 708, 1597, 1698 |
| EcoT22I | ATGCAT | 1 cut(s) | 1188 |
| ErhI | CCWWGG | 3 cut(s) | 708, 1597, 1698 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 372, 404 |
| FaqI | GGGAC | 1 cut(s) | 1724 |
| FauI | CCCGC | 5 cut(s) | 283, 302, 358, 881, 1190 |
| FauNDI | CATATG | 1 cut(s) | 87 |
| FbaI | TGATCA | 1 cut(s) | 960 |
| Fnu4HI | GCNGC | 7 cut(s) | 291, 466, 599, 657, 1387, 1577, 1695 |
| FokI | GGATG | 2 cut(s) | 1474, 1715 |
| Fsp4HI | GCNGC | 7 cut(s) | 291, 466, 599, 657, 1387, 1577, 1695 |
| FspBI | CTAG | 1 cut(s) | 1280 |
| GlaI | GCGC | 2 cut(s) | 387, 1413 |
| GluI | GCNGC | 7 cut(s) | 291, 466, 599, 657, 1387, 1577, 1695 |
| GsuI | CTGGAG | 1 cut(s) | 443 |
| HaeII | RGCGCY | 1 cut(s) | 389 |
| HaeIII | GGCC | 5 cut(s) | 213, 461, 713, 1596, 1651 |
| HapII | CCGG | 1 cut(s) | 714 |
| HhaI | GCGC | 2 cut(s) | 388, 1414 |
| Hin6I | GCGC | 2 cut(s) | 386, 1412 |
| HinP1I | GCGC | 2 cut(s) | 386, 1412 |
| HindIII | AAGCTT | 2 cut(s) | 1090, 1212 |
| HinfI | GANTC | 4 cut(s) | 312, 326, 370, 1022 |
| HpaII | CCGG | 1 cut(s) | 714 |
| HphI | GGTGA | 3 cut(s) | 593, 728, 1522 |
| Hpy166II | GTNNAC | 4 cut(s) | 856, 1346, 1405, 1438 |
| Hpy188I | TCNGA | 9 cut(s) | 353, 410, 535, 624, 912, 990, 1027, 1326, 1536 |
| Hpy188III | TCNNGA | 9 cut(s) | 202, 323, 422, 485, 842, 882, 1096, 1126, 1207 |
| Hpy8I | GTNNAC | 4 cut(s) | 856, 1346, 1405, 1438 |
| Hpy99I | CGWCG | 2 cut(s) | 311, 912 |
| HpyCH4III | ACNGT | 4 cut(s) | 968, 1118, 1458, 1475 |
| HpyCH4IV | ACGT | 2 cut(s) | 1371, 1639 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 219, 257, 458, 1576 |
| HpyF3I | CTNAG | 6 cut(s) | 286, 534, 621, 666, 1026, 1323 |
| HpySE526I | ACGT | 2 cut(s) | 1371, 1639 |
| HspAI | GCGC | 2 cut(s) | 386, 1412 |
| Ksp22I | TGATCA | 1 cut(s) | 960 |
| Kzo9I | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| LmnI | GCTCC | 3 cut(s) | 1152, 1465, 1773 |
| Lsp1109I | GCAGC | 4 cut(s) | 610, 643, 1398, 1563 |
| LweI | GCATC | 8 cut(s) | 207, 260, 462, 875, 915, 1275, 1317, 1342 |
| MaeI | CTAG | 1 cut(s) | 1280 |
| MaeII | ACGT | 2 cut(s) | 1371, 1639 |
| MaeIII | GTNAC | 4 cut(s) | 202, 356, 498, 1635 |
| MalI | GATC | 7 cut(s) | 302, 539, 962, 984, 1100, 1488, 1767 |
| MbiI | CCGCTC | 1 cut(s) | 297 |
| MboI | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| MfeI | CAATTG | 1 cut(s) | 1782 |
| MflI | RGATCY | 1 cut(s) | 1765 |
| MhlI | GDGCHC | 2 cut(s) | 907, 1470 |
| MluCI | AATT | 8 cut(s) | 543, 643, 673, 1221, 1417, 1426, 1684, 1782 |
| MlyI | GAGTC | 2 cut(s) | 321, 1031 |
| MmeI | TCCRAC | 1 cut(s) | 890 |
| Mph1103I | ATGCAT | 1 cut(s) | 1188 |
| MseI | TTAA | 4 cut(s) | 45, 1166, 1250, 1795 |
| MslI | CAYNNNNRTG | 3 cut(s) | 810, 1160, 1293 |
| MspI | CCGG | 1 cut(s) | 714 |
| MspR9I | CCNGG | 2 cut(s) | 337, 1770 |
| MunI | CAATTG | 1 cut(s) | 1782 |
| Mva1269I | GAATGC | 3 cut(s) | 74, 998, 1578 |
| MvaI | CCWGG | 2 cut(s) | 337, 1770 |
| MvnI | CGCG | 2 cut(s) | 1103, 1414 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 219, 257, 458, 1576 |
| NcoI | CCATGG | 2 cut(s) | 708, 1698 |
| NdeI | CATATG | 1 cut(s) | 87 |
| NdeII | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| NlaIV | GGNNCC | 2 cut(s) | 54, 1767 |
| NmuCI | GTSAC | 2 cut(s) | 202, 356 |
| NsiI | ATGCAT | 1 cut(s) | 1188 |
| NspI | RCATGY | 3 cut(s) | 1186, 1190, 1590 |
| NspV | TTCGAA | 1 cut(s) | 1087 |
| PaeI | GCATGC | 1 cut(s) | 1190 |
| PagI | TCATGA | 1 cut(s) | 841 |
| PceI | AGGCCT | 2 cut(s) | 213, 461 |
| PctI | GAATGC | 3 cut(s) | 74, 998, 1578 |
| PfeI | GAWTC | 2 cut(s) | 326, 370 |
| PflFI | GACNNNGTC | 1 cut(s) | 311 |
| PkrI | GCNGC | 7 cut(s) | 292, 467, 600, 658, 1388, 1578, 1696 |
| Ple19I | CGATCG | 1 cut(s) | 303 |
| PleI | GAGTC | 2 cut(s) | 320, 1030 |
| PpsI | GAGTC | 2 cut(s) | 320, 1030 |
| Ppu21I | YACGTR | 1 cut(s) | 1640 |
| Psp6I | CCWGG | 2 cut(s) | 335, 1768 |
| PspGI | CCWGG | 2 cut(s) | 335, 1768 |
| PspN4I | GGNNCC | 2 cut(s) | 54, 1767 |
| PspPI | GGNCC | 1 cut(s) | 1649 |
| PstI | CTGCAG | 1 cut(s) | 1388 |
| PsuI | RGATCY | 1 cut(s) | 1765 |
| PsyI | GACNNNGTC | 1 cut(s) | 311 |
| PvuI | CGATCG | 1 cut(s) | 303 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| RseI | CAYNNNNRTG | 3 cut(s) | 810, 1160, 1293 |
| SaqAI | TTAA | 4 cut(s) | 45, 1166, 1250, 1795 |
| SatI | GCNGC | 7 cut(s) | 291, 466, 599, 657, 1387, 1577, 1695 |
| Sau3AI | GATC | 7 cut(s) | 300, 537, 960, 982, 1098, 1486, 1765 |
| Sau96I | GGNCC | 1 cut(s) | 1649 |
| SchI | GAGTC | 2 cut(s) | 321, 1031 |
| ScrFI | CCNGG | 2 cut(s) | 337, 1770 |
| SduI | GDGCHC | 2 cut(s) | 907, 1470 |
| SfaNI | GCATC | 8 cut(s) | 207, 260, 462, 875, 915, 1275, 1317, 1342 |
| SfcI | CTRYAG | 1 cut(s) | 1384 |
| SfuI | TTCGAA | 1 cut(s) | 1087 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 810, 1160, 1293 |
| SphI | GCATGC | 1 cut(s) | 1190 |
| Sse9I | AATT | 8 cut(s) | 543, 643, 673, 1221, 1417, 1426, 1684, 1782 |
| SseBI | AGGCCT | 2 cut(s) | 213, 461 |
| SspI | AATATT | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 1280 |
| StuI | AGGCCT | 2 cut(s) | 213, 461 |
| StyD4I | CCNGG | 2 cut(s) | 335, 1768 |
| StyI | CCWWGG | 3 cut(s) | 708, 1597, 1698 |
| TaaI | ACNGT | 4 cut(s) | 968, 1118, 1458, 1475 |
| TaiI | ACGT | 2 cut(s) | 1374, 1642 |
| TaqI | TCGA | 7 cut(s) | 299, 324, 740, 834, 923, 1087, 1125 |
| TasI | AATT | 8 cut(s) | 543, 643, 673, 1221, 1417, 1426, 1684, 1782 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TauI | GCSGC | 3 cut(s) | 293, 468, 1697 |
| TfiI | GAWTC | 2 cut(s) | 326, 370 |
| Tru1I | TTAA | 4 cut(s) | 45, 1166, 1250, 1795 |
| Tru9I | TTAA | 4 cut(s) | 45, 1166, 1250, 1795 |
| TseFI | GTSAC | 2 cut(s) | 202, 356 |
| TseI | GCWGC | 4 cut(s) | 598, 656, 1386, 1576 |
| Tsp45I | GTSAC | 2 cut(s) | 202, 356 |
| TspDTI | ATGAA | 8 cut(s) | 150, 627, 794, 947, 1026, 1466, 1719, 1754 |
| TspGWI | ACGGA | 3 cut(s) | 324, 1636, 1686 |
| Tth111I | GACNNNGTC | 1 cut(s) | 311 |
| XapI | RAATTY | 3 cut(s) | 643, 1221, 1684 |
| XceI | RCATGY | 3 cut(s) | 1186, 1190, 1590 |
| XspI | CTAG | 1 cut(s) | 1280 |
| Zsp2I | ATGCAT | 1 cut(s) | 1188 |